CuGenDBv2

Gene ID	Lag0019243
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome location	chr5:40167411..40171078
RNA-Seq Expression	Lag0019243
Synteny	Lag0019243
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015189.1 hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-43

81.67

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        MEQ  +DSS++IE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSEVT NSIDHMHCF+DAAGR
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

XP_022136587.1 uncharacterized protein LOC111008257 isoform X1 [Momordica charantia]

2.2e-43

84.17

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

XP_022136588.1 uncharacterized protein LOC111008257 isoform X2 [Momordica charantia]

2.2e-43

84.17

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

XP_022136589.1 uncharacterized protein LOC111008257 isoform X3 [Momordica charantia]

2.2e-43

84.17

Show/hide

Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

XP_023553161.1 uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo]

1.3e-43

82.5

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        MEQ  +DSST+IE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSEVT NSIDHMHCF+DAAGR
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C4R3 uncharacterized protein LOC111008257 isoform X3

1.1e-43

84.17

Show/hide

Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

A0A6J1C5W4 uncharacterized protein LOC111008257 isoform X1

1.1e-43

84.17

Show/hide

Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

A0A6J1C7Z8 uncharacterized protein LOC111008257 isoform X2

1.1e-43

84.17

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        M+Q RAD ST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSE +GNSIDHMHCFSDAAG 
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

A0A6J1EUG1 uncharacterized protein LOC111437668

1.4e-43

81.67

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        MEQ  +DSS++IE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSEVT NSIDHMHCF+DAAGR
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

A0A6J1J2E9 uncharacterized protein LOC111482798

1.4e-43

81.67

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Query:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR
        MEQ  +DSS++IE  SQIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK+SLAIAESFTSLFASLRS LSEVT NSIDHMHCF+DAAGR
Subjt:  MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGR

Query:  LQESVLDAATKGNRYINSSL
        LQESVLDAATKGNRYINSSL
Subjt:  LQESVLDAATKGNRYINSSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)

1.4e-24

68.6

Show/hide

Query:  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSLSFVVT
        +S+P SL+Q EI K +  VEKDS AIAESF+SLF SLRS LSE TG+S+DHM CF +AAGRLQE+ LDAATKGNRYINS L   +T
Subjt:  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSLSFVVT

AT4G23330.2 unknown protein

3.2e-24

71.6

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Query:  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL
        +S+P SL+Q EI K +  VEKDS AIAESF+SLF SLRS LSE TG+S+DHM CF +AAGRLQE+ LDAATKGNRYINS L
Subjt:  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL

Sequences

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CDS sequence

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ATGGAGCAACCTCGGGCAGATTCTTCGACGACCATAGAAACTGAGAGTCAGATTCCGGGGATATCCCCTAATTCGACCATTCCCGAGTTGCCCACTTGTTCTGTCATTGA
AGATTGCACCAAATCCCAACCTTCGTTGAGCCAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAAAAGGATTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTG
CTTCACTCCGTTCGGCTCTCTCCGAGGTCACCGGCAACTCTATTGATCATATGCATTGCTTCAGCGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCTACA
AAGGGTAACCGATACATTAATTCTTCCTTGAGCTTTGTGGTTACTTCAATTGATGCTGGATGGCAGTCTCAGGCTTCAAATCTGCATACTCATCATATTAAACTCTCTTT
ATTGTTAACTGATGTGGACATAAGATTTTGGAAATTTGATATTTCCATAAGCACAAGGCTGAGGCTTATCAATTTTGGTATCGGAGCACCTTCTCTGGGGAATGGTGGGA
AAGATGGAGGGAAGGATTATTGCGTTGGAAGAGAAGCTTTCAGAGTTAGCTGTGAAGCAAGTGGATATGGAAGTGAGCTTGGTACGCAAATTGCAGAGGTAGGAGAGGCT
CAAGCAAACGTTGAAGCGAAATTAGACCTTCAGTTTACAATGGTCAAAGAAGAGATGAAAGCAATGTTTGCTCGGATAGAAGGAATGGTGCGTATCGAGAGAGGGTCCCC
GACCTCGGAAAGGACCATAACCGACAAGGGTAAGCGGGTGATGGATGAGGAATCGAGCCAGAAACGTGAGGAAAGTAAGGAGAGCGGTGAAGCACCTCCGAAAGGAAATG
AAGGAATTCAGGCACCGACTAATAGAGAGATTCCGCTGTTCGATATGCGACTGAGGAAACTGGAAGTGCCGGTTTTCAAAGGGGAGGAAGATGAAAACCCGGATGGATGG
TTGCATCGGGTGGAGAGGTACTTTGTGGTGAACCGATTATCTGAGAAGGACAAGCTTGTAGCGGCGGAGTTTCTGGCATTGTTGTTAGAGAGATTCCGACCGACTTCTCA
AGGGGATCGGTACGCCCATTTGATGCGATTGCAGCAGGAGACCACCGTGAGGGAGTACCGCCGGTGGTTTGAGCAGTTCACCGCAACCCTAAAAGACGTGTGTGAAGGGG
TGCTGGAGAGCAAGTTCGAATGTGGGCTGAAGGAAGAGGTCTAA

mRNA sequence

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Protein sequence

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MEQPRADSSTTIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTGNSIDHMHCFSDAAGRLQESVLDAAT
KGNRYINSSLSFVVTSIDAGWQSQASNLHTHHIKLSLLLTDVDIRFWKFDISISTRLRLINFGIGAPSLGNGGKDGGKDYCVGREAFRVSCEASGYGSELGTQIAEVGEA
QANVEAKLDLQFTMVKEEMKAMFARIEGMVRIERGSPTSERTITDKGKRVMDEESSQKREESKESGEAPPKGNEGIQAPTNREIPLFDMRLRKLEVPVFKGEEDENPDGW
LHRVERYFVVNRLSEKDKLVAAEFLALLLERFRPTSQGDRYAHLMRLQQETTVREYRRWFEQFTATLKDVCEGVLESKFECGLKEEV

Lag0019243 (gene) of Sponge gourd (AG-4) v1 genome