; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019141 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019141
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC5
Genome locationchr5:39060499..39068418
RNA-Seq ExpressionLag0019141
SyntenyLag0019141
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR006886 - DNA-directed RNA polymerase III subunit Rpc5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136590.1 DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia]1.7e-18784.25Show/hide
Query:  SHLELGIQPTIIDSRCWPSQ--LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQ
        S L    Q +++  +  P Q  +S  DYM+SLCPGA TSS K +GPSKRYLLSLSL+ERIKKLLSEGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQ VQ
Subjt:  SHLELGIQPTIIDSRCWPSQ--LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQ

Query:  GLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITN
        GLWV KSSFLLPQDG GRCARDFVL LFSKNP+++SSQINVPKSLRDK KHFLNLF VERPAFKDWKF+EKTDRSFLNNYLDIVQKQEK+WRSVEEGITN
Subjt:  GLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITN

Query:  SFRGSVKSVPQANAATGKPELVPKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVA
        SFRGSVKS   ANAATGKP++VPK EKQVS +KATTKSS+A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VA
Subjt:  SFRGSVKSVPQANAATGKPELVPKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVA

Query:  AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        AAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQL RGRGPKA LK+ADV  AS+RELGR +NSNEY+KVMNEICVSHGSSWVLKSG
Subjt:  AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

XP_022929283.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata]1.8e-18989.42Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDY+DSLCPGAS+S NK KGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVLSLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQV H+KA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK+II QVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGS+W LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

XP_022985072.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima]8.0e-19089.68Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDY+DSLCPGAS+S NK KGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVLSLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQV H+KA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK+II QVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

XP_023552355.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo]4.4e-18888.89Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDY+DSLCPGAS+S NK KGPSKR+LLSLSLEERIKKLL+EGPPI+RFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVLSLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQV H+KA+TKSSNAALNR+STMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK+II QVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSS EHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

XP_038876785.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida]3.1e-18688.1Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S  DYMDSLCPG STSSNK KGPSKRYLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQSVQGLWVPKSS LLPQD SGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVL+LFSKNPVV+SSQINVPKSLR+KVKHFLNLFGVERPAFKDWKFKEKTD  FL+NY+D+VQKQEK+WRSVEEGI+  F GS KSV  ANAATGKP++V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
         KPEKQVS++KAT KSSNAALNRKSTMSDETREALPKALQKLF NHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELKKIISQVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR + SNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

TrEMBL top hitse value%identityAlignment
A0A5A7TMP0 DNA-directed RNA polymerase III subunit RPC5 isoform X11.5e-17884.39Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDYMDSLCPG STSSNK KGPSK+YLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EF+E+LQQYAQ VQGLWVPKS FL+PQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVL LFSKNPVV+SSQINVPKSLRD+VKHFLNLFGVERPAFKDWKFKEKTD SFL+N++ IVQKQE+ W ++E+ +   F  S+KS P   A TGKP++V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQVS +K TTKSSNA LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPP+ELKKIISQVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

A0A5D3CZA9 DNA-directed RNA polymerase III subunit RPC5 isoform X11.5e-17884.39Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDYMDSLCPG STSSNK KGPSK+YLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EF+E+LQQYAQ VQGLWVPKS FL+PQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVL LFSKNPVV+SSQINVPKSLRD+VKHFLNLFGVERPAFKDWKFKEKTD SFL+N++ IVQKQE+ W ++E+ +   F  S+KS P   A TGKP++V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQVS +K TTKSSNA LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPP+ELKKIISQVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

A0A6J1C4C6 DNA-directed RNA polymerase III subunit RPC58.1e-18884.25Show/hide
Query:  SHLELGIQPTIIDSRCWPSQ--LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQ
        S L    Q +++  +  P Q  +S  DYM+SLCPGA TSS K +GPSKRYLLSLSL+ERIKKLLSEGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQ VQ
Subjt:  SHLELGIQPTIIDSRCWPSQ--LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQ

Query:  GLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITN
        GLWV KSSFLLPQDG GRCARDFVL LFSKNP+++SSQINVPKSLRDK KHFLNLF VERPAFKDWKF+EKTDRSFLNNYLDIVQKQEK+WRSVEEGITN
Subjt:  GLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITN

Query:  SFRGSVKSVPQANAATGKPELVPKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVA
        SFRGSVKS   ANAATGKP++VPK EKQVS +KATTKSS+A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VA
Subjt:  SFRGSVKSVPQANAATGKPELVPKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVA

Query:  AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        AAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQL RGRGPKA LK+ADV  AS+RELGR +NSNEY+KVMNEICVSHGSSWVLKSG
Subjt:  AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

A0A6J1EMD6 DNA-directed RNA polymerase III subunit RPC5 isoform X18.6e-19089.42Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDY+DSLCPGAS+S NK KGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVLSLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQV H+KA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK+II QVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGS+W LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

A0A6J1JCH8 DNA-directed RNA polymerase III subunit RPC5 isoform X13.9e-19089.68Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S HDY+DSLCPGAS+S NK KGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV
        FVLSLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+V
Subjt:  FVLSLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELV

Query:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE
        PKPEKQV H+KA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK+II QVATE
Subjt:  PKPEKQVSHEKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG
        IHGLYVLTSSPEHPEYDPLRKVVIQL RGRGPKA LK+ADV  AS+RELGR +NSNEYSKVMNEICVSHGSSW LKSG
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G49530.1 SIN-like family protein1.2e-8244.5Show/hide
Query:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD
        +S   Y++ LC G S+ +++ K   KR LLSL L+ER++KLL EG P+ R+S LKHYAP++  ++F+ +LQ+Y + VQGLW PK+  LL  DG    ARD
Subjt:  LSKHDYMDSLCPGASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARD

Query:  FVLSLFSKNPVVNSSQINVP-KSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFR---GSVKSVPQANAATGK
        +VLSLFS+N  +  S++      ++  ++  L  F  ER   KDWKFKE TD SF+ +Y +IV++Q+  W    E + +      G  ++  + N     
Subjt:  FVLSLFSKNPVVNSSQINVP-KSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFR---GSVKSVPQANAATGK

Query:  PELVPKPEKQVSHEKATTKSSNAALNRKST--MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKII
          +  KPE   +       S N  ++R  T  M +E ++ALPKAL+K+FQ HKVC ++ ICQGLRDLAVS S  PKAD+ M V  A  VDA   EL+ +I
Subjt:  PELVPKPEKQVSHEKATTKSSNAALNRKST--MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKII

Query:  SQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLK
        + VAT IHG YV  SSP+HPEYD LR+VVI L  G  P   L +A+V AA + +L R++ +NEY KVM+EIC ++ S WVL+
Subjt:  SQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVSAASQRELGRDVNSNEYSKVMNEICVSHGSSWVLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACAAAGGAAGACAACGGTACAGTCAATGTCAAGGCGGTCGACTCCGACGATGGAAGAGCAAAAGTCCGACGAGTACATCAGAGGAGCAAGAATGTTGGCGGGC
AAAGAAGTGGCAAAGTGAACAACTTCGACGATGGAAATTTCATAAGAAAGAGGAAGAAAAAGCGAAGAGTGAAGGGAAGGAAAAAATATGGCCGGTGGTCACAAGATTAG
AGATGAAGGCGTGGCGGAAGCTTCGACGGGTGCGACTGGAGGATGATGAACGAACAAAAATGGAGAGAGATAATCACAAAAGGGAGACTCATCGTCGTCGACGAAGAAGG
ATATGGTCGGAGACAGAGACAGAGATGGAGACGGGGTGGAAGCAGCGGCTGGCAAGTGGTGAACGAACGGTGTTGGAGGGAGACAATTGTGAAAGGAAGATGAGAACAAC
AGAAGGTAACCCCATGGGCCAGACATTAATGGGTGAGCTGAGTTTAATTGAATTAGTGAAGCCCATTACTTGTCAATTGAAGGAAATCGAGAGGGTTTACATCAAGGATT
TTGGCTGGGCTGCCTCACATCTGGAACTTGGGATCCAACCTACTATTATAGACTCACGTTGCTGGCCATCTCAATTGAGCAAGCATGACTATATGGACTCCTTGTGTCCT
GGTGCAAGCACCAGCAGCAATAAGCGCAAAGGTCCATCTAAAAGGTATTTGCTTTCATTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGGACCTCCGATTCA
AAGATTTAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCAGATGAGTTTATCGAATCTCTTCAGCAGTATGCTCAGTCAGTACAGGGTCTCTGGGTTCCAAAAAGTT
CATTTCTACTTCCCCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTCTCTCTGTTTAGCAAGAATCCCGTGGTCAACTCTTCGCAGATAAATGTTCCGAAGTCT
CTTCGGGACAAAGTGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCATTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAACTACCT
GGATATTGTTCAGAAGCAAGAAAAGGTCTGGAGGTCTGTGGAAGAAGGGATCACTAATTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTACAGGAA
AGCCTGAATTGGTTCCTAAACCTGAAAAACAAGTCAGTCATGAAAAAGCTACAACCAAAAGCAGTAATGCAGCTCTTAACCGGAAAAGTACCATGTCGGATGAAACTCGA
GAAGCTTTACCGAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAGTCTACTCTTCC
AAAAGCTGATGCCAGAATGGTGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGACGAATTAAAAAAGATCATAAGCCAAGTAGCAACTGAGATTCATGGTCTCTATG
TCTTGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTGTCATTCAACTTTTTCGTGGACGTGGACCTAAAGCAGCGCTTAAAAGAGCTGATGTTTCG
GCAGCTTCCCAACGTGAACTTGGGAGAGATGTCAATAGCAATGAATATAGCAAGGTTATGAATGAGATTTGCGTGTCCCACGGTTCTTCTTGGGTCTTGAAGAGTGGTAC
CATAATCAAGCGCAGCGAACCTACTGGAAAATGCTTTGGCAGACTGAAGGCTTTTAATGTCGTGCAACACAAAAATTTTGAATTGTACAGAAAAAGAGGGAGATCGGCTG
AGGACTGTTTTCCCGTGCTCGCCGGAGGAGCCCAGATCTGGGAGTTTCAGTCATTGTCATCGCACGTCGAGGGTCTCGTGGTTGTTGGAGTTTCAGTCGAGGGTCCCGTG
GTTGCCGGAGTTTCAGTCGTTGTCATCGCGTTAGCGGAGTTCGTGGTCCAAAACCCAGATCTGGTCAACGTTTGCGATGTTTGCAACCCAAAACCCCGATCTGGTCGGCA
TTCGTGGGCGTCCGTCAGGGTTCGAGGTCGGCGTTCGCGGTCGTCTTCTCTGGCAATATCTTCGGCTGTGCAGTGGCGGTCGTGGTCGGCGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACAAAGGAAGACAACGGTACAGTCAATGTCAAGGCGGTCGACTCCGACGATGGAAGAGCAAAAGTCCGACGAGTACATCAGAGGAGCAAGAATGTTGGCGGGC
