| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 5.7e-73 | 95.21 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLFDD+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EG+KILMVLSPTLNYDGAPVT YSGQ GKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 2.8e-72 | 95.17 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLF+DVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EGEKILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| XP_022942165.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 1.8e-71 | 94.48 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLFDD+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EG+KILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMH KLYKL+D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDPLHC KFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 4.3e-73 | 95.21 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M E+LFDD+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EG+KILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
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| XP_038901286.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Benincasa hispida] | 5.3e-71 | 93.06 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLFDD+F VKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EGEKILMVLSPTLNYDGAPVTSY+GQ GKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
+GSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRK
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1C3H4 DNA-directed RNA polymerases II and V subunit 8A-like | 8.3e-70 | 91.03 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
MVELLFDD+FKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPI+EGEKILMVLSPTLNYDGAPV S+S Q GKKSLADKFEY+MHGKLYKLS+
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 1.4e-72 | 95.17 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLF+DVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EGEKILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| A0A6J1FVR2 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 8.8e-72 | 94.48 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLFDD+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EG+KILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMH KLYKL+D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDPLHC KFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 1.4e-72 | 95.17 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ELLF+DVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EGEKILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| A0A6J1J6Q9 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 2.1e-73 | 95.21 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M E+LFDD+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPI+EG+KILMVLSPTLNYDGAPVTSYSGQ GKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKLT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 8.9e-29 | 41.38 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ++FDD+F VK V+PDGKK+D+VSR +E M +++D+N++IYP+++ +K +VL+ TL DG + ++EY+M+GK+Y+L D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
+ SG+D ++ YASFGGL M LKG+ ++ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 3.7e-43 | 58.45 | Show/hide |
Query: LLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSDEGS
+LF+D+F V ++PDGKK+DKV+R++A S L M+M LDVNTE+YP+ G+K + L+PTLN DG P T Y G KK+LADK+EYIMHGKLYK+S E
Subjt: LLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL M+LKGDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 8.1e-30 | 42.07 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M ++FDD+FKVK V+PDGKK+D+VSR +E M +++D+N++IYP+++ +K+ +VL+ TL DG + ++EY+M+GK+Y+L D
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
+ +G+D K+ YASFGGL M LKG+ ++ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
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| Q54YW8 DNA-directed RNA polymerases I, II, and III subunit rpabc3 | 1.2e-28 | 45.14 | Show/hide |
Query: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
M +LF+D F+VK ++PDGKK+D+VSR SE M + +D+ T IYP+ E+ MVL+ +LN DG+ S S K SLADK++Y+M+GK++K
Subjt: MVELLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
E S S KV V+ASFGGL ++L+GDP + +D ++LL++K
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 2.9e-43 | 57.75 | Show/hide |
Query: LLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSDEGS
++F+D+F V ++PDGKK+DKV+R+EARS L M+M LDVNTE+YP+ G+K + ++PTLN DG P T Y G KK+LADK+EYIMHGKLYK+S E
Subjt: LLFDDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIEEGEKILMVLSPTLNYDGAPVTSYSGQGGKKSLADKFEYIMHGKLYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL M+L+GDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRVDQNMFLLLRKL
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