; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019378 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019378
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionembryo defective 3006
Genome locationchr5:41607944..41612433
RNA-Seq ExpressionLag0019378
SyntenyLag0019378
Gene Ontology termsGO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domainsIPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-3050.81Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMT--LFLRGSLILLHV
        M+KK  IGTP+SSS IDLKKSFKLAV SLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ  V++    +I    +      +CV T   F++  L+L +V
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMT--LFLRGSLILLHV

Query:  QIRSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
        +              L   D+    S                        ++T+IM+IANYLSMTKKNEIQHLKD LK AEEQNR
Subjt:  QIRSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR

XP_022136388.1 uncharacterized protein LOC111008110 [Momordica charantia]1.2e-2744.98Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        MEKK  + TP SSSH+DLKKSFKLAV SLLTSCSREEFRECF RFT AEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQG-QPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--------KPVSMS
           F  +S  +     + V   L +V         +   QG  P  S  ++T+IMDIANYLSMTKKNEIQ LKD LK AEEQN+          K V   
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQG-QPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--------KPVSMS

Query:  RGKEWRTPRAWQMLLRSALATDGVNGTWD
         G      + W      A ATDGVN T D
Subjt:  RGKEWRTPRAWQMLLRSALATDGVNGTWD

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]3.1e-2848.11Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        M+KK  IGTP+SSS IDLKKSFKLAV SLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
           F                  L     + + + +V ++  +    P   ++T+IM+IANYLSMTKKNEIQHLKD LK AEEQNR
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]2.0e-2747.57Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        M+KK  IGTP+SSS IDLKKSFKLAV SLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
           F                  L     + + + +V ++  +    P   ++T+IM+IANYLSMTKKNEIQHLKD LK AEEQNR
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]7.6e-2742.98Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        MEKKR I TP+SSS IDLKKSFKLAV SLLTSCSREEFRECFS+FT AEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--KPVSMSRGKEW
           F                  L     + + + +V ++  +    P   ++T+IM+IAN+LS+TKKNEIQHLKD LK AEEQNR    +   + +G + 
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--KPVSMSRGKEW

Query:  RTPRAWQM-LLRS---ALATDGVNGTWD
         +  A  +  LR    A  TDGVN T+D
Subjt:  RTPRAWQM-LLRS---ALATDGVNGTWD

TrEMBL top hitse value%identityAlignment
A0A6J1C7G2 uncharacterized protein LOC1110081105.7e-2844.98Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        MEKK  + TP SSSH+DLKKSFKLAV SLLTSCSREEFRECF RFT AEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQG-QPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--------KPVSMS
           F  +S  +     + V   L +V         +   QG  P  S  ++T+IMDIANYLSMTKKNEIQ LKD LK AEEQN+          K V   
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQG-QPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAF--------KPVSMS

Query:  RGKEWRTPRAWQMLLRSALATDGVNGTWD
         G      + W      A ATDGVN T D
Subjt:  RGKEWRTPRAWQMLLRSALATDGVNGTWD

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X11.5e-2848.11Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        M+KK  IGTP+SSS IDLKKSFKLAV SLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
           F                  L     + + + +V ++  +    P   ++T+IM+IANYLSMTKKNEIQHLKD LK AEEQNR
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR

A0A6J1FPA4 uncharacterized protein LOC1114470075.9e-2543.36Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        MEKK  I TPL+SS IDLK SFKLAV SLLTSCSREEFREC S FTT EQE LHRLF+Q+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAFKP--VSMSRGKEWRT
           F  +S  +     + V + L +V  +      +      P  S  ++T+IMDI NYLSMTKKNEIQHLKD LK +EEQNR  +     + +G E  +
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAFKP--VSMSRGKEWRT

Query:  PRA---WQMLLRS-ALATDGVNGTWD
          A    ++ +R  A ATDG NGT D
Subjt:  PRA---WQMLLRS-ALATDGVNGTWD

A0A6J1IY03 uncharacterized protein LOC1114816543.8e-2442.92Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        MEKK  I +PL+SS IDLKKSFKLAV SLLTSCSREEFRECFS FTTAEQE LH LF+Q+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAFKP--VSMSRGKEWRT
           F  +S  +     + V + L +V  +      +      P  S  ++T+IMDIA+YLS+TKKNEIQHLKD LK +EEQNR  +     + +G E  +
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAFKP--VSMSRGKEWRT

Query:  PRA---WQMLLR-SALATDGVNGTWD
          A    ++ +R  A A DG NGT D
Subjt:  PRA---WQMLLR-SALATDGVNGTWD

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X19.7e-2847.57Show/hide
Query:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI
        M+KK  IGTP+SSS IDLKKSFKLAV SLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ+                                +  LH  I
Subjt:  MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQI

Query:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
           F                  L     + + + +V ++  +    P   ++T+IM+IANYLSMTKKNEIQHLKD LK AEEQNR
Subjt:  RSFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSP--GRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19350.1 embryo defective 30065.5e-0730.22Show/hide
Query:  KKRGIGTPLSSS-HIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQIR
        +K G  T ++ S    LKKSFK  +  LLT+CS+++F + FS+F+ AEQE L +L+ ++                                ++ LH  I 
Subjt:  KKRGIGTPLSSS-HIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQIR

Query:  SFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR
          F+       +   + V   L +V  +      V      P  S   +TD+M IA  L+ +KKNEIQ L   L+ AEEQNR
Subjt:  SFFNGDSFFVWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCGCGGGATTGGTACTCCGTTGAGCTCAAGCCACATCGATCTCAAAAAGTCGTTCAAGCTCGCCGTTCCTTCGCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGATATGTGTCGTGTCTCCACAATGGTATGATATTGCCCAAAGTG
GACAATATCATACCATTGTGGAGATATGTGTCATGACTTTGTTCTTGCGTGGATCCTTAATTTTGTTGCATGTGCAAATCCGGTCTTTCTTCAATGGTGATAGCTTCTTT
GTATGGAAACTTAGAGGCTCCGACGTTAGGAAGTTCTTATCTAGTGTTTTCACAATGTCAGTGCAAATTGCCTCCGTTGCTAGGGTGCAAGGGCAGCCCACACAATCACC
TGGCCGAAGGACTGATATAATGGATATTGCTAATTATCTGTCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACAAGCTGAAAATAGCTGAGGAACAAAACCGTG
CATTCAAGCCCGTATCGATGTCTCGAGGAAAGGAGTGGAGGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGTGCTTTAGCAACTGATGGCGTGAACGGGACCTGGGAT
ATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGCGCGGGATTGGTACTCCGTTGAGCTCAAGCCACATCGATCTCAAAAAGTCGTTCAAGCTCGCCGTTCCTTCGCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGATATGTGTCGTGTCTCCACAATGGTATGATATTGCCCAAAGTG
GACAATATCATACCATTGTGGAGATATGTGTCATGACTTTGTTCTTGCGTGGATCCTTAATTTTGTTGCATGTGCAAATCCGGTCTTTCTTCAATGGTGATAGCTTCTTT
GTATGGAAACTTAGAGGCTCCGACGTTAGGAAGTTCTTATCTAGTGTTTTCACAATGTCAGTGCAAATTGCCTCCGTTGCTAGGGTGCAAGGGCAGCCCACACAATCACC
TGGCCGAAGGACTGATATAATGGATATTGCTAATTATCTGTCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACAAGCTGAAAATAGCTGAGGAACAAAACCGTG
CATTCAAGCCCGTATCGATGTCTCGAGGAAAGGAGTGGAGGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGTGCTTTAGCAACTGATGGCGTGAACGGGACCTGGGAT
ATGTAG
Protein sequenceShow/hide protein sequence
MEKKRGIGTPLSSSHIDLKKSFKLAVPSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQICVVSPQWYDIAQSGQYHTIVEICVMTLFLRGSLILLHVQIRSFFNGDSFF
VWKLRGSDVRKFLSSVFTMSVQIASVARVQGQPTQSPGRRTDIMDIANYLSMTKKNEIQHLKDKLKIAEEQNRAFKPVSMSRGKEWRTPRAWQMLLRSALATDGVNGTWD
M