; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019091 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019091
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:38523127..38524395
RNA-Seq ExpressionLag0019091
SyntenyLag0019091
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMP03234.1 hypothetical protein COLO4_10561 [Corchorus olitorius]1.3e-3534.95Show/hide
Query:  VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNET
        VWK   G+ +  +G+ L++   +SE+ ++++  +GPW F+  L++LK    F   E++  E   FW+Q H LPLG   E+V + +G   G +  +DT   
Subjt:  VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNET

Query:  DECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSWMRAATPPRRNRFHTNDRGYE
           WG+FLR+R  + +N+PL R + L     GKIL   +YE+LPDFCY CG L+H +  C    +      K +K++G W+RA   PR N    +  G  
Subjt:  DECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSWMRAATPPRRNRFHTNDRGYE

Query:  GLRGGR
          R G+
Subjt:  GLRGGR

XP_023888198.1 uncharacterized protein LOC112000324 [Quercus suber]1.6e-3637.19Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        +K +W+  +   + ++  N+ LI   +E+   KIL +GPW FD +LI L  P+  +  +D  F+ A+FWVQ H+LPL   N   A+ +GS LG +++VD 
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRA--ATPPRRNRFHT
        + T EC GR +R+RV + I +PLCR   ++ G TG +    +YER+P FCY+CG+++H++  C       +   K  +Q+G W+RA  A P +    HT
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRA--ATPPRRNRFHT

XP_023926510.1 uncharacterized protein LOC112037926 [Quercus suber]4.5e-3637.19Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        +K +W+  +   + ++  N  LI   +E+   KIL +GPW FD +LI L  P+  +  +D  F+ A+FWVQ H+LPL   N   A+ +GS LG +++VD 
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRA--ATPPRRNRFHT
        + T EC GR +R+RV + I +PLCR   ++ G TG +    +YER+P FCY+CG+++H++  C       +   K  +Q+G W+RA  A P +    HT
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRA--ATPPRRNRFHT

XP_038708494.1 uncharacterized protein LOC120003548 [Tripterygium wilfordii]2.9e-3534.51Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        MK +WK  RG+    VG+NL+L+   S+   +K+LD  PW FD H +LLK       P D+VFEE   WV+F++LP  + NE V   LG+ +G I++VD 
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNRFHTNDRGYE
        +     WG++LRVR+++ I +PL R + + G   G  + V ++YERLP+FCY CG L H D  C   + +    K +G W+R++ P  R    ++D    
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNRFHTNDRGYE

Query:  GLRGGRGRFGQRQRWRQPWRSNAEKEEANNGDSGDLKKSDESDDERQPKHHLRPPTAPDSG-----DTSLQSMPSTKITGNKCS
               R  QR+          E  ++   D GD K S+    E Q K    P    D G     + +L    S  IT +K S
Subjt:  GLRGGRGRFGQRQRWRQPWRSNAEKEEANNGDSGDLKKSDESDDERQPKHHLRPPTAPDSG-----DTSLQSMPSTKITGNKCS

XP_038716189.1 uncharacterized protein At4g02000-like [Tripterygium wilfordii]7.7e-3641.36Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        MK +WK  RG+ I  VG+NL+L++  S+   +K+LD  PW FD H +LLK       P D+VFEE   WV+F +LP  + NE V   LG+ +G I++VD 
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNR
        +     WG++LRVR+ + I +PL R + + G   G  + V ++YERLP+FCY CG L H D  C   +      K +G W+R ++PPR  R
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNR

TrEMBL top hitse value%identityAlignment
A0A1R3GTB5 Reverse transcriptase1.6e-3431.85Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        M  VWK   G+ +  +G+NLF+   +S+L ++++  + PW F+  L++LK    +D  ED+  +  +FW Q H LPLG  NE++ + +G   GT++ +DT
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPE----KQFGSWMRAATPPRRNRFHTNDR
              WG+FLR R ++ + +PL R + L     GKIL   +YE+LPDFCY CG L H +  C    V  + +    K++G W+RA   PR      +  
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPE----KQFGSWMRAATPPRRNRFHTNDR

Query:  GYEGLRGGR----------GRFGQRQRWRQPWRSNAEKEEANNGDSGDLKK-----SDESDDERQPKHHL
        G    R GR           R G+  + R+       K   +N DS D +      S  + ++   KHH+
Subjt:  GYEGLRGGR----------GRFGQRQRWRQPWRSNAEKEEANNGDSGDLKK-----SDESDDERQPKHHL

