; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019165 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019165
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationchr5:39421541..39422613
RNA-Seq ExpressionLag0019165
SyntenyLag0019165
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-12182.04Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGF+PL   GGGR PNYHLPTT        TDGLFWY+NY+S EIW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSDG N KRPRD N A SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+    QQQ     PPNSASPDGG LLITAPS     TT E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]2.0e-12082.33Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGFFPL   GGGR PNYHLPTT        TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSDG N KRPRD N A SSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQ----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+    QQQ    PPNSASPDGGALLITAPS     TT E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQ----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]1.1e-12081.72Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGFFPL   GGGR PNYHLPTT        TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSD  N KRPRD N A SSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+       PPNSASPDGGALLITAP+     TT E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-11981.69Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGF+PL   GGGR PNYHLPTT    I   TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSDG N KRPRD N A SSGLEMGN PVEVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+    QQQ     PPNSASPDGGALLITAPS     TT E PPIS ALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

XP_023552316.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]4.5e-11780.28Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGF+PL   GGGR PNYHLPTT    I   TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSDG N KRPRD+  A+S   EMGN PVEVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+    QQQ     PPNSASPDGGALLITAPS     TT E PPIS ALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQ-----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein8.9e-10371.23Show/hide
Query:  MAGFFPL-GSGGGGRGPNYHLPT-TGGGEIIHP-TDGLFWYKNYDSFEIW----QQQQQQ--QQQAGEGFVYSGDESPPRSSLVMVRSGR---GGGGQVM
        MAGFFPL G G GGR PNYH PT T GGEIIHP T+GLFWYKNY+  E W    QQQQQQ  Q+Q GEGFVYSGDESP RSSLVMVRSGR   GGGG V 
Subjt:  MAGFFPL-GSGGGGRGPNYHLPT-TGGGEIIHP-TDGLFWYKNYDSFEIW----QQQQQQ--QQQAGEGFVYSGDESPPRSSLVMVRSGR---GGGGQVM

Query:  SCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRD-HNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQY
        SCQDCGNQAKKDC+HMRCRTCCKSRG++CETHVKSTWVPASKRR+R LRSDG N KRP+D H + TSSGL+MGNFP EV++ AVFRCVRMT+LDET+DQY
Subjt:  SCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRD-HNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQY

Query:  AYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        AYQTAVNIGG IFKGILYDHGP+    Q  PP S+S                         SAALLDP PPYPTPLSTYI AGTQFFLPP+S
Subjt:  AYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like1.7e-10169.97Show/hide
Query:  MAGFFPL-GSGGGGRGPNYHLPT-TGGGEIIHP-TDGLFWYKNYDSFEIW-------QQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRG---GGGQV
        MAGFFPL G G GGR PNYH PT T GGEIIHP T+GLFWYKNY+  E W       QQQQ  Q+Q GEGFVYSGDESP RSSLVMVRSGRG   GGG V
Subjt:  MAGFFPL-GSGGGGRGPNYHLPT-TGGGEIIHP-TDGLFWYKNYDSFEIW-------QQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRG---GGGQV

Query:  MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRD-HNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ
         SCQDCGNQAKKDC HMRCRTCCKSRG++CETHVKSTWVPASKRR+R LRSDG N KRP+D H + TSSGL+M NFP+EV++ AVFRCVRMTTLDET+DQ
Subjt:  MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRD-HNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        YAYQTAVNIGGHIFKGILYDHGP+    Q  PP S+S                         +AALLD  PPYPTPLSTYI AGTQFFLPP+S
Subjt:  YAYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

A0A6J1EMT4 protein SHI RELATED SEQUENCE 3-like1.7e-10172.24Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGFFPLG GGGG         + GGEIIHPTDGL WYKNY+SFE      +QQQQ GEGFVYSG+ SP RSSLVMVRS   GGG+V+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDET--NDQYAYQTAVNIGGH
        C+HMRCRTCCKSRG+ CETHVKSTWVPASKRRER +R+ G + KRPRD  +A SSG E+GNFP EV+STAVFRCVRMTTLDE    DQYAYQTAVNIGGH
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDET--NDQYAYQTAVNIGGH

Query:  IFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        IFKGILYDHGPD  HH   PP SASPDGGALLI         TTAE    SAA LDPPP YP PL++YI AGTQFF PPTS
Subjt:  IFKGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like9.5e-12182.33Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGFFPL   GGGR PNYHLPTT        TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSDG N KRPRD N A SSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQ----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+    QQQ    PPNSASPDGGALLITAPS     TT E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQ----PPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like5.6e-12181.72Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD
        MAGFFPL   GGGR PNYHLPTT        TDGLFWY+NY+S  IW QQQQ QQQAGEGFVYSGDESPPRSSLVM+RSGR GGGQV+SCQDCGNQAKKD
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF
        CLHMRCRTCCKSRG+DCETHVKSTWVPASKRRER LRSD  N KRPRD N A SSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQ+AYQTAVNIGGH F
Subjt:  CLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIF

Query:  KGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        KGILYDHGP+       PPNSASPDGGALLITAP+     TT E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Subjt:  KGILYDHGPDHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 11.9e-4938.57Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFW--YKN--------------YDSFEIWQ---------QQQQQQQQ-------------------
        MA FF L    GG     H   +    ++ PT+   W  Y+N              Y  FE+WQ         Q  QQQQQ                   
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFW--YKN--------------YDSFEIWQ---------QQQQQQQQ-------------------

Query:  ---AGEGF-VYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLR--------------S
           +  GF + +GD    RS  VM+RSG GG    +SCQDCGNQAKKDC HMRCRTCCKSRG+ C+THVKSTWVPA+KRRERQ +              +
Subjt:  ---AGEGF-VYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLR--------------S

Query:  DGANPKRPRDHNNATS----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGG-
        +    KR R+  +A+S          +GLE+G FP +V ++AVF+C++M+++++  DQ AYQ AV+IGGH+FKGILYD G +  ++        +  GG 
Subjt:  DGANPKRPRDHNNATS----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPNSASPDGG-

Query:  -----------ALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
                   A + TA +T+    TA  P   +  LD P  +P PLST++ AGTQFF P  S
Subjt:  -----------ALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 74.8e-4540.46Show/hide
Query:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR
        Y N   FEI     +QQQQQQ   A    +YS                          D  P RSS       R G    M+CQDCGNQAKKDC HMRCR
Subjt:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV
        TCCKSRG+DC+THVKSTWV A+KRRERQ +      KR RD N                                NA+SSGLE  + P E+SS AVFRC+
Subjt:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV

Query:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG
        R++++D+ +++YAYQTAV+IGGH+FKGILYD GP  DHH +        S      L+ +  +AA      +   +   +DP   Y    TP + ++A G
Subjt:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG

Query:  TQFF
        T FF
Subjt:  TQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 51.5e-4341.5Show/hide
Query:  MAGFFPLGSGGGGRGPNY--HLPTTGGGEIIHPTDGLFWYK-----NYDSFEIW----------QQQQQQQQQAGE-------GFVYSGDES-----PPR
        MAGFF LG        N   H            ++ L+ YK     N   FEIW          QQQQQQQQ A         G V SG  S       R
Subjt:  MAGFFPLGSGGGGRGPNY--HLPTTGGGEIIHPTDGLFWYK-----NYDSFEIW----------QQQQQQQQQAGE-------GFVYSGDES-----PPR

Query:  SSLVMVRSGRGGGGQV------MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER--QLRS---------DGANPKRPR-------
        S    V S    GG        M+CQDCGNQAKKDC HMRCRTCCKSRG+ C+THVKSTWVPA+KRRER  QL S         +  N KR R       
Subjt:  SSLVMVRSGRGGGGQV------MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER--QLRS---------DGANPKRPR-------

Query:  ----DH--------------NNATSSGLEMG-NFPVEVSSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPDH--HHHQQQPPNSASP
            DH              N  ++SGLE+  + P EV+S A+FRCVR+++++E  D   YAYQTAVNIGGHIFKGILYD GP+H  +HH          
Subjt:  ----DH--------------NNATSSGLEMG-NFPVEVSSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPDH--HHHQQQPPNSASP

Query:  DGGALLITAPSTAAIPTTAESPPI----SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
            LL +  +T  +  TA         +  +LDP   YP  L+++I AGT FF PP S
Subjt:  DGGALLITAPSTAAIPTTAESPPI----SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 12.4e-5241.24Show/hide
Query:  MAGFFPL---GSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKN----------------------YDSFEIWQ---------QQQQQQQQ-------AGE
        MAGFF L   G GGGG G N     +        ++   WY+N                        + E+WQ         Q QQ QQ+       AG 
Subjt:  MAGFFPL---GSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKN----------------------YDSFEIWQ---------QQQQQQQQ-------AGE

Query:  G--------FVYSGDESPP----RSSLVMVRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER-----------Q
        G        F  SG+ S       ++++M+RSG  GGG   +SCQDCGNQAKKDC HMRCRTCCKSRG++C THV+STWVPA+KRRER           Q
Subjt:  G--------FVYSGDESPP----RSSLVMVRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER-----------Q

Query:  LRSDGANPKRPRDHNNATS-----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHH----HHQQQPPN
        L    + PKR R++  ATS           SGLE+GNFP EVSS+AVFRCVR++++++  +++AYQTAV+IGGHIFKGILYD GP       ++      
Subjt:  LRSDGANPKRPRDHNNATS-----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHH----HHQQQPPN

Query:  SASPDGGAL---LITAPSTAAIPTTAESPPI---------SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        S+S  GGA    LITA S      ++ +P +         +A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  SASPDGGAL---LITAPSTAAIPTTAESPPI---------SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES4.8e-5343.71Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDS--------------FEIWQ---------QQQQQQQQ--------AGEGFVYSGDESP
        MAGFF LG GGGG  P+ H   T        T+   W +N +S               E+WQ         QQQQQQQQ        AG G   S     
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDS--------------FEIWQ---------QQQQQQQQ--------AGEGFVYSGDESP

Query:  PRS--SLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSD---------GANPKRPRDHNNATS----
          S  +L+M+RSG G GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRERQ +           G+ PKR R+   A S    
Subjt:  PRS--SLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSD---------GANPKRPRDHNNATS----

Query:  ---------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQ---QQPPN--SASPDGGALLITAPSTAAIP
                 SGLE+GNFP EVSS+AVFRCVR++++D+  ++YAY+TAV+IGGH+FKG+LYD GP          QP N  +A P   +          + 
Subjt:  ---------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQ---QQPPN--SASPDGGALLITAPSTAAIP

Query:  TTAESPPISAALLDPPPPYPTPLSTYIAAGTQFF
         +     I  A L+    YPTP++T++  GT FF
Subjt:  TTAESPPISAALLDPPPPYPTPLSTYIAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 73.4e-4640.46Show/hide
Query:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR
        Y N   FEI     +QQQQQQ   A    +YS                          D  P RSS       R G    M+CQDCGNQAKKDC HMRCR
Subjt:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV
        TCCKSRG+DC+THVKSTWV A+KRRERQ +      KR RD N                                NA+SSGLE  + P E+SS AVFRC+
Subjt:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV

Query:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG
        R++++D+ +++YAYQTAV+IGGH+FKGILYD GP  DHH +        S      L+ +  +AA      +   +   +DP   Y    TP + ++A G
Subjt:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG

Query:  TQFF
        T FF
Subjt:  TQFF

AT1G19790.2 SHI-related sequence 73.4e-4640.46Show/hide
Query:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR
        Y N   FEI     +QQQQQQ   A    +YS                          D  P RSS       R G    M+CQDCGNQAKKDC HMRCR
Subjt:  YKNYDSFEI-----WQQQQQQQQQAGEGFVYS-------------------------GDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV
        TCCKSRG+DC+THVKSTWV A+KRRERQ +      KR RD N                                NA+SSGLE  + P E+SS AVFRC+
Subjt:  TCCKSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHN--------------------------------NATSSGLEMGNFPVEVSSTAVFRCV

Query:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG
        R++++D+ +++YAYQTAV+IGGH+FKGILYD GP  DHH +        S      L+ +  +AA      +   +   +DP   Y    TP + ++A G
Subjt:  RMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP--DHHHHQQQPPNSASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPY---PTPLSTYIAAG

Query:  TQFF
        T FF
Subjt:  TQFF

AT1G75520.1 SHI-related sequence 51.1e-4441.5Show/hide
Query:  MAGFFPLGSGGGGRGPNY--HLPTTGGGEIIHPTDGLFWYK-----NYDSFEIW----------QQQQQQQQQAGE-------GFVYSGDES-----PPR
        MAGFF LG        N   H            ++ L+ YK     N   FEIW          QQQQQQQQ A         G V SG  S       R
Subjt:  MAGFFPLGSGGGGRGPNY--HLPTTGGGEIIHPTDGLFWYK-----NYDSFEIW----------QQQQQQQQQAGE-------GFVYSGDES-----PPR

Query:  SSLVMVRSGRGGGGQV------MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER--QLRS---------DGANPKRPR-------
        S    V S    GG        M+CQDCGNQAKKDC HMRCRTCCKSRG+ C+THVKSTWVPA+KRRER  QL S         +  N KR R       
Subjt:  SSLVMVRSGRGGGGQV------MSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER--QLRS---------DGANPKRPR-------

Query:  ----DH--------------NNATSSGLEMG-NFPVEVSSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPDH--HHHQQQPPNSASP
            DH              N  ++SGLE+  + P EV+S A+FRCVR+++++E  D   YAYQTAVNIGGHIFKGILYD GP+H  +HH          
Subjt:  ----DH--------------NNATSSGLEMG-NFPVEVSSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPDH--HHHQQQPPNSASP

Query:  DGGALLITAPSTAAIPTTAESPPI----SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
            LL +  +T  +  TA         +  +LDP   YP  L+++I AGT FF PP S
Subjt:  DGGALLITAPSTAAIPTTAESPPI----SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related1.7e-5341.24Show/hide
Query:  MAGFFPL---GSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKN----------------------YDSFEIWQ---------QQQQQQQQ-------AGE
        MAGFF L   G GGGG G N     +        ++   WY+N                        + E+WQ         Q QQ QQ+       AG 
Subjt:  MAGFFPL---GSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKN----------------------YDSFEIWQ---------QQQQQQQQ-------AGE

Query:  G--------FVYSGDESPP----RSSLVMVRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER-----------Q
        G        F  SG+ S       ++++M+RSG  GGG   +SCQDCGNQAKKDC HMRCRTCCKSRG++C THV+STWVPA+KRRER           Q
Subjt:  G--------FVYSGDESPP----RSSLVMVRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRER-----------Q

Query:  LRSDGANPKRPRDHNNATS-----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHH----HHQQQPPN
        L    + PKR R++  ATS           SGLE+GNFP EVSS+AVFRCVR++++++  +++AYQTAV+IGGHIFKGILYD GP       ++      
Subjt:  LRSDGANPKRPRDHNNATS-----------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHH----HHQQQPPN

Query:  SASPDGGAL---LITAPSTAAIPTTAESPPI---------SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS
        S+S  GGA    LITA S      ++ +P +         +A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  SASPDGGAL---LITAPSTAAIPTTAESPPI---------SAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related3.4e-5443.71Show/hide
Query:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDS--------------FEIWQ---------QQQQQQQQ--------AGEGFVYSGDESP
        MAGFF LG GGGG  P+ H   T        T+   W +N +S               E+WQ         QQQQQQQQ        AG G   S     
Subjt:  MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDS--------------FEIWQ---------QQQQQQQQ--------AGEGFVYSGDESP

Query:  PRS--SLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSD---------GANPKRPRDHNNATS----
          S  +L+M+RSG G GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRERQ +           G+ PKR R+   A S    
Subjt:  PRS--SLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGYDCETHVKSTWVPASKRRERQLRSD---------GANPKRPRDHNNATS----

Query:  ---------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQ---QQPPN--SASPDGGALLITAPSTAAIP
                 SGLE+GNFP EVSS+AVFRCVR++++D+  ++YAY+TAV+IGGH+FKG+LYD GP          QP N  +A P   +          + 
Subjt:  ---------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQ---QQPPN--SASPDGGALLITAPSTAAIP

Query:  TTAESPPISAALLDPPPPYPTPLSTYIAAGTQFF
         +     I  A L+    YPTP++T++  GT FF
Subjt:  TTAESPPISAALLDPPPPYPTPLSTYIAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCAGCGGCGGCGGCGGTAGAGGACCCAATTATCACCTTCCCACCACCGGCGGCGGCGAGATCATTCATCCCACCGACGGGTTATTTTG
GTACAAAAATTATGATAGCTTTGAAATTTGGCAGCAGCAACAGCAGCAGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGCCGAGATCGTCGT
TGGTGATGGTGAGATCCGGCAGAGGCGGCGGTGGGCAAGTAATGAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGC
AAGAGCCGTGGCTATGACTGTGAAACCCACGTCAAAAGCACATGGGTTCCCGCCTCCAAACGCCGCGAGCGGCAGCTCCGCAGCGACGGAGCTAACCCCAAACGCCCCCG
AGACCACAACAACGCCACTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGATGCGTACGAATGACAACGTTGGACGAAACCA
ACGACCAATATGCTTATCAAACAGCTGTCAACATCGGAGGCCATATCTTCAAGGGAATTCTTTACGACCACGGCCCTGATCATCATCATCATCAACAACAACCACCCAAC
TCCGCCTCCCCCGACGGCGGCGCCCTCCTCATCACCGCCCCCTCCACCGCCGCAATCCCAACCACCGCCGAATCGCCACCCATCAGCGCCGCATTGCTTGATCCTCCTCC
GCCGTACCCAACTCCTCTCAGCACCTACATCGCCGCCGGTACGCAATTTTTTCTTCCACCAACATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTTTTTTCCCACTAGGCAGCGGCGGCGGCGGTAGAGGACCCAATTATCACCTTCCCACCACCGGCGGCGGCGAGATCATTCATCCCACCGACGGGTTATTTTG
GTACAAAAATTATGATAGCTTTGAAATTTGGCAGCAGCAACAGCAGCAGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGCCGAGATCGTCGT
TGGTGATGGTGAGATCCGGCAGAGGCGGCGGTGGGCAAGTAATGAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGC
AAGAGCCGTGGCTATGACTGTGAAACCCACGTCAAAAGCACATGGGTTCCCGCCTCCAAACGCCGCGAGCGGCAGCTCCGCAGCGACGGAGCTAACCCCAAACGCCCCCG
AGACCACAACAACGCCACTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGATGCGTACGAATGACAACGTTGGACGAAACCA
ACGACCAATATGCTTATCAAACAGCTGTCAACATCGGAGGCCATATCTTCAAGGGAATTCTTTACGACCACGGCCCTGATCATCATCATCATCAACAACAACCACCCAAC
TCCGCCTCCCCCGACGGCGGCGCCCTCCTCATCACCGCCCCCTCCACCGCCGCAATCCCAACCACCGCCGAATCGCCACCCATCAGCGCCGCATTGCTTGATCCTCCTCC
GCCGTACCCAACTCCTCTCAGCACCTACATCGCCGCCGGTACGCAATTTTTTCTTCCACCAACATCTTAG
Protein sequenceShow/hide protein sequence
MAGFFPLGSGGGGRGPNYHLPTTGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQQAGEGFVYSGDESPPRSSLVMVRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCC
KSRGYDCETHVKSTWVPASKRRERQLRSDGANPKRPRDHNNATSSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPDHHHHQQQPPN
SASPDGGALLITAPSTAAIPTTAESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS