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Lag0019384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIB domain-containing protein
Genome locationchr5:41682889..41686441
RNA-Seq ExpressionLag0019384
SyntenyLag0019384
Gene Ontology termsNA
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1215619.1 hypothetical protein CJ030_MR4G001669 [Morella rubra]1.7e-1550Show/hide
Query:  ISVGARLLSKKIQ----------LKP-----HLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFN
        + VG+R +S K+Q          +KP        KFLGIP  + R    +LISKF++LY  +SPGI KD +WEENLK +LHGKD VG+ EI K+LSPQFN
Subjt:  ISVGARLLSKKIQ----------LKP-----HLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFN

Query:  DP
         P
Subjt:  DP

KAE9606954.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]4.9e-1551.85Show/hide
Query:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL
        SK  +    LCKF+GIP  S R +I ++ISKFLKLY  +SPGI+KD+IWE+NL+++L GK+ +G  E+ KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL

KAG6577105.1 hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1871.83Show/hide
Query:  PAKISVGARLL-SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHG
        P  I++   L+ +KKIQLKP LCKFLGIPLV+PRGDIPILI+KFLK YQ QSPGI KD  WEENLK+ LHG
Subjt:  PAKISVGARLL-SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHG

KAG7015106.1 hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-2583.33Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHG
        MAPAKISVGARLLS+KIQLKP LCKFLGIPL++PRGDIPILI+KFLK YQ QSPGI KD  WEENLK+ LHG
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHG

XP_022136393.1 uncharacterized protein LOC111008113 [Momordica charantia]6.5e-4484.11Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMK
        MAPAKI+V A +LSKK+Q KP LCKFLGIPLVSPRGDIPILISKFLKLYQPQSPG+RKDRIWEENLK+IL GKDGVGM E+NKILSPQFND SLRN+EM+
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMK

Query:  RQEDIRN
        RQ+DIR+
Subjt:  RQEDIRN

TrEMBL top hitse value%identityAlignment
A0A2N9FY31 SWIB domain-containing protein2.1e-1660Show/hide
Query:  KFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMKRQED
        KFLGIP  S R    +LISKFLKLY  QSPGI+KD IWE+NL  +LHGKD VG+ EI K+LSPQFN     N E K +++
Subjt:  KFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMKRQED

A0A6A1WNV5 SWIB domain-containing protein8.1e-1650Show/hide
Query:  ISVGARLLSKKIQ----------LKP-----HLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFN
        + VG+R +S K+Q          +KP        KFLGIP  + R    +LISKF++LY  +SPGI KD +WEENLK +LHGKD VG+ EI K+LSPQFN
Subjt:  ISVGARLLSKKIQ----------LKP-----HLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFN

Query:  DP
         P
Subjt:  DP

A0A6A4Q0B8 Putative transcription regulator SWI/SNF-BAF60b family2.4e-1551.85Show/hide
Query:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL
        SK  +    LCKF+GIP  S R +I ++ISKFLKLY  +SPGI+KD+IWE+NL+++L GK+ +G  E+ KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL

A0A6A5MEA5 Putative transcription regulator SWI/SNF-BAF60b family2.4e-1551.85Show/hide
Query:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL
        SK  +    LCKF+GIP  S R +I ++ISKFLKLY  +SPGI+KD+IWE+NL+++L GK+ +G  E+ KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSL

A0A6J1C7G5 uncharacterized protein LOC1110081133.1e-4484.11Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMK
        MAPAKI+V A +LSKK+Q KP LCKFLGIPLVSPRGDIPILISKFLKLYQPQSPG+RKDRIWEENLK+IL GKDGVGM E+NKILSPQFND SLRN+EM+
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMK

Query:  RQEDIRN
        RQ+DIR+
Subjt:  RQEDIRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein4.4e-0641.82Show/hide
Query:  RGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF
        RG     + +++KL+  Q+P  +K+   ++ LK+I  GKD VG+TEI K+LSP F
Subjt:  RGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.2e-0534.74Show/hide
Query:  MAPAKISVGARL------LSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF
        MA A  S GA+       + K + +   L  F+G   VS R      I +++KL   Q+P  +++ + +E LK+I  GKD VG  EI+K+LS  F
Subjt:  MAPAKISVGARL------LSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.2e-0636.36Show/hide
Query:  APAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF
        +PAK +  +  + K   + P L +FLG    S R D    I  ++K +  Q+P  +++   +E LK I  GKD VG  EI+K+LSP F
Subjt:  APAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF

AT4G34290.1 SWIB/MDM2 domain superfamily protein3.1e-0434.92Show/hide
Query:  LGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF
        +G+P + PR      I  ++K +  Q P  ++D + +E LK I  GK+ VG  EI K++ P F
Subjt:  LGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCGCCAAGATTAGTGTCGGTGCTCGTCTTCTCAGCAAGAAAATTCAACTAAAACCTCATCTCTGCAAGTTCCTCGGCATTCCGCTCGTTTCTCCCCGCGGCGA
TATTCCGATCTTAATTTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGGATCAGAAAGGACAGGATCTGGGAGGAAAACCTAAAATCCATATTACATGGTAAAG
ACGGAGTTGGGATGACAGAGATCAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTTTAAGAAATGTGGAAATGAAACGTCAAGAAGATATCAGAAACCAGCCAGTA
GAGATTACCCATTTGCAATATGTCGACTTCACGCTTATCTTTTGTGGTAATATAAGGCAAAATCTGTTTCTTCTTGGTTCGGGACTCACTTTGAATAAGGCAAAAACTGC
CCTCTTAGGCATTGACATCAACAACCAAGAAGTTGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCGCCAAGATTAGTGTCGGTGCTCGTCTTCTCAGCAAGAAAATTCAACTAAAACCTCATCTCTGCAAGTTCCTCGGCATTCCGCTCGTTTCTCCCCGCGGCGA
TATTCCGATCTTAATTTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGGATCAGAAAGGACAGGATCTGGGAGGAAAACCTAAAATCCATATTACATGGTAAAG
ACGGAGTTGGGATGACAGAGATCAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTTTAAGAAATGTGGAAATGAAACGTCAAGAAGATATCAGAAACCAGCCAGTA
GAGATTACCCATTTGCAATATGTCGACTTCACGCTTATCTTTTGTGGTAATATAAGGCAAAATCTGTTTCTTCTTGGTTCGGGACTCACTTTGAATAAGGCAAAAACTGC
CCTCTTAGGCATTGACATCAACAACCAAGAAGTTGAACATTGA
Protein sequenceShow/hide protein sequence
MAPAKISVGARLLSKKIQLKPHLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGIRKDRIWEENLKSILHGKDGVGMTEINKILSPQFNDPSLRNVEMKRQEDIRNQPV
EITHLQYVDFTLIFCGNIRQNLFLLGSGLTLNKAKTALLGIDINNQEVEH