A0A1R3K847 Uncharacterized protein6.4e-3634.95Show/hide
Query:  VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNET
        VWK   G+ +  +G+ L++   +SE+ ++++  +GPW F+  L++LK    F   E++  E   FW+Q H LPLG   E+V + +G   G +  +DT   
Subjt:  VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNET

Query:  DECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSWMRAATPPRRNRFHTNDRGYE
           WG+FLR+R  + +N+PL R + L     GKIL   +YE+LPDFCY CG L+H +  C    +      K +K++G W+RA   PR N    +  G  
Subjt:  DECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSWMRAATPPRRNRFHTNDRGYE

Query:  GLRGGR
          R G+
Subjt:  GLRGGR

A0A2N9E949 CCHC-type domain-containing protein3.9e-3337.5Show/hide
Query:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT
        M   W+  +G  + ++GDNLF+      + RD +L  GPW FD +L+LLK        + M   EA+FW+Q H LP    NE  A ++G+ LG ++ +D 
Subjt:  MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDT

Query:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRAATPPRR
         E    WG F+RV+V++ ++ PL R   +  G    I   +KYE+LP FCY CG+L H++  C     H K +     ++GSW+R ATP RR
Subjt:  NETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQFGSWMRAATPPRR

A0A2N9F689 Uncharacterized protein8.6e-3336.13Show/hide
Query:  MKGVWK--FCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRV
        M  +WK    RG+   ++GDNLFL     +  ++ +L   PWCFD  L++LK         ++  +EA FWVQ + LP+      V + +G  +GT++ V
Subjt:  MKGVWK--FCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRV

Query:  DTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSK-------PEKQFGSWMRA
        +       WGRFLRVRV++ + +PL R   +  G    IL   +YERLP+FC+YCG LDH +  C  +++++K        E Q+G W+RA
Subjt:  DTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSK-------PEKQFGSWMRA

A0A6J1BSZ1 uncharacterized protein LOC1110054811.3e-3340.76Show/hide
Query:  MKGVWKF-CRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVD
        +K  WK  C+  ++D +G N+FL N      R++IL  GPW FD  LI++  P +   P DM F   + WV F  L L   N+T+A  LG+ +G  + V+
Subjt:  MKGVWKF-CRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVD

Query:  TNETDECWGRFLRVRVKMKINEPLCRSLTLN-GGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEK-QFGSWMR
        +N  + CWG  LRVRV+  + +PL R + LN  GP G     I+YERLPDF Y+CG LDH    C    V S  +  Q+G W+R
Subjt:  TNETDECWGRFLRVRVKMKINEPLCRSLTLN-GGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEK-QFGSWMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein3.4e-1332.58Show/hide
Query:  DKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNG
        + +L  GPW F+D +ILL+       P+  +F    FWVQ   +P    N  V + +G  LG +   D N        F RV +   I  PL        
Subjt:  DKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNG

Query:  GPTGKILTVIKYERLPDFCYYCGMLDHNDGSC
              L   +YERL  FC  CGML H+ G+C
Subjt:  GPTGKILTVIKYERLPDFCYYCGMLDHNDGSC

AT3G42140.1 zinc ion binding;nucleic acid binding7.8e-1027.66Show/hide
Query:  QSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCR
        QSE     IL  GPW F+D + +++  T   L  D  F+   FW+Q   +PL      +  ++G R+G    ++TN                        
Subjt:  QSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCR

Query:  SLTLNGGPTGKILTVIK--YERLPDFCYYCGMLDHNDGSCP
                 G+ ++V+K  YE+L +FC  CGML H+   CP
Subjt:  SLTLNGGPTGKILTVIK--YERLPDFCYYCGMLDHNDGSCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGA
GGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATC
ACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTC
CTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACC
GGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAA
CTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCT
AATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACC
CGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTG
CAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATA
TGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCA
AAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTA
ATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGA
GGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATC
ACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTC
CTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACC
GGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAA
CTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCT
AATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACC
CGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTG
CAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATA
TGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCA
AAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTA
ATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA
Protein sequenceShow/hide protein sequence
MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRF
LRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNRFHTNDRGYEGLRGGRGRFGQRQRWRQPWRS
NAEKEEANNGDSGDLKKSDESDDERQPKHHLRPPTAPDSGDTSLQSMPSTKITGNKCSFSFDNATSMVSLPVPADGVIHGKEKGEINGLTEKSGEETVHLKRTGENQGEI
WGRNDVEGKLGQGGSVGKIKFGGANPNITNQTTQPVQKMSKPSHPNTQNNTTQPMEADQDSNSILRPTIGDPTNDAPTLGLKPEILLGNCGK