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Lag0019350 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019350
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr5:41368397..41371458
RNA-Seq ExpressionLag0019350
SyntenyLag0019350
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048199.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.7e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
KAA0056771.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.7e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.7e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.7e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
TYK08059.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
TrEMBL top hitse value%identityAlignment
A0A5A7U426 Putative mitochondrial protein4.2e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
A0A5A7UTE5 Putative mitochondrial protein4.2e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
A0A5A7UZE5 Putative mitochondrial protein4.2e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
A0A5D3BEU0 Putative mitochondrial protein4.2e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
A0A5D3CCL2 Retrotransposon protein4.2e-1783.33Show/hide
Query:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
        TS LFLLSNICNLVP+RLDSTNYVLWK+QVSSILKAHSLFGHID+TLP P +++
Subjt:  TSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACACAGCAGCAGCATCTTCTGTAACATCGCCCCTGTTTCTTCTATCAAATATTTGCAACCTCGTGCCGCTCCGCTTGGATTCAACAAACTACGTTTTATGGAA
ATTTCAAGTCTCCTCCATCTTGAAGGCCCATTCGTTATTTGGCCATATTGATGAAACGCTCCCAAAACCTGCGCAATATATCTTGTTAGGTGTAATTTTGGACCACCTCG
ATGTACAAGGAGCTAACGAGGACAACCGGACAGAAATCAGACTGGAGGGTGGACCCCGGGGCGAAATGGGCCAGAGGGTCAGGCCAAGCCCGAAGGGGTCGGGTTTTCGG
CCCGACCCCATGCTCGGCCTCGGCCGACCCTCGACTCGCTTGCGCGGGTCGAGCCCGTCCGGCTCCGTTTGGCTCCTGCTGCCTCTGTCCTCCCCGATTCCGCCTGGTTC
GTCCCGAAATGCCTCCGAATTCCTAAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACACAGCAGCAGCATCTTCTGTAACATCGCCCCTGTTTCTTCTATCAAATATTTGCAACCTCGTGCCGCTCCGCTTGGATTCAACAAACTACGTTTTATGGAA
ATTTCAAGTCTCCTCCATCTTGAAGGCCCATTCGTTATTTGGCCATATTGATGAAACGCTCCCAAAACCTGCGCAATATATCTTGTTAGGTGTAATTTTGGACCACCTCG
ATGTACAAGGAGCTAACGAGGACAACCGGACAGAAATCAGACTGGAGGGTGGACCCCGGGGCGAAATGGGCCAGAGGGTCAGGCCAAGCCCGAAGGGGTCGGGTTTTCGG
CCCGACCCCATGCTCGGCCTCGGCCGACCCTCGACTCGCTTGCGCGGGTCGAGCCCGTCCGGCTCCGTTTGGCTCCTGCTGCCTCTGTCCTCCCCGATTCCGCCTGGTTC
GTCCCGAAATGCCTCCGAATTCCTAAAACCCTAG
Protein sequenceShow/hide protein sequence
MANTAAASSVTSPLFLLSNICNLVPLRLDSTNYVLWKFQVSSILKAHSLFGHIDETLPKPAQYILLGVILDHLDVQGANEDNRTEIRLEGGPRGEMGQRVRPSPKGSGFR
PDPMLGLGRPSTRLRGSSPSGSVWLLLPLSSPIPPGSSRNASEFLKP