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Lag0019356 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019356
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr5:41419524..41419826
RNA-Seq ExpressionLag0019356
SyntenyLag0019356
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF42492.1 conserved hypothetical protein [Ricinus communis]4.5e-1193.18Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAE+NQKPKGSQLEARAVALKVICPICK  L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

KAG4188177.1 hypothetical protein ERO13_A08G146900v2 [Gossypium hirsutum]3.5e-1195.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKV CPICKV L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

OAY24306.1 hypothetical protein MANES_17G004800v8 [Manihot esculenta]1.2e-1195.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAE+NQKPKGSQLEARAVALKV CPICKVLL
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

PPS03062.1 hypothetical protein GOBAR_AA17604 [Gossypium barbadense]4.5e-1166.67Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKV-------LLLFNL--SCSFTTRLDFNV
        MTRGKQKIEAQRRNAEKNQKPKGSQL+ARAVALKV CPICK+       L+LF+   +CS +++  F V
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKV-------LLLFNL--SCSFTTRLDFNV

TYK16504.1 zinc finger protein 706-like protein [Cucumis melo var. makuwa]1.6e-1195.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQ+RNAEKNQKPKGSQLEARAVALKVICPICKV L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

TrEMBL top hitse value%identityAlignment
A0A2C9U4I8 C2H2-type domain-containing protein5.8e-1295.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAE+NQKPKGSQLEARAVALKV CPICKVLL
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

A0A5D2PH60 C2H2-type domain-containing protein1.7e-1195.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKV CPICKV L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

A0A5D2YA98 C2H2-type domain-containing protein1.7e-1195.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKV CPICKV L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

A0A5D3CZW8 Zinc finger protein 706-like protein7.5e-1295.45Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQ+RNAEKNQKPKGSQLEARAVALKVICPICKV L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

B9S1M3 C2H2-type domain-containing protein2.2e-1193.18Show/hide
Query:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL
        MTRGKQKIEAQRRNAE+NQKPKGSQLEARAVALKVICPICK  L
Subjt:  MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGAGGAAAACAGAAGATCGAAGCTCAGAGACGAAATGCGGAGAAGAATCAGAAGCCCAAGGGCTCACAGCTCGAGGCCAGAGCCGTTGCCCTCAAAGTCATTTG
CCCTATTTGCAAGGTTCTTCTTCTCTTTAATCTTTCTTGTTCTTTTACGACTCGATTGGATTTCAATGTTTCTTTCTTCCTTGTAAATCTCGATCATGATCTTTTTGATG
CTATGGTGTCGAAGCAACTGAAAATCCCATATCCGGCGATGAAATTCTCCTTTTTCTTGGTTGTTTTCTGTTCTAGGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGAGGAAAACAGAAGATCGAAGCTCAGAGACGAAATGCGGAGAAGAATCAGAAGCCCAAGGGCTCACAGCTCGAGGCCAGAGCCGTTGCCCTCAAAGTCATTTG
CCCTATTTGCAAGGTTCTTCTTCTCTTTAATCTTTCTTGTTCTTTTACGACTCGATTGGATTTCAATGTTTCTTTCTTCCTTGTAAATCTCGATCATGATCTTTTTGATG
CTATGGTGTCGAAGCAACTGAAAATCCCATATCCGGCGATGAAATTCTCCTTTTTCTTGGTTGTTTTCTGTTCTAGGTTATAA
Protein sequenceShow/hide protein sequence
MTRGKQKIEAQRRNAEKNQKPKGSQLEARAVALKVICPICKVLLLFNLSCSFTTRLDFNVSFFLVNLDHDLFDAMVSKQLKIPYPAMKFSFFLVVFCSRL