CuGenDBv2

Gene ID	Lag0019085
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	transcription factor MYC2-like
Genome location	chr5:38456156..38456581
RNA-Seq Expression	Lag0019085
Synteny	Lag0019085
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650027.1 hypothetical protein Csa_009708 [Cucumis sativus]

1.5e-47

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNP+K    T  ATT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

XP_004148739.1 transcription factor MYC2 [Cucumis sativus]

1.5e-47

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNP+K    T  ATT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

XP_008448683.1 PREDICTED: transcription factor MYC2-like [Cucumis melo]

8.5e-48

76.67

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNPSK T A    TT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

XP_023540436.1 transcription factor MYC4-like [Cucurbita pepo subsp. pepo]

3.5e-33

66.43

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Query:  MNKVKIL-KFNNLETGSWQSGT---TAADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNLS
        MNKVK L  FNNLETGSWQSGT   T ADEGENDPSSLWIS+PSSTIEMKDSITTTV S GA  KPIHSENPS SSLTEN    Q PS        LN  
Subjt:  MNKVKIL-KFNNLETGSWQSGT---TAADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNLS

Query:  DYGFKSNPSKTTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQ
        DY          AA  TT PSFK ES GML+F N SLFS +SQ
Subjt:  DYGFKSNPSKTTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQ

XP_038904169.1 transcription factor MYC2-like [Benincasa hispida]

2.4e-50

78.52

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPS+  P KPIHSENPS SSLTEN+ AIQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSKTT---AATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNPSKTT   A TTTTTP FKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSKTT---AATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3Z0 Transcription factor AtMYC2

7.1e-48

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNP+K    T  ATT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSK----TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

A0A1S3BL58 transcription factor MYC2-like

4.1e-48

76.67

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNPSK T A    TT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

A0A5D3CHR8 Transcription factor MYC2-like

4.1e-48

76.67

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Query:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW SGTT    AADEGENDPSS+WIS+PSSTIEMKDSITTTVPSS  P KPI SENPS SSLTEN+  IQQ S  KQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTT----AADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNPSK T A    TT+TTPSFKPES GMLNF N SLFS HSQY+
Subjt:  SDYGFKSNPSKTTAA----TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

A0A6J1GDR7 transcription factor MYC2-like

1.9e-32

65.03

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Query:  MNKVKIL-KFNNLETGSWQSGT---TAADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNLS
        MNKVK L  FNNLETGSWQSGT   T ADEGENDPSSLWIS+PS+TIEMKDSITTTV S GA  KPIHSENPS SSLTEN    Q PS        LN  
Subjt:  MNKVKIL-KFNNLETGSWQSGT---TAADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNLS

Query:  DYGFKSNPSKTTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQ
        DY          AA   T PSFK ES GML+F N SLFS +SQ
Subjt:  DYGFKSNPSKTTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQ

A0A6J1L5U7 transcription factor MYC2-like

3.2e-32

62.5

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Query:  MNKVKIL-KFNNLETGSWQSGTTA----ADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL
        MNKVKIL  FNNLET SW S TTA    ADEGENDPSS+WIS+PSST      I TTVPS   P K   SEN             QQ S QKQSQSFLN 
Subjt:  MNKVKIL-KFNNLETGSWQSGTTA----ADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNL

Query:  SDYGFKSNPSK------TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI
        SDYGF+SNPSK      TT  TTT TPSFKPES GMLNF + +LFSSH+QYI
Subjt:  SDYGFKSNPSK------TTAATTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

SwissProt top hits

e value

%identity

Alignment

A0A060KY90 Transcription factor MYC1

1.4e-05

35.57

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Query:  MNKVKILKFNNLE----TGSWQSGTTAADEGENDPSSLWISDPSST-IEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSF---
        MNKVK L   N++    TGS     + A   E DPS+LW++DPSS+ +E KDS+             IHS +  +  +    G     +QQ+  Q F   
Subjt:  MNKVKILKFNNLE----TGSWQSGTTAADEGENDPSSLWISDPSST-IEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSF---

Query:  -LNLSDYGFKSNPSKTTAATTTTTPSFKPESVGMLNF-DNDSLFSSHSQ
         LN S YGF  + ++       T  S KPES  +LNF D+   FS  SQ
Subjt:  -LNLSDYGFKSNPSKTTAATTTTTPSFKPESVGMLNF-DNDSLFSSHSQ

A0A3Q7HRZ6 Transcription factor MYC2

1.9e-05

33.54

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Query:  MNKVKIL--KFNNLETGSWQSGTTAADEGENDPSSLWISDPSST-IEMKDSI----TTTVPSSGAPTKPIH-SENPSLSSLTENLGAIQQPSQ--QKQSQ
        MNKV++L    N+L +GSW      A + E+DPS+LW++DPSS+ +E+++S+    T +VPSS +  +  + +EN   S   ++    QQ     Q+Q+Q
Subjt:  MNKVKIL--KFNNLETGSWQSGTTAADEGENDPSSLWISDPSST-IEMKDSI----TTTVPSSGAPTKPIH-SENPSLSSLTENLGAIQQPSQ--QKQSQ

Query:  SF----LNLSDYGFKSNPSKTTAATTTTTPSFKPESVGMLNFD----------NDSLFSSHSQY
         F    LN S++GF  + ++       ++ S KPES  +LNF           N +LF+  SQ+
Subjt:  SF----LNLSDYGFKSNPSKTTAATTTTTPSFKPESVGMLNFD----------NDSLFSSHSQY

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAACAAGGTCAAGATTCTCAAATTCAACAATCTCGAAACGGGTTCTTGGCAATCGGGAACCACCGCCGCCGACGAAGGGGAAAACGACCCGTCTTCGTTGTGGATCAG
TGATCCGTCGAGCACAATCGAGATGAAGGATTCGATTACCACTACCGTCCCTTCCTCTGGAGCTCCGACGAAGCCAATCCATTCGGAAAATCCAAGTTTGAGCAGCTTAA
CGGAAAATCTCGGCGCGATTCAACAACCATCCCAACAAAAACAGAGCCAAAGCTTCTTGAATTTATCCGATTATGGCTTCAAATCGAATCCCTCAAAGACCACGGCCGCC
ACCACCACCACCACCCCATCATTCAAGCCAGAATCCGTGGGGATGCTGAACTTCGACAACGACAGCCTCTTCTCCAGCCATTCACAGTACATATAA

mRNA sequence

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Protein sequence

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MNKVKILKFNNLETGSWQSGTTAADEGENDPSSLWISDPSSTIEMKDSITTTVPSSGAPTKPIHSENPSLSSLTENLGAIQQPSQQKQSQSFLNLSDYGFKSNPSKTTAA
TTTTTPSFKPESVGMLNFDNDSLFSSHSQYI

Lag0019085 (gene) of Sponge gourd (AG-4) v1 genome