; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019110 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019110
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr5:38698960..38699505
RNA-Seq ExpressionLag0019110
SyntenyLag0019110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]5.9e-2643.95Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-------------------------GAKSPILTLETLKGLKVKTLL
        MLAK SWR+++ P+SLLAK LRGKYFK  +F  A +G   S  WRSI+WGRDL                          G  SP+ T   ++   V  L+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-------------------------GAKSPILTLETLKGLKVKTLL

Query:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI
        +   RW E K++E+FI ++A  IL  PL   +  DEIIW  DK GIFSVRSAY L I
Subjt:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]1.4e-2235.56Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL----------GAKSPILTLETL---------------KGLKVKTLL
        +LAK  WRL+++P SL+AK+++ +Y+K+ +F NA VG++ S  WRSI+WGR +L          G K  I     +                G KV  L+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL----------GAKSPILTLETL---------------KGLKVKTLL

Query:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL
          N +W ES I ++F + DA  I +I L     +DEIIW +D+KG++SV+S YQLA+ +  P     ++    ++EW+ L
Subjt:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]6.8e-2235.19Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL----------GAK---------------SPILTLETLKGLKVKTLL
        ++AK +WRL++ PNSL++++L+ +YF++ +F  A  G NAS  WRSI+WGR ++          G K                PI  L       V  L+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL----------GAK---------------SPILTLETLKGLKVKTLL

Query:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSP
          +N+W E K++++F+  D ++IL IPL     +DE++W +DK+G +SV+S YQLA+    P
Subjt:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSP

XP_030479238.1 uncharacterized protein LOC115696478 [Cannabis sativa]1.0e-2238.2Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPILTLETLKGL-KVKTLLD
        MLAK +WR++ +PNSLL  IL+ KYFK  NF  A +G+  S TW S+IWGRDLL                       G K P L    L    KV   +D
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPILTLETLKGL-KVKTLLD

Query:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKK
        ++  W   K+++ F +     IL IP+GG    D +IW+ +  GIFSV+SAY +A   S P     S+   L K W K
Subjt:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKK

XP_030502714.1 uncharacterized protein LOC115717884 [Cannabis sativa]6.8e-2235.26Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDL--------LGAKSPILTLE----------------TLKGLKVKTLLD
        ML K +W+++K PNSLL ++L+ +YF + +   A  G+N S  WRSI+WGRDL        +G    ILT++                     K+   + 
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDL--------LGAKSPILTLE----------------TLKGLKVKTLLD

Query:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI
        D+  W  +K++ +F ++D  DIL +P+ G + KD+IIWS +  G+F+V+SAY LA+
Subjt:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI

TrEMBL top hitse value%identityAlignment
A0A1S8AC01 Ribonuclease H-like superfamily protein2.5e-2235Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKS-------------------------PILTLETLKGLKVKTLL
        ++AK  WRL++ P+SL A++L  KYFK  +F NA +G+N S  WRSIIWGR ++ A S                         P       +   V  L+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKS-------------------------PILTLETLKGLKVKTLL

Query:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL
        DD+N+W E KI  +F + DA  I+++PL      D+I+W +DKKG +SV+S YQ+A+ +  P   L S+ +    +W+ +
Subjt:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL

A0A6J1DRA0 uncharacterized protein LOC1110224232.9e-2643.95Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-------------------------GAKSPILTLETLKGLKVKTLL
        MLAK SWR+++ P+SLLAK LRGKYFK  +F  A +G   S  WRSI+WGRDL                          G  SP+ T   ++   V  L+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-------------------------GAKSPILTLETLKGLKVKTLL

Query:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI
        +   RW E K++E+FI ++A  IL  PL   +  DEIIW  DK GIFSVRSAY L I
Subjt:  DDNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAI

A0A803PV88 Uncharacterized protein1.2e-2135.59Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPILTLETLKGLK-VKTLLD
        MLAK +WR++ +P SLLA +L+ KYF   +F  A +G++ S TW S++WGRDLL                         KSP L    L  ++ V   +D
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPILTLETLKGLK-VKTLLD

Query:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWK
            W   K+   F     S IL +P+GG +  D ++W HD  G+F+V+SAY LA   S P     SNP      WK
Subjt:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWK

A0A803QCJ3 Uncharacterized protein8.6e-2339.35Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETLKGLKVKTLLDDNNRWMESKIKENFIQADASDILN
        MLA  +WR+  +P SLLA +L+ KYF+   F  A +G++ S TW S++WGRDLL           L+   V   +DD   W   K+   F     S IL 
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETLKGLKVKTLLDDNNRWMESKIKENFIQADASDILN

Query:  IPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL
        +P+GG    D ++W+H+  GIFSV SAY LA   S P     SNP      WK L
Subjt:  IPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL

A0A803QI38 Uncharacterized protein2.1e-2439.33Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPIL-TLETLKGLKVKTLLD
        MLAK +WR++ +P SLLA IL+ KYFK  NF  A +G+  S TW S+IWGRDLL                       G K P L + +     KV   +D
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLL-----------------------GAKSPIL-TLETLKGLKVKTLLD

Query:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKK
        ++  W   K+++ F +   S IL IP+GGP   D +IW+ D  GIFSV+SAY +A   S P     S+   L+K W K
Subjt:  DNNRWMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKK

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.7e-0739.76Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETL-KGLKVKTLLDDNNRWM
        +LAK S+R+I  P++LL+++LR +YF   +    +VG   S  WRSII GR+LL        L T+  G+  K  LD   RW+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETL-KGLKVKTLLDDNNRWM

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein5.0e-0727.74Show/hide
Query:  LRGKYFKDRNFFNATVGNNASLTWRSIIWG--------RDLLG----------------AKSPILTLETLKGLKVKTLLDDNNR---WMESKIKENFIQA
        ++ +YFKD +  +A V    S  W S++ G        R L+G                   P+ T ET K + +  L +       W +SKI +   Q+
Subjt:  LRGKYFKDRNFFNATVGNNASLTWRSIIWG--------RDLLG----------------AKSPILTLETLKGLKVKTLLDDNNR---WMESKIKENFIQA

Query:  DASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQL
        D   I  I L      D+IIW+++  G ++VRS Y L
Subjt:  DASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAYQL

AT4G29090.1 Ribonuclease H-like superfamily protein1.2e-1126.56Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRS----------------------IIWGRDLLGAK--SPILTLETLKG--------
        +L K  WR++  P SL+AK+ + +YF   +  NA +G+  S  W+S                      IIW    L +K  S  L ++ +          
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRS----------------------IIWGRDLLGAK--SPILTLETLKG--------

Query:  -LKVKTLLDDNNR-WMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAY----QLAILVSSPVEILVSNPKPL-AKEWK
         LKV  L+D++ R W +  I+  F + +   I  +  GG  + D   W +   G ++V+S Y    Q+    SSP E+   +  P+  K WK
Subjt:  -LKVKTLLDDNNR-WMESKIKENFIQADASDILNIPLGGPNVKDEIIWSHDKKGIFSVRSAY----QLAILVSSPVEILVSNPKPL-AKEWK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0839.76Show/hide
Query:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETL-KGLKVKTLLDDNNRWM
        +LAK S+R+I  P++LL+++LR +YF   +    +VG   S  WRSII GR+LL        L T+  G+  K  LD   RW+
Subjt:  MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETL-KGLKVKTLLDDNNRWM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCCAAAACAAGTTGGAGACTAATTAAAGATCCGAATAGCCTCCTAGCCAAAATTCTAAGAGGAAAATACTTCAAAGACCGAAACTTTTTTAATGCCACTGTTGG
GAATAATGCTTCTCTTACGTGGAGAAGCATAATTTGGGGAAGAGATCTATTGGGGGCTAAGTCTCCCATCCTCACTCTAGAGACTTTGAAAGGACTTAAGGTCAAAACCC
TCCTAGATGATAATAACAGGTGGATGGAGAGCAAAATTAAGGAGAATTTCATCCAAGCTGACGCTTCAGATATTCTCAATATTCCTCTAGGGGGCCCTAATGTGAAGGAT
GAAATCATTTGGAGTCATGACAAAAAGGGGATATTCTCGGTTAGGAGTGCTTATCAGTTGGCGATTTTAGTCTCTTCCCCTGTTGAGATTTTGGTTTCGAATCCTAAACC
TCTTGCTAAAGAGTGGAAGAAGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCCAAAACAAGTTGGAGACTAATTAAAGATCCGAATAGCCTCCTAGCCAAAATTCTAAGAGGAAAATACTTCAAAGACCGAAACTTTTTTAATGCCACTGTTGG
GAATAATGCTTCTCTTACGTGGAGAAGCATAATTTGGGGAAGAGATCTATTGGGGGCTAAGTCTCCCATCCTCACTCTAGAGACTTTGAAAGGACTTAAGGTCAAAACCC
TCCTAGATGATAATAACAGGTGGATGGAGAGCAAAATTAAGGAGAATTTCATCCAAGCTGACGCTTCAGATATTCTCAATATTCCTCTAGGGGGCCCTAATGTGAAGGAT
GAAATCATTTGGAGTCATGACAAAAAGGGGATATTCTCGGTTAGGAGTGCTTATCAGTTGGCGATTTTAGTCTCTTCCCCTGTTGAGATTTTGGTTTCGAATCCTAAACC
TCTTGCTAAAGAGTGGAAGAAGCTATGA
Protein sequenceShow/hide protein sequence
MLAKTSWRLIKDPNSLLAKILRGKYFKDRNFFNATVGNNASLTWRSIIWGRDLLGAKSPILTLETLKGLKVKTLLDDNNRWMESKIKENFIQADASDILNIPLGGPNVKD
EIIWSHDKKGIFSVRSAYQLAILVSSPVEILVSNPKPLAKEWKKL