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Lag0019050 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019050
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTetratricopeptide-like helical
Genome locationchr5:38059267..38059662
RNA-Seq ExpressionLag0019050
SyntenyLag0019050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2557.25Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFH--RRCCGKDDGVDGVYCVPVIDFHFRKIIKKRA
        MSVSLEALAMAGI SNEWAMDAEEW RN E+END+PPHLLADED D+D++ +ST S+  FP  GFF   RR   +D G   ++C   I     K ++KRA
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFH--RRCCGKDDGVDGVYCVPVIDFHFRKIIKKRA

Query:  LNCLRSVEIMVRTIVGFLMVMTMKIITLRGS
         N + SV I+VRTI+GFL+V  +KII+   S
Subjt:  LNCLRSVEIMVRTIVGFLMVMTMKIITLRGS

KAG6600647.1 hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3164.12Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN
        MSVSLEALAMAGIDSNE AMDAEEW RN EME +IPPHLLADED +EDE       S KFP T      CC KD+GV GV C P I +H RKI +KR LN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN

Query:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS
        CL S+EI+   +VGFLM MT+KII  + SKS
Subjt:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2657.58Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFF---HRRCCGKDDGVDGVYCVPVIDFHFRKIIKKR
        MSVSLEALAMAGI SNEWAMDAEEW RN E+END+PPHLLADED D+D++ +ST S+  FP  GFF   HR    +D G D ++C   I     K ++KR
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFF---HRRCCGKDDGVDGVYCVPVIDFHFRKIIKKR

Query:  ALNCLRSVEIMVRTIVGFLMVMTMKIITLRGS
        A N + SV I+VRTI+GFL+V  +KII+   S
Subjt:  ALNCLRSVEIMVRTIVGFLMVMTMKIITLRGS

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]1.2e-2257.46Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK
        MSVSLEALAMAGIDSNEW MDA+EW RN   E D +PPHLLADE++DED E  +ST S+  F   G F   RR   +D   DG   +  I +   K+I+K
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK

Query:  RALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK
        RA N + SV I+VRTI+GFLMVMTMKII+ + SK
Subjt:  RALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]2.2e-3466.41Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN
        MSVSLEALAMAGIDSNEWAMDAEEW RN EME DIPPHLLADED++EDE       S KFP T      CC KDDGV GV C P I +H RKI +KR LN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN

Query:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS
        CL S+EI+   +VGFLM MT+KII  + SKS
Subjt:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein1.1e-1083.67Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNT-EMEND--IPPHLLADEDED
        M VSLEALAMAGIDSNEWAMDAEEW  NT +MEND  IPPHLLADEDE+
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNT-EMEND--IPPHLLADEDED

A0A0A0KWE7 Uncharacterized protein1.9e-2356.03Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED---ESFSSTGSSCKFPTTGFFH----RRC---CGKDDGVDGVYCVPVIDFH
        MSVSLEALAMAGIDSNEWAMDAEEW RN   E D +PPHLLADE++DED      +ST S+  FP  G F     R C    G   G+ G++C       
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED---ESFSSTGSSCKFPTTGFFH----RRC---CGKDDGVDGVYCVPVIDFH

Query:  FRKIIKKRALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK
          K+I+KRA N + SV I+VRTI+GFLMVMTMKII+ + SK
Subjt:  FRKIIKKRALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK

A0A5A7TS68 Tetratricopeptide-like helical1.5e-2057.26Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK
        MSVSLEALAMAGIDSNEW MDA+EW RN   E D +PPHLLADE++DED E  +ST S+  F   G F   RR   +D   DG + +  I +   K+I+K
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK

Query:  RALNCLRSVEIMVRTIVGFLMVMT
        RA N + SV I+VRTI+GFLMVMT
Subjt:  RALNCLRSVEIMVRTIVGFLMVMT

A0A5D3CZU0 Tetratricopeptide-like helical5.6e-2357.46Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK
        MSVSLEALAMAGIDSNEW MDA+EW RN   E D +PPHLLADE++DED E  +ST S+  F   G F   RR   +D   DG   +  I +   K+I+K
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMEND-IPPHLLADEDEDED-ESFSSTGSSCKFPTTGFF--HRRCCGKDDGVDGVYCVPVIDFHFRKIIKK

Query:  RALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK
        RA N + SV I+VRTI+GFLMVMTMKII+ + SK
Subjt:  RALNCLRSVEIMVRTIVGFLMVMTMKIITLRGSK

A0A6J1FX98 uncharacterized protein LOC1114478801.1e-3466.41Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN
        MSVSLEALAMAGIDSNEWAMDAEEW RN EME DIPPHLLADED++EDE       S KFP T      CC KDDGV GV C P I +H RKI +KR LN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALN

Query:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS
        CL S+EI+   +VGFLM MT+KII  + SKS
Subjt:  CLRSVEIMVRTIVGFLMVMTMKIITLRGSKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein2.0e-0446.67Show/hide
Query:  LEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDE
        +EALAMAG+D  EW +  EEW      E+ +P HLLAD+ ++E++
Subjt:  LEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCGATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGGGAAGAAATACTGAAATGGAGAACGACATTCCGCC
GCATTTATTAGCCGACGAAGACGAAGACGAAGACGAAAGCTTTTCGAGTACTGGTAGTAGCTGTAAGTTTCCGACCACCGGATTCTTCCACCGTCGTTGCTGCGGAAAAG
ATGACGGTGTTGATGGTGTGTACTGCGTTCCGGTGATCGATTTCCATTTCAGAAAAATCATAAAGAAGAGAGCTCTGAATTGCCTGAGATCAGTGGAAATTATGGTGAGA
ACTATTGTGGGGTTCCTTATGGTGATGACCATGAAGATAATAACTTTACGAGGATCCAAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCGATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGGGAAGAAATACTGAAATGGAGAACGACATTCCGCC
GCATTTATTAGCCGACGAAGACGAAGACGAAGACGAAAGCTTTTCGAGTACTGGTAGTAGCTGTAAGTTTCCGACCACCGGATTCTTCCACCGTCGTTGCTGCGGAAAAG
ATGACGGTGTTGATGGTGTGTACTGCGTTCCGGTGATCGATTTCCATTTCAGAAAAATCATAAAGAAGAGAGCTCTGAATTGCCTGAGATCAGTGGAAATTATGGTGAGA
ACTATTGTGGGGTTCCTTATGGTGATGACCATGAAGATAATAACTTTACGAGGATCCAAGTCCTAA
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSNEWAMDAEEWGRNTEMENDIPPHLLADEDEDEDESFSSTGSSCKFPTTGFFHRRCCGKDDGVDGVYCVPVIDFHFRKIIKKRALNCLRSVEIMVR
TIVGFLMVMTMKIITLRGSKS