CuGenDBv2

Gene ID	Lag0019047
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Nucleic acid-binding, OB-fold
Genome location	chr5:38013774..38022954
RNA-Seq Expression	Lag0019047
Synteny	Lag0019047
Gene Ontology terms	NA
InterPro domains	IPR003750 - Putative RNA methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAB2599584.1 hypothetical protein D8674_009855 [Pyrus ussuriensis x Pyrus communis]

1.7e-04

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK + +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

RXH80382.1 hypothetical protein DVH24_041529 [Malus domestica]

1.7e-04

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK + +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

XP_008390852.2 putative methyltransferase C9orf114 [Malus domestica]

2.9e-04

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK   +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

XP_009364206.1 PREDICTED: putative methyltransferase C9orf114 [Pyrus x bretschneideri]

1.7e-04

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK + +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

XP_034212283.1 putative methyltransferase C9orf114 [Prunus dulcis]

2.2e-04

53.12

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNV
        + L   GMLP LDAPHHLRKHE GP REG+    + PN         PA    VDVGLSK +NV
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNV

TrEMBL top hits

e value

%identity

Alignment

A0A498IE35 Uncharacterized protein

8.1e-05

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK + +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

A0A540MFN3 Uncharacterized protein

3.1e-04

54.39

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKG
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSKG
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKG

A0A5E4GEV3 PREDICTED: putative methyltransferase C9orf114

1.1e-04

53.12

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNV
        + L   GMLP LDAPHHLRKHE GP REG+    + PN         PA    VDVGLSK +NV
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNV

A0A5N5FMT5 Uncharacterized protein

8.1e-05

40.21

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        + L   GMLP LDAPHHLRKHE GP REG+        L+  L      VDVGLSK + +VD+        +V+  + W   A   R    +S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ--KIPSVSKLSFWGHTAKQFRNYCLTSNPKE

A0A6J5W129 Uncharacterized protein

4.0e-04

35.14

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ---------------KIPSVSKLSFWGHTA
        + L   GMLP LDAPHHLRKHE GP REG+    + PN         PA    VDVGLSK + +VD+  +                +P     ++WG+  
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQ---------------KIPSVSKLSFWGHTA

Query:  KQFRNYCLTSN
        +   N     N
Subjt:  KQFRNYCLTSN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G19300.1 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink).

1.1e-06

39.39

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Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQKIPSVSKLSFWGHTAKQFRNYCLTSNPKE
        +DL   GMLP LDAPHHLRKHE    REG+    K PN          +    VDVGLSK + VVD+       V+      H     R     S P+E
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREGM----KKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQKIPSVSKLSFWGHTAKQFRNYCLTSNPKE

Sequences

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CDS sequence

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ATGGCTGCTAAATTTGAGGTGGAGCGTTTCGATGGGGGAGGAGATTTTTCTCTCTGGAAGGCAGAAGATGCGAGCTCTACTCGTTCAGCAGAAGATCGCGACACGCGTCG
CGACGCTGTCTATAGCGTCTCGACGCTATCAGCAGATTTTCTATATAATCTTCTTTTCATGCTACGGCCAAGTATTTCACCATCGCAGCTTCATGGGTTAATCGACGTCG
CCGTTGTTTGTCCATCGTGGATTGTCGCTAATCATCTACTTCGCTTGGATGGTCTTGAAGGTGACAATACTATTAAGCTTGCTATTGATGATGAATGTGTGAGACGGAAC
AAAAAGGTTTTACGATCTGTTTGGGTGATTTTGGTAATAGATGACCTTGTCATTGCTGGGATGTTGCCCCTGCTTGATGCTCCTCACCATTTGCGCAAGCATGAACGGGG
TCCCTGTCGAGAAGGAATGAAGAAGCCAAATTATATTGTCTACTTGATTTCTTGGCTTCCTGCCATTAGTCATTTTGTTGATGTTGGTCTGAGTAAGGGCATGAATGTGG
TGGATAGAACTCAGCAAAAAATTCCTAGTGTTTCTAAGCTTTCATTTTGGGGTCACACTGCAAAACAATTCAGAAATTATTGCTTGACTTCAAATCCAAAGGAAGTTAGT
GAGGTGGGATCCACTTCCATAGGATGTCTAGTGAGTCATGTGGCCGATGATTCGTTGGCACCCATTCAGGAGCTAAGTAGTTCTTTCGATCTTGCTAGGGATGAGCATTT
AGGGGTGAGTTGCATAGATAGTGGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGGTTGTGAGGAAGAAAAAGAAAATGAGCTTGTAGTGTCAGAAGAAGTTC
AGGAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGATGTCTAGTGAGTCATGTGGCCGATGATTCGTTGGCACCCATTCAGGAGCTTAGTTCTTTCGATCTTGCTAGG
GATGAGTATTTGGGGAGTTCCCGTGCTCTTGTCTATGCCAAGCATTCATGA

mRNA sequence

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Protein sequence

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MAAKFEVERFDGGGDFSLWKAEDASSTRSAEDRDTRRDAVYSVSTLSADFLYNLLFMLRPSISPSQLHGLIDVAVVCPSWIVANHLLRLDGLEGDNTIKLAIDDECVRRN
KKVLRSVWVILVIDDLVIAGMLPLLDAPHHLRKHERGPCREGMKKPNYIVYLISWLPAISHFVDVGLSKGMNVVDRTQQKIPSVSKLSFWGHTAKQFRNYCLTSNPKEVS
EVGSTSIGCLVSHVADDSLAPIQELSSSFDLARDEHLGVSCIDSGEELESCSTFQEHGCEEEKENELVVSEEVQEEVSEVGSTSIGCLVSHVADDSLAPIQELSSFDLAR
DEYLGSSRALVYAKHS

Lag0019047 (gene) of Sponge gourd (AG-4) v1 genome