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Lag0019423 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019423
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:42055799..42056377
RNA-Seq ExpressionLag0019423
SyntenyLag0019423
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]7.1e-2134.91Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHE-ATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK
        +P   R   D IVW+ DK G F+VKS YR+ +      E  + S NS  S LW  +WN+NV  + K+  W++ +DILPTK N++KKG+D+     FC + 
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHE-ATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK

Query:  RETTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN
         E+  H++  C      W I +   LT  +      + KD+   M++  +K +    I L+W IW  RN
Subjt:  RETTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN

XP_012835792.1 PREDICTED: uncharacterized protein LOC105956483 [Erythranthe guttata]2.1e-2031.21Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMS----HEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFC
        +P G+  AKD +VWH  + G F+VKS Y   M    +    H    S N+    LW  LW+S++ P+ K+  W+ + DI+PTK  + ++ I +NP+   C
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMS----HEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFC

Query:  RNKRETTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNR
            ETT+H + GC  + +VW     +    L    E  S + +   +   L++E     +++ WK W+ RNR
Subjt:  RNKRETTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNR

XP_012852602.1 PREDICTED: uncharacterized protein LOC105972213 [Erythranthe guttata]7.9e-2029.35Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRL-----TMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYF
        +P G   A D+++WH    G F+ KS Y       T +  M      S +   +  W  +W  ++ P+ ++  W+  +DILPT   + ++GI  +P+  +
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRL-----TMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYF

Query:  CRNKRETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQ
        C +K ETT H++  C+ ++ VW   P  +PN +T  S     WS   Y   + +NL +       I++WK W+ RNR    N+Q
Subjt:  CRNKRETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQ

XP_018829825.2 uncharacterized protein LOC108997893 [Juglans regia]1.6e-2031.14Show/hide
Query:  PTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRE
        P      +D I+WH  K GSFSVKS Y L  + +M++    S ++    +W K+W  +V P  K   W+   + LPT++N+ KK +  +P    C  + E
Subjt:  PTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRE

Query:  TTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN
        +  H++W C   K+VW      S  L      ++S   ++  + + LN+EEL + +I   +IW  RN
Subjt:  TTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN

XP_042942883.1 uncharacterized protein LOC122277065 [Carya illinoinensis]3.5e-2029.34Show/hide
Query:  PTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRE
        P  +  ++D ++WH  K GSFSV+S Y +  + +M+ +   S +     +WNKLW+    P  K+  W+   D LPT+ N+ K+ I  +P    C  + E
Subjt:  PTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRE

Query:  TTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN
        +T H++W C   K+VW    P S  L           +++  M + LN +E+ + +++  ++W  RN
Subjt:  TTSHLIWGCNLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRN

TrEMBL top hitse value%identityAlignment
A0A2N9EU07 Uncharacterized protein1.8e-2230.98Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK
        +P   R  +D+++W     G FSV+S Y + + E + S  ++ S  S +  LW+ +W+S V P+ ++  W+   DILPT+T +  KG+  +    +C  +
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK

Query:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISAD
         ET SH++W C+  ++VW   P+ IP+S      C EN + +D+    +D L   ++A      W+IW  RNR    N+  + D
Subjt:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISAD

A0A2N9FC29 Reverse transcriptase domain-containing protein5.7e-2431.63Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK
        +P  +R  +D+++W     G FSVKS Y L + E + S  ++ S  S +  LW+ +W+S V P+ ++  W+   DILPT+T +  KGI  +    +C   
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK

Query:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISADWILQSSEASIKE
         ET+SH++W C   ++VW   P+ IP+S      C EN S +D+    +D L   ++A      W+IW  RNR    N+  + D I + +   + +
Subjt:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISADWILQSSEASIKE

A0A2N9GW67 Uncharacterized protein3.1e-2229.32Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKR
        +P   R  +D+++W   K G+F+VKS Y+L +N+      + S+    +SLW ++W++ V P+ ++  W+  +DILPTKT +  KG+  +    +C  + 
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKR

Query:  ETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISADWILQSSEA
        E++SH++W C+  +++W   P+ IP      S C  + + KD+    +D L+  +        W+IW  RNR    N   + + I Q + A
Subjt:  ETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISADWILQSSEA

A0A2N9HNV5 Uncharacterized protein2.2e-2333.15Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK
        +P   R   D+++W     G FSVKS Y L + E + S  +T S  S +  LW+ +W+S V P+ ++  W+   DI+PT+T +  KGI  +    +C  +
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNE-DMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK

Query:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISAD
         ET+SH++W C   ++VW   PI IP+S      C EN S +D+    +D  +  ++A      W+IW  RNR    N+  + D
Subjt:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISAD

A0A2N9IMU5 Uncharacterized protein6.9e-2230.17Show/hide
Query:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSD-NSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK
        +P   R  +D+++W   K G+FSVKS Y L +++      + S+  S    LW+ +W++ V P+ ++  W+   DILPTKT +  KG+  +    +C   
Subjt:  MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSD-NSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNK

Query:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQ
         ET SH++W C   + +W   P++IP+S      C  + + +D+    +DNL++ +      + W+IW  RNR    N+
Subjt:  RETTSHLIWGCNLVKEVW---PILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.9e-0427.96Show/hide
Query:  LTMNEDMSHEATQS----DNSRESSLWNK-LWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRETTSHLIWGCNLVKEVW
        L  N+++  EAT +    +   E   W K +W     P+     W  +   L TK  ++  G    P   FC    ET  HL + C   +EVW
Subjt:  LTMNEDMSHEATQS----DNSRESSLWNK-LWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRETTSHLIWGCNLVKEVW

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0530.36Show/hide
Query:  LWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRETTSHLIWGC
        +W+  + P+ K+  WK +N+ LP    +L + I + P+   CR+  ET +H+++ C
Subjt:  LWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRETTSHLIWGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACTGGCAACAGAGGCGCTAAGGATGAAATAGTGTGGCACCCTGACAAGAAAGGATCATTCTCTGTCAAAAGTGTTTATAGACTGACTATGAATGAGGATATGTC
TCATGAAGCCACCCAATCCGACAACAGCAGAGAATCATCCCTATGGAACAAGTTATGGAATTCCAACGTTTTCCCTCGGGCTAAAGTGTGTACTTGGAAGATCATAAATG
ACATTCTTCCTACTAAAACAAACATTCTCAAAAAGGGAATTGACCTCAATCCTTACTGGTATTTTTGTAGGAATAAGAGAGAGACTACATCCCATCTGATTTGGGGATGC
AATTTGGTGAAAGAAGTGTGGCCTATATTAATTCCTAATTCTCTCACTTTACTGTCTGTGTGCAAGGAAAATTGGTCAGCTAAGGACTACTGGGGATGGATGGTCGATAA
CTTAAACAAAGAGGAATTAGCAAAAGGAATCATCCTTATGTGGAAAATCTGGGAATTCAGAAATAGAGCAACAGTTCACAATCAACAAATCTCAGCAGATTGGATTCTCC
AAAGCTCCGAAGCCAGCATTAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACTGGCAACAGAGGCGCTAAGGATGAAATAGTGTGGCACCCTGACAAGAAAGGATCATTCTCTGTCAAAAGTGTTTATAGACTGACTATGAATGAGGATATGTC
TCATGAAGCCACCCAATCCGACAACAGCAGAGAATCATCCCTATGGAACAAGTTATGGAATTCCAACGTTTTCCCTCGGGCTAAAGTGTGTACTTGGAAGATCATAAATG
ACATTCTTCCTACTAAAACAAACATTCTCAAAAAGGGAATTGACCTCAATCCTTACTGGTATTTTTGTAGGAATAAGAGAGAGACTACATCCCATCTGATTTGGGGATGC
AATTTGGTGAAAGAAGTGTGGCCTATATTAATTCCTAATTCTCTCACTTTACTGTCTGTGTGCAAGGAAAATTGGTCAGCTAAGGACTACTGGGGATGGATGGTCGATAA
CTTAAACAAAGAGGAATTAGCAAAAGGAATCATCCTTATGTGGAAAATCTGGGAATTCAGAAATAGAGCAACAGTTCACAATCAACAAATCTCAGCAGATTGGATTCTCC
AAAGCTCCGAAGCCAGCATTAAGGAATGA
Protein sequenceShow/hide protein sequence
MPTGNRGAKDEIVWHPDKKGSFSVKSVYRLTMNEDMSHEATQSDNSRESSLWNKLWNSNVFPRAKVCTWKIINDILPTKTNILKKGIDLNPYWYFCRNKRETTSHLIWGC
NLVKEVWPILIPNSLTLLSVCKENWSAKDYWGWMVDNLNKEELAKGIILMWKIWEFRNRATVHNQQISADWILQSSEASIKE