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Lag0019067 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019067
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein UPSTREAM OF FLC
Genome locationchr5:38244559..38244947
RNA-Seq ExpressionLag0019067
SyntenyLag0019067
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600637.1 Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2873.5Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK MGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

KAG7031273.1 Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2873.5Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK MGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

XP_023525139.1 protein UPSTREAM OF FLC isoform X1 [Cucurbita pepo subsp. pepo]3.2e-2872.65Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE++GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

XP_023525148.1 protein UPSTREAM OF FLC isoform X2 [Cucurbita pepo subsp. pepo]3.2e-2872.65Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE++GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

XP_038907002.1 protein UPSTREAM OF FLC [Benincasa hispida]2.6e-3075.93Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEE---KGGMKAAGRCIPRMII---
        MAGK +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVV+PVLKKS SYN+EKSKR E+EE+R+G+EE    GG+K  GRC+P MI+   
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEE---KGGMKAAGRCIPRMII---

Query:  -SKQPKKP
         SKQPKKP
Subjt:  -SKQPKKP

TrEMBL top hitse value%identityAlignment
A0A0A0KXS9 Uncharacterized protein2.1e-2567.57Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERR------EGEEEKGGMKAAGRCIPRMII
        M G  M EEEMIKYMSENPR GKLQ EEKEYFSGSIVESIR  EDRHV+ P+L KS SY +EKSKREELEE++      E E E GG+K  GRC+P MI+
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERR------EGEEEKGGMKAAGRCIPRMII

Query:  ----SKQPKKP
            SKQPKKP
Subjt:  ----SKQPKKP

A0A6J1FP61 protein UPSTREAM OF FLC isoform X12.6e-2872.65Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

A0A6J1FUF7 protein UPSTREAM OF FLC isoform X22.6e-2872.65Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        MAGK +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

A0A6J1ISQ2 protein UPSTREAM OF FLC isoform X11.7e-2770.94Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        M G+ +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

A0A6J1IY41 protein UPSTREAM OF FLC isoform X21.7e-2770.94Show/hide
Query:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-
        M G+ +GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIR  EDRHVVEPVLKKS+SYN+EKSKR EL E+R+       EE+ GGMK  GRCIPRMI 
Subjt:  MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERRE------GEEEKGGMKAAGRCIPRMI-

Query:  --------ISKQ-PKKP
                 SKQ PKKP
Subjt:  --------ISKQ-PKKP

SwissProt top hitse value%identityAlignment
Q8GY65 Protein SOSEKI 43.9e-0539.47Show/hide
Query:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEE
        A +G G   + +   E   FG+++ EEKEYFSGS+++   + E    + P LK+S+SYN ++S R  L + +EGEE
Subjt:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEE

Q9FJF5 Protein SOSEKI 59.6e-0437.65Show/hide
Query:  GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR
        GEE + K   E   FG++Q E+KEYFSGS++E+ +E      + P LK+S+SYN ++  R      ++ EE         +CIPR
Subjt:  GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR

Q9LX14 Protein SOSEKI 21.6e-1452.08Show/hide
Query:  EEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR---MIISKQPKK
        E EMI++MSENPRFG  Q EEKEYFSGSIVES+   ++R   EP L++S S+N+E+SK  E+ +  + +EE+   K   +CIPR   M  SKQ KK
Subjt:  EEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR---MIISKQPKK

Arabidopsis top hitse value%identityAlignment
AT2G28150.1 Domain of unknown function (DUF966)9.9e-0441.51Show/hide
Query:  MSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKRE
        +SE P    L+ EEKEYFSGS+VE+  + +D       LK+S+SYN +++  +
Subjt:  MSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKRE

AT3G46110.1 Domain of unknown function (DUF966)2.8e-0639.47Show/hide
Query:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEE
        A +G G   + +   E   FG+++ EEKEYFSGS+++   + E    + P LK+S+SYN ++S R  L + +EGEE
Subjt:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEE

AT3G46110.2 Domain of unknown function (DUF966)7.6e-0437.1Show/hide
Query:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEK
        A +G G   + +   E   FG+++ EEKEYFSGS+++   + E    + P LK+S+SYN ++
Subjt:  AGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEK

AT5G10150.1 Domain of unknown function (DUF966)1.1e-1552.08Show/hide
Query:  EEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR---MIISKQPKK
        E EMI++MSENPRFG  Q EEKEYFSGSIVES+   ++R   EP L++S S+N+E+SK  E+ +  + +EE+   K   +CIPR   M  SKQ KK
Subjt:  EEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR---MIISKQPKK

AT5G59790.1 Domain of unknown function (DUF966)6.8e-0537.65Show/hide
Query:  GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR
        GEE + K   E   FG++Q E+KEYFSGS++E+ +E      + P LK+S+SYN ++  R      ++ EE         +CIPR
Subjt:  GEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAAAAGGGATGGGAGAAGAGGAGATGATAAAGTATATGTCGGAGAATCCGAGGTTCGGGAAGTTGCAGACGGAGGAGAAGGAGTATTTCAGTGGCTCCATTGT
CGAGTCCATTAGAGAAGGAGAAGATCGACATGTCGTGGAACCGGTGCTCAAGAAATCCACCTCCTATAACCAAGAAAAGAGCAAGAGAGAAGAGTTAGAAGAACGGAGAG
AAGGAGAAGAAGAGAAGGGTGGAATGAAAGCAGCAGGAAGGTGCATTCCTCGAATGATAATATCAAAGCAACCCAAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAAAAGGGATGGGAGAAGAGGAGATGATAAAGTATATGTCGGAGAATCCGAGGTTCGGGAAGTTGCAGACGGAGGAGAAGGAGTATTTCAGTGGCTCCATTGT
CGAGTCCATTAGAGAAGGAGAAGATCGACATGTCGTGGAACCGGTGCTCAAGAAATCCACCTCCTATAACCAAGAAAAGAGCAAGAGAGAAGAGTTAGAAGAACGGAGAG
AAGGAGAAGAAGAGAAGGGTGGAATGAAAGCAGCAGGAAGGTGCATTCCTCGAATGATAATATCAAAGCAACCCAAGAAGCCTTGA
Protein sequenceShow/hide protein sequence
MAGKGMGEEEMIKYMSENPRFGKLQTEEKEYFSGSIVESIREGEDRHVVEPVLKKSTSYNQEKSKREELEERREGEEEKGGMKAAGRCIPRMIISKQPKKP