AAAGAAGTGGCAAAGTGAACAACTTCGACGATGGAAATTTCATAAGAAAGAGGAAGAAAAAGCGAAGAGTGAAGGGAAGGAAAAAATATGGCCGGTGGTCACAAGATTAG
AGATGAAGGCGTGGCGGAAGCTTCGACGGGTGCGACTGGAGGATGATGAACGAACAAAAATGGAGAGAGATAATCACAAAAGGGAGACTCATCGTCGTCGACGAAGAAGG
ATATGGTCGGAGACAGAGACAGAGATGGAGACGGGGTGGAAGCAGCGGCTGGCAAGTGGTGAACGAACGGTGTTGGAGGGAGACAATTGTGAAAGGAAGATGAGAACAAC
AGAAGGTAACCCCATGGGCCAGACATTAATGGGTGAGCTGAGTTTAATTGAATTAGTGAAGCCCATTACTTGTCAATTGAAGGAAATCGAGAGGGTTTACATCAAGGATT
TTGGCTGGGCTGCCTCACATCTGGAACTTGGGATCCAACCTACTATTATAGACTCACGTTGCTGGCCATCTCAATTGAGCAAGCATGACTATATGGACTCCTTGTGTCCT
GGTGCAAGCACCAGCAGCAATAAGCGCAAAGGTCCATCTAAAAGGTATTTGCTTTCATTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGGACCTCCGATTCA
AAGATTTAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCAGATGAGTTTATCGAATCTCTTCAGCAGTATGCTCAGTCAGTACAGGGTCTCTGGGTTCCAAAAAGTT
CATTTCTACTTCCCCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTCTCTCTGTTTAGCAAGAATCCCGTGGTCAACTCTTCGCAGATAAATGTTCCGAAGTCT
CTTCGGGACAAAGTGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCATTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAACTACCT
GGATATTGTTCAGAAGCAAGAAAAGGTCTGGAGGTCTGTGGAAGAAGGGATCACTAATTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTACAGGAA
AGCCTGAATTGGTTCCTAAACCTGAAAAACAAGTCAGTCATGAAAAAGCTACAACCAAAAGCAGTAATGCAGCTCTTAACCGGAAAAGTACCATGTCGGATGAAACTCGA
GAAGCTTTACCGAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAGTCTACTCTTCC
AAAAGCTGATGCCAGAATGGTGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGACGAATTAAAAAAGATCATAAGCCAAGTAGCAACTGAGATTCATGGTCTCTATG
TCTTGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTGTCATTCAACTTTTTCGTGGACGTGGACCTAAAGCAGCGCTTAAAAGAGCTGATGTTTCG
GCAGCTTCCCAACGTGAACTTGGGAGAGATGTCAATAGCAATGAATATAGCAAGGTTATGAATGAGATTTGCGTGTCCCACGGTTCTTCTTGGGTCTTGAAGAGTGGTAC
CATAATCAAGCGCAGCGAACCTACTGGAAAATGCTTTGGCAGACTGAAGGCTTTTAATGTCGTGCAACACAAAAATTTTGAATTGTACAGAAAAAGAGGGAGATCGGCTG
AGGACTGTTTTCCCGTGCTCGCCGGAGGAGCCCAGATCTGGGAGTTTCAGTCATTGTCATCGCACGTCGAGGGTCTCGTGGTTGTTGGAGTTTCAGTCGAGGGTCCCGTG
GTTGCCGGAGTTTCAGTCGTTGTCATCGCGTTAGCGGAGTTCGTGGTCCAAAACCCAGATCTGGTCAACGTTTGCGATGTTTGCAACCCAAAACCCCGATCTGGTCGGCA
TTCGTGGGCGTCCGTCAGGGTTCGAGGTCGGCGTTCGCGGTCGTCTTCTCTGGCAATATCTTCGGCTGTGCAGTGGCGGTCGTGGTCGGCGTTCTAG
Protein sequenceShow/hide protein sequence
MKNKGRQRYSQCQGGRLRRWKSKSPTSTSEEQECWRAKKWQSEQLRRWKFHKKEEEKAKSEGKEKIWPVVTRLEMKAWRKLRRVRLEDDERTKMERDNHKRETHRRRRRR
IWSETETEMETGWKQRLASGERTVLEGDNCERKMRTTEGNPMGQTLMGELSLIELVKPITCQLKEIERVYIKDFGWAASHLELGIQPTIIDSRCWPSQLSKHDYMDSLCP
GASTSSNKRKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVPKS
LRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPEKQVSHEKATTKSSNAALNRKSTMSDETR
EALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFRGRGPKAALKRADVS
AASQRELGRDVNSNEYSKVMNEICVSHGSSWVLKSGTIIKRSEPTGKCFGRLKAFNVVQHKNFELYRKRGRSAEDCFPVLAGGAQIWEFQSLSSHVEGLVVVGVSVEGPV
VAGVSVVVIALAEFVVQNPDLVNVCDVCNPKPRSGRHSWASVRVRGRRSRSSSLAISSAVQWRSWSAF