CuGenDBv2

Gene ID	Lag0019293
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	methyl-CpG-binding domain-containing protein 13 isoform X1
Genome location	chr5:40741602..40745201
RNA-Seq Expression	Lag0019293
Synteny	Lag0019293
Gene Ontology terms	NA
InterPro domains	IPR038945 - Methyl-CpG-binding domain-containing protein 13-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574171.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-36

57.65

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RYLT+G VS LA+K  +QR  D+EFQHDDIS                           S AVPK EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        ++ LE  +ITNDEAIFPNATSVGESMP   P+S HGE GT VH STL     PEQSDGKNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

KAG7013226.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.3e-36

57.65

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RYLT+G VS LA+K  +QR  D+EFQHDDIS                           S AVPK EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  +ITN+EAIFPNATSVGESMP   P+S HGE GT VH STL     PEQSDGKNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

XP_022944809.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita moschata]

3.4e-35

57.06

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Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RY+T+G VS LA+K  +QR  ++EFQHDDIS                           S AV K EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITNDEAIFPNATSVGESMP   P+S HGE GT VH STL     PEQSDGKNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

XP_023541411.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita pepo subsp. pepo]

8.4e-34

56.32

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Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RYLT+G VS LA+K  +QR  D+EFQHDDIS                           S AVPK EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDH----GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITNDEAIFPNATSVGESMP   P+S H    GE G  VH STL     PEQSDGKNDF + V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDH----GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

XP_023541412.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita pepo subsp. pepo]

1.5e-35

57.65

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RYLT+G VS LA+K  +QR  D+EFQHDDIS                           S AVPK EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITNDEAIFPNATSVGESMP   P+S HGE G  VH STL     PEQSDGKNDF + V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CGC7 methyl-CpG-binding domain-containing protein 13 isoform X2

2.6e-33

54.97

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PV GNAL SIRDV  +RYLTTGKVS LA+K  NQRN+++EFQ+DDIS                      ++  KS AV K EM  IGKARRQI+WS
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP---PVPNS--DHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVA
        ++S E SEI NDEA F N+  V ESMP   P   S  DHG  GTK+H  TL E KDPEQS  KNDFS+ V+
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP---PVPNS--DHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVA

A0A6J1CGY7 methyl-CpG-binding domain-containing protein 13 isoform X1

5.0e-32

53.14

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PV GNAL SIRDV  +RYLTTGKVS LA+K  NQRN+++EFQ+DDIS                      ++  KS AV K EM  IGKARRQI+WS
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP---PVPNSDH------GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVA
        ++S E SEI NDEA F N+  V ESMP   P   S H      G  GTK+H  TL E KDPEQS  KNDFS+ V+
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP---PVPNSDH------GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVA

A0A6J1FZ39 methyl-CpG-binding domain-containing protein 13 isoform X1

9.1e-34

55.75

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RY+T+G VS LA+K  +QR  ++EFQHDDIS                           S AV K EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDH----GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITNDEAIFPNATSVGESMP   P+S H    GE GT VH STL     PEQSDGKNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDH----GEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

A0A6J1FZ67 methyl-CpG-binding domain-containing protein 13 isoform X2

1.7e-35

57.06

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RY+T+G VS LA+K  +QR  ++EFQHDDIS                           S AV K EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITNDEAIFPNATSVGESMP   P+S HGE GT VH STL     PEQSDGKNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

A0A6J1HUA1 methyl-CpG-binding domain-containing protein 13 isoform X2

3.8e-32

54.71

Show/hide

Query:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS
        FYI PVNGN   SIR+V  +RYLT+G VS L +K  +QR  D+EFQHDDIS                           S AVPK EMQAIGKARRQIIW+
Subjt:  FYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGKARRQIIWS

Query:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS
        E+ LE  EITN+EAIFPNATSV ES+P   P+S HGE G+ V  STL     PEQSD KNDFS+ V   S
Subjt:  ESSLETSEITNDEAIFPNATSVGESMP-PVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATGCTACTGTGGTTGATGGCAATGGTTCCAATGGATCCCACTCACAAACTTTTTTACATTCATCCTGTTAATGGAAATGCACTTCACTCCATAAGGGATGTAGATCG
GAATCGGTATCTAACAACGGGAAAGGTGAGCTGGTTAGCACATAAATTAATGAACCAGAGAAACAATGATATTGAGTTTCAACATGATGACATCTCTTTTTACATTGATC
CTGTTAATGGAAATGCACTCCACTCTATGAGGGATGTACATCGGAATCGGTATCTAACAACTGGAAAGTCGCTTGCTGTGCCCAAGATAGAGATGCAAGCGATTGGCAAA
GCAAGGAGACAGATTATATGGAGTGAGAGTTCATTGGAAACCAGTGAAATAACAAATGATGAAGCTATTTTTCCAAATGCTACAAGTGTTGGAGAAAGCATGCCTCCTGT
ACCTAATTCCGATCATGGGGAAAAAGGCACTAAAGTGCATTGGTCTACTCTACCAGAGCCCAAAGATCCAGAGCAATCAGATGGAAAGAATGATTTTTCTCAATTTGTGG
CGAATCGCAGCTTGATAGATAAATCAGTTTATAGGGAACACTCAGCTCCTAAGTGTTGCAAACTTTGGTCGAATTTTATAAGAGGAAAACTGACTGAGTCTTTAATTTTA
GCTTAA

mRNA sequence

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Protein sequence

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MMLLWLMAMVPMDPTHKLFYIHPVNGNALHSIRDVDRNRYLTTGKVSWLAHKLMNQRNNDIEFQHDDISFYIDPVNGNALHSMRDVHRNRYLTTGKSLAVPKIEMQAIGK
ARRQIIWSESSLETSEITNDEAIFPNATSVGESMPPVPNSDHGEKGTKVHWSTLPEPKDPEQSDGKNDFSQFVANRSLIDKSVYREHSAPKCCKLWSNFIRGKLTESLIL
A

Lag0019293 (gene) of Sponge gourd (AG-4) v1 genome