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Lag0019417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAlpha-amylase
Genome locationchr5:42003177..42008413
RNA-Seq ExpressionLag0019417
SyntenyLag0019417
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004556 - alpha-amylase activity (molecular function)
GO:0005509 - calcium ion binding (molecular function)
GO:0103025 - alpha-amylase activity (releasing maltohexaose) (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024254.1 Alpha-amylase, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4076.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D KP+ NQD HR+ALA+WVR  GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTFIDNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

XP_022142476.1 alpha-amylase [Momordica charantia]1.5e-4076.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D K NQNQD HRD+LA+WV+A GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTF+DNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

XP_022936258.1 alpha-amylase, partial [Cucurbita moschata]5.7e-4076.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D KP+ NQD HR+ALA+WVR  GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTFIDNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

XP_023536126.1 alpha-amylase, partial [Cucurbita pepo subsp. pepo]5.7e-4076.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D KP+ NQD HR+ALA+WVR  GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTFIDNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

XP_038896126.1 alpha-amylase-like [Benincasa hispida]9.3e-4379.05Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        +FAV EKWD LSYG D KPNQNQD+HRDALA+WVRA GDIVT FDFTTKGIL+A V+GELWRLKDSNG PP FIGIKP+S VTFI+NHDTGSTQRMW  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

TrEMBL top hitse value%identityAlignment
A0A067H9D2 Alpha-amylase8.8e-3973.33Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLSYG D KP+ NQD HR AL DWV+A G  V  FDFTTKGIL+A VQGELWRLKDSNGKPP FIGI P++ VTFIDNHDTGSTQR+W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K++
Subjt:  NLKII

A0A6J1CMA4 Alpha-amylase7.2e-4176.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D K NQNQD HRD+LA+WV+A GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTF+DNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

A0A6J1FCS4 Alpha-amylase2.7e-4076.19Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D KP+ NQD HR+ALA+WVR  GD VT FDFTTKGIL+A VQGELWRLKDSNGKPP FIGIKP+S VTFIDNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

A0A6J1IGI6 Alpha-amylase1.4e-3975.24Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLS G D KP+ NQD HR+ALA+WVR  GD VT FDFTTKGIL+A VQGELWRLKD NGKPP FIGIKP+S VTFIDNHDTGSTQ++W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K+I
Subjt:  NLKII

Q8RW88 Alpha-amylase (Fragment)8.8e-3973.33Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP
        DFAV EKWDSLSYG D KP+ NQD HR AL DWV+A G  V  FDFTTKGIL+A VQGELWRLKDSNGKPP FIGI P++ VTFIDNHDTGSTQR+W  P
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSP

Query:  NLKII
        + K++
Subjt:  NLKII

SwissProt top hitse value%identityAlignment
P04750 Alpha-amylase type B isozyme2.5e-3055.45Show/hide
Query:  AKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDI--VTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQR
        ++  FAV+E W SL+YG D KPN NQD HR  L +WV  +G     TTFDFTTKGIL   V+GELWRL+ ++GK P  IG  P   VTF+DNHDTGSTQ 
Subjt:  AKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDI--VTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQR

Query:  MWSSPNLKII
        MW  P+ +++
Subjt:  MWSSPNLKII

P17859 Alpha-amylase2.0e-4068.22Show/hide
Query:  KKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWS
        K DFAV EKWDS+SYG D KPN NQD+HR AL +WV + G  +T FDFTTKGIL+A VQGELWRL D NGKPP  IG+KP++ VTFIDNHDTGSTQR+W 
Subjt:  KKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWS

Query:  SPNLKII
         P+ K++
Subjt:  SPNLKII

P27932 Alpha-amylase isozyme 3A4.5e-3257.41Show/hide
Query:  AKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMW
        A+  F V+E W+SLSY  D KP  NQD  R  L +WV+ +G   T FDFTTKGIL++ VQGELWR++D +GK P  IG  P+  VTF+DNHDTGSTQRMW
Subjt:  AKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMW

Query:  SSPNLKII
          P+ K+I
Subjt:  SSPNLKII

P27933 Alpha-amylase isozyme 3D8.5e-3155.96Show/hide
Query:  TAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRM
        + K  F V+E W+SLSY  D KP  NQD  R  L +WV A+G    TFDFTTKG+L+A VQGELWRL+D NGK    IG  P+  VTF+DNHDTGSTQ++
Subjt:  TAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRM

Query:  WSSPNLKII
        W  P+ K++
Subjt:  WSSPNLKII

P27934 Alpha-amylase isozyme 3E4.2e-3056.73Show/hide
Query:  FAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSPN
        F V E W SL Y  D KP+ NQD  R  L +WV  +G   T FDFTTKGIL+A VQGELWRL D NGK P  +G  P   VTF+DNHDTGSTQ +W  P+
Subjt:  FAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSPN

Query:  LKII
         K++
Subjt:  LKII

Arabidopsis top hitse value%identityAlignment
AT1G69830.1 alpha-amylase-like 32.7e-2449.56Show/hide
Query:  KEVSLTAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQG-ELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDT
        K+    +K  FAV E WDSLSY   E  + NQD HR  + DW+ A       FD TTKGIL   +Q  E WRL D  GKPP  +G  P   VTFI+NHDT
Subjt:  KEVSLTAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQG-ELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDT

Query:  GSTQRMWSSPNLK
        GSTQ  W  P  K
Subjt:  GSTQRMWSSPNLK

AT1G76130.1 alpha-amylase-like 23.8e-2650Show/hide
Query:  KEVSLTAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTG
        KE    AK  F+V E WDS +Y      + NQD+HR  +  W+ A G I   FDFTTKGIL+  V+G+ WRL D+ GKPP  +G  P   VTF+DNHDTG
Subjt:  KEVSLTAKKDFAVSEKWDSLSYGADEKPNQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTG

Query:  STQRMWSSPN
        STQ  W  P+
Subjt:  STQRMWSSPN

AT4G25000.1 alpha-amylase-like9.7e-3056.6Show/hide
Query:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWV-RALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSS
        DFAV EKWD + YG D K + +Q+ HR  L  W+  A G ++T FDFTTKGIL++ V+GELWRLKDS GKPP  IGI P + VTFIDNHD   T R W  
Subjt:  DFAVSEKWDSLSYGADEKPNQNQDTHRDALADWV-RALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSS

Query:  PNLKII
        P+ K++
Subjt:  PNLKII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGGCTGGAGATCCAACTTCTGGTAAAGCTTTTTCTTAGTTGCATTACATATGATGTCCAAACCATAGCAACACCAACTACAGCTGAGGATACCGAGCGACCTTG
CCCGCAACAAGCATATGGAGAAGGGAAAGAGTTGGAGGGAATTACATCCAAGAAAAAGGTGCAAGTTGGCCCGGAAACTCAAGGTGGGTTCGGCTTCTCTCGTATTCTCC
ATTGTATCGTTAGGGCTTCACGCGACAAAGAGGTGAGTTTGACGGCGAAGAAAGATTTCGCAGTCAGTGAGAAATGGGATTCACTTTCTTATGGAGCGGACGAAAAACCT
AATCAGAACCAAGACACACATCGCGATGCTCTTGCAGATTGGGTTAGGGCTTTGGGCGACATTGTCACAACGTTTGATTTCACAACTAAAGGGATTCTTGAAGCTGTCGT
TCAAGGGGAGCTATGGAGGTTGAAGGATTCTAATGGGAAGCCGCCGAGATTCATCGGAATCAAGCCGAAAAGTGTCGTGACTTTCATCGACAATCACGACACCGGTTCAA
CCCAAAGAATGTGGTCATCCCCAAATTTGAAAATAATCCCCTTTTTTTTTGTTGTTGCGAATGATTTTCTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGGCTGGAGATCCAACTTCTGGTAAAGCTTTTTCTTAGTTGCATTACATATGATGTCCAAACCATAGCAACACCAACTACAGCTGAGGATACCGAGCGACCTTG
CCCGCAACAAGCATATGGAGAAGGGAAAGAGTTGGAGGGAATTACATCCAAGAAAAAGGTGCAAGTTGGCCCGGAAACTCAAGGTGGGTTCGGCTTCTCTCGTATTCTCC
ATTGTATCGTTAGGGCTTCACGCGACAAAGAGGTGAGTTTGACGGCGAAGAAAGATTTCGCAGTCAGTGAGAAATGGGATTCACTTTCTTATGGAGCGGACGAAAAACCT
AATCAGAACCAAGACACACATCGCGATGCTCTTGCAGATTGGGTTAGGGCTTTGGGCGACATTGTCACAACGTTTGATTTCACAACTAAAGGGATTCTTGAAGCTGTCGT
TCAAGGGGAGCTATGGAGGTTGAAGGATTCTAATGGGAAGCCGCCGAGATTCATCGGAATCAAGCCGAAAAGTGTCGTGACTTTCATCGACAATCACGACACCGGTTCAA
CCCAAAGAATGTGGTCATCCCCAAATTTGAAAATAATCCCCTTTTTTTTTGTTGTTGCGAATGATTTTCTTTTTTAA
Protein sequenceShow/hide protein sequence
MFRLEIQLLVKLFLSCITYDVQTIATPTTAEDTERPCPQQAYGEGKELEGITSKKKVQVGPETQGGFGFSRILHCIVRASRDKEVSLTAKKDFAVSEKWDSLSYGADEKP
NQNQDTHRDALADWVRALGDIVTTFDFTTKGILEAVVQGELWRLKDSNGKPPRFIGIKPKSVVTFIDNHDTGSTQRMWSSPNLKIIPFFFVVANDFLF