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Lag0019464 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019464
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich RNA-binding protein GRP2A-like
Genome locationchr5:42540779..42541417
RNA-Seq ExpressionLag0019464
SyntenyLag0019464
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649249.1 hypothetical protein Csa_015081, partial [Cucumis sativus]1.2e-2147.81Show/hide
Query:  MLFDMKPSVIIFIICASLIAVVVILCCFCIIG-GRKKKESTR-PSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE
        ML D+KPS++I IIC SL+ V  ILCCFCIIG G +KK++ + P+ S S   SRP     QTY D+EFG GIRTY +  T RSE+SI +  R  G+QR E
Subjt:  MLFDMKPSVIIFIICASLIAVVVILCCFCIIG-GRKKKESTR-PSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE

Query:  PSIWT--------ERSL-----SSQRSEPSVRTDRQAGAQ---------RISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDG
         SI+T        E+S+     SS+R+E S+  D Q+  +         R S IKDGGMAILAGAGAAIATAA VLG SS    E  DG Y+ +  C DG
Subjt:  PSIWT--------ERSL-----SSQRSEPSVRTDRQAGAQ---------RISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDG

Query:  SRGDDYADSYGGGGACGAGCGSGGGGGG
        +          GGG  G G GS   G G
Subjt:  SRGDDYADSYGGGGACGAGCGSGGGGGG

KAG6600486.1 hypothetical protein SDJN03_05719, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3859.55Show/hide
Query:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR--PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEP
        +FD+KPS+II IICASL+A VVILCC CII GRK+K+STRP+ SGS  S R  P PW  Q+YYDVE G GIR + RQDT RSEQS+  +DR  G QRSE 
Subjt:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR--PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEP

Query:  -SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGAC
         S  T+RS SSQ SEPSV  D++      SG KDGGMAI AGAGAA+A AAA LG SS  G++ G  GDGY GD S  D Y DS          GGGG C
Subjt:  -SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGAC

Query:  GAGCGSGGGGGGGCGGACGS
        GAGCGS G      G ACGS
Subjt:  GAGCGSGGGGGGGCGGACGS

XP_022142785.1 ctenidin-3-like [Momordica charantia]2.5e-1945.98Show/hide
Query:  MKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSRPQPWRPQTY--YDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW
        MKP   I IIC+S+IA VVILCC CII GRKKKE+ R + + SS      PW  QTY  +D+E G G RT NRQ                          
Subjt:  MKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSRPQPWRPQTY--YDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW

Query:  TERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSSEGEDG-------------GYIGDGYCGDGSRGDDYAD-SYGGGGAC
                               R SGIKDGGMAILAGAG AIATAA + G SSEG +G             GY  DG CGDG  G D  D   GGGG C
Subjt:  TERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSSEGEDG-------------GYIGDGYCGDGSRGDDYAD-SYGGGGAC

Query:  GAGCGSGGGGGGGCGGACGSGSRL
        G G G GGG GGGCGG CG GS L
Subjt:  GAGCGSGGGGGGGCGGACGSGSRL

XP_022942031.1 glycine-rich RNA-binding protein GRP2A-like [Cucurbita moschata]2.9e-3959.73Show/hide
Query:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR---PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE
        +FD+KPS+II IICASL+A VVILCC CII GRK+K+STRP+ SGS  S R   P PW  Q+YYDVE G GIR Y RQDT RSEQS+  +DR  G QRSE
Subjt:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR---PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE

Query:  P-SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGA
          S  T+RS S+Q SEPSV  D++      SG KDGGMAI AGAGAA+A AAA LG SS  G++ G  GDGY GD SR D Y DS          GGGG 
Subjt:  P-SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGA

Query:  CGAGCGSGGGGGGGCGGACGS
        CGAGCGS G      G ACGS
Subjt:  CGAGCGSGGGGGGGCGGACGS

XP_023543717.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]4.0e-4160.91Show/hide
Query:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR--PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEP
        +FD+KPS+II IICASL+A VVILCC CII GR++K+STRP+ SGS  S R  P PW  Q+YYDVE G GIR Y RQDT RSEQS+  +DR  G QRSE 
Subjt:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR--PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEP

Query:  -SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADSY---------GGGGAC
         S  T+RS SSQ SEPSV  D+Q      SG KDGGMAILAGAGAA+A AAA +G SS  G++