CuGenDBv2

Gene ID	Lag0019420
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DExH-box ATP-dependent RNA helicase DExH6 isoform X1
Genome location	chr5:42036757..42038325
RNA-Seq Expression	Lag0019420
Synteny	Lag0019420
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0003724 - RNA helicase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600457.1 DExH-box ATP-dependent RNA helicase DExH6, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-132

84.74

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND +GNDEAGV ETVEDKMDIENKSNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN++LP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPPPDFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HREQ+  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSGE SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

KAG7031106.1 DExH-box ATP-dependent RNA helicase DExH6 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-132

84.74

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND +GNDEAGV ETVEDKMDIENKSNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN++LP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPPPDFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HREQ+  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSGE SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

XP_038906440.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida]

7.2e-134

83.12

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPA+ENDN K  IEND +GNDEAG+ ETVE+KMDIENKSN+ PEEMIMSSPDNSVTVVVDRWL FWSKALDIAQLYCLRERLS+AILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN VLPSVL ASMHAL+CILSYDGL+GISLESVEMLTSMVNATEIG+F P RSIG+HKKVSWFL+SHSNYN+F VPEANGTSILNDPLSQN LPPPDFR 
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
         NPSD S+PNFRASPNSVYARS PQSHRE KP + GKPSRDQ+AT++QHA E NTRKQRK HKE  AA      +QQKPPSG+LSLNGYGL+ YGPYGPR
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

XP_038906444.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X3 [Benincasa hispida]

7.2e-134

83.12

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPA+ENDN K  IEND +GNDEAG+ ETVE+KMDIENKSN+ PEEMIMSSPDNSVTVVVDRWL FWSKALDIAQLYCLRERLS+AILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN VLPSVL ASMHAL+CILSYDGL+GISLESVEMLTSMVNATEIG+F P RSIG+HKKVSWFL+SHSNYN+F VPEANGTSILNDPLSQN LPPPDFR 
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
         NPSD S+PNFRASPNSVYARS PQSHRE KP + GKPSRDQ+AT++QHA E NTRKQRK HKE  AA      +QQKPPSG+LSLNGYGL+ YGPYGPR
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

XP_038906450.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X4 [Benincasa hispida]

7.2e-134

83.12

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPA+ENDN K  IEND +GNDEAG+ ETVE+KMDIENKSN+ PEEMIMSSPDNSVTVVVDRWL FWSKALDIAQLYCLRERLS+AILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN VLPSVL ASMHAL+CILSYDGL+GISLESVEMLTSMVNATEIG+F P RSIG+HKKVSWFL+SHSNYN+F VPEANGTSILNDPLSQN LPPPDFR 
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
         NPSD S+PNFRASPNSVYARS PQSHRE KP + GKPSRDQ+AT++QHA E NTRKQRK HKE  AA      +QQKPPSG+LSLNGYGL+ YGPYGPR
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FPD7 DExH-box ATP-dependent RNA helicase DExH6 isoform X5

1.5e-132

84.74

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND +GNDEAGV ETVEDKMDIENKSNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN++LP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPPPDFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HR QK  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSGE SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

A0A6J1FT07 DExH-box ATP-dependent RNA helicase DExH6 isoform X1

1.5e-132

84.74

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND +GNDEAGV ETVEDKMDIENKSNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN++LP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPPPDFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HR QK  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSGE SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

A0A6J1FT12 DExH-box ATP-dependent RNA helicase DExH6 isoform X4

1.5e-132

84.74

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND +GNDEAGV ETVEDKMDIENKSNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN++LP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPPPDFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HR QK  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSGE SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

A0A6J1INX6 DExH-box ATP-dependent RNA helicase DExH6 isoform X1

4.7e-131

84.09

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND  GNDEAGV ETVEDKMDIEN+SNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN+VLP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPP DFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HREQ+  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSG+ SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

A0A6J1IR83 DExH-box ATP-dependent RNA helicase DExH6 isoform X4

4.7e-131

84.09

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
        MVAKEIAVAPAKENDNGKGDI ND  GNDEAGV ETVEDKMDIEN+SNE PEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKH

Query:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS
        PN+VLP VLGASMHALACILSYDGLTGISLESVEMLT+MV+ATEI NFVP RS   HKKVS F RS SNYNDF VPE++GTS LN P SQNFLPP DFR+
Subjt:  PNRVLPSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRS

Query:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR
        ANPSDPSSPNFRA PNSVYARS  Q HREQ+  Q  KP +DQNATQ+QHA E  TRKQRKS +ERKAAQQQK PQ QKPPSG+ SLNGYGLS YGPYG R
Subjt:  ANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPR

Query:  GISLKRPR
        GISLKRPR
Subjt:  GISLKRPR

SwissProt top hits

e value

%identity

Alignment

F4IDQ6 DExH-box ATP-dependent RNA helicase DExH2

5.5e-20

35.37

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAH-GNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVK
        + ++EIAV+  +  D  K D E D   GN        V D MDI+ +   P E+ IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL A+ILFKVK
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAH-GNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVK

Query:  HPNRVLPSVLGASMHALACILSYDGLTGISLE--SVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPD
        HP   LP  LGASM+A+A +LSYD L   S++  +V+ +TS+V+AT   + +P                 +N N+    + N T + +     N L   +
Subjt:  HPNRVLPSVLGASMHALACILSYDGLTGISLE--SVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPD

Query:  FRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQN
           + PS+ +  N +  PN+        + +++K   + K  +  N
Subjt:  FRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQN

F4INY4 DExH-box ATP-dependent RNA helicase DExH6

1.5e-17

32.7

Show/hide

Query:  MVAKEIAVAP--AKENDNGKGDIEND----AHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAI
        +++ EIAVAP  + ++D+   + E+D    A+ N+E   + T E+ MDI  + +    +M MSSP+NSV +VVDRWL F + AL++AQ+Y LRERL A+I
Subjt:  MVAKEIAVAP--AKENDNGKGDIEND----AHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAI

Query:  LFKVKHPNRVLPSVLGASMHALACILSYDGLTGISL--ESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLR-------SHSNYN---DFNVPEANGTS
        LFKV HP   LP  LGASMHA+A ILSYDG  G+S   ES+    S     + G +  + +      + W L        SH+N N   ++N+      S
Subjt:  LFKVKHPNRVLPSVLGASMHALACILSYDGLTGISL--ESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLR-------SHSNYN---DFNVPEANGTS

Query:  ILNDPLSQNFLPPPDFRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPT--QQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQK--PPQQQK
        I   P  QN+    + ++ N +D      +   N     ++P++    KP+  +    S   N  +   + +    KQ  +     AA   K    ++ K
Subjt:  ILNDPLSQNFLPPPDFRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPT--QQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQK--PPQQQK

Query:  PPSGELSLNGYGLSMYGP
          SG  S +G     Y P
Subjt:  PPSGELSLNGYGLSMYGP

Arabidopsis top hits

e value

%identity

Alignment

AT1G06670.1 nuclear DEIH-boxhelicase

3.9e-21

35.37

Show/hide

Query:  MVAKEIAVAPAKENDNGKGDIENDAH-GNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVK
        + ++EIAV+  +  D  K D E D   GN        V D MDI+ +   P E+ IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL A+ILFKVK
Subjt:  MVAKEIAVAPAKENDNGKGDIENDAH-GNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVK

Query:  HPNRVLPSVLGASMHALACILSYDGLTGISLE--SVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPD
        HP   LP  LGASM+A+A +LSYD L   S++  +V+ +TS+V+AT   + +P                 +N N+    + N T + +     N L   +
Subjt:  HPNRVLPSVLGASMHALACILSYDGLTGISLE--SVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPD

Query:  FRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQN
           + PS+ +  N +  PN+        + +++K   + K  +  N
Subjt:  FRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPTQQGKPSRDQN

AT2G30800.1 helicase in vascular tissue and tapetum

1.1e-18

32.7

Show/hide

Query:  MVAKEIAVAP--AKENDNGKGDIEND----AHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAI
        +++ EIAVAP  + ++D+   + E+D    A+ N+E   + T E+ MDI  + +    +M MSSP+NSV +VVDRWL F + AL++AQ+Y LRERL A+I
Subjt:  MVAKEIAVAP--AKENDNGKGDIEND----AHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAI

Query:  LFKVKHPNRVLPSVLGASMHALACILSYDGLTGISL--ESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLR-------SHSNYN---DFNVPEANGTS
        LFKV HP   LP  LGASMHA+A ILSYDG  G+S   ES+    S     + G +  + +      + W L        SH+N N   ++N+      S
Subjt:  LFKVKHPNRVLPSVLGASMHALACILSYDGLTGISL--ESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLR-------SHSNYN---DFNVPEANGTS

Query:  ILNDPLSQNFLPPPDFRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPT--QQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQK--PPQQQK
        I   P  QN+    + ++ N +D      +   N     ++P++    KP+  +    S   N  +   + +    KQ  +     AA   K    ++ K
Subjt:  ILNDPLSQNFLPPPDFRSANPSDPSSPNFRASPNSVYARSRPQSHREQKPT--QQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQK--PPQQQK

Query:  PPSGELSLNGYGLSMYGP
          SG  S +G     Y P
Subjt:  PPSGELSLNGYGLSMYGP

Sequences

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CDS sequence

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ATGGTTGCAAAGGAGATTGCTGTTGCCCCTGCGAAGGAGAATGATAATGGTAAAGGTGATATTGAAAATGACGCTCATGGCAATGATGAAGCTGGTGTAGATGAA
ACTGTTGAAGATAAAATGGATATTGAAAATAAATCAAATGAACCACCAGAAGAGATGATTATGTCCTCCCCTGATAACTCAGTGACTGTGGTTGTTGACCGTTGG
TTGTACTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTGCAGCAATCTTATTCAAAGTAAAGCATCCAAATAGGGTTCTT
CCTTCTGTTCTTGGGGCCTCTATGCATGCCTTAGCTTGCATTCTATCTTATGATGGCTTAACTGGTATTTCATTAGAATCAGTAGAAATGTTGACGTCAATGGTA
AATGCAACTGAGATCGGCAATTTTGTACCCAGGAGGTCCATAGGGGCGCATAAGAAAGTAAGTTGGTTTCTTAGATCACATTCTAATTATAACGATTTTAATGTT
CCAGAAGCGAATGGAACATCAATTTTGAATGATCCGTTAAGTCAGAATTTTTTACCCCCGCCTGATTTTAGATCGGCAAACCCGAGTGACCCATCAAGCCCTAAT
TTTAGGGCTTCACCTAATTCAGTCTATGCAAGGTCAAGACCGCAGTCACATAGAGAGCAGAAGCCTACCCAGCAAGGCAAACCCTCTCGGGACCAAAATGCCACC
CAGGAGCAGCACGCTTCAGAGGGCAATACACGTAAACAGAGAAAGTCTCACAAGGAACGCAAGGCAGCTCAACAACAGAAACCTCCCCAACAGCAGAAGCCTCCA
TCAGGAGAGCTCAGTTTAAATGGGTATGGATTAAGCATGTACGGACCATATGGACCTCGGGGCATTTCTCTTAAGCGACCACGTGATATCTGGACACTGTTCAGA
GATTGGAACTGTGCTGAAATTACCTCTTCTGCTTTTGTAGATGAAACACAAGCAACATCCAAATCCATCCATTATAGTTTGCTTTCAGGTAGAGTTGTAAGTATT
GTAGATGATCAAGCTCGGTTCTCGCCTTTCCGTGCATTCCATACAATACAGGGTCTTTCAGGTATATCGTTCTGGGTTTCAGCGCATTAG

mRNA sequence

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Protein sequence

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MVAKEIAVAPAKENDNGKGDIENDAHGNDEAGVDETVEDKMDIENKSNEPPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNRVL
PSVLGASMHALACILSYDGLTGISLESVEMLTSMVNATEIGNFVPRRSIGAHKKVSWFLRSHSNYNDFNVPEANGTSILNDPLSQNFLPPPDFRSANPSDPSSPN
FRASPNSVYARSRPQSHREQKPTQQGKPSRDQNATQEQHASEGNTRKQRKSHKERKAAQQQKPPQQQKPPSGELSLNGYGLSMYGPYGPRGISLKRPRDIWTLFR
DWNCAEITSSAFVDETQATSKSIHYSLLSGRVVSIVDDQARFSPFRAFHTIQGLSGISFWVSAH

Lag0019420 (gene) of Sponge gourd (AG-4) v1 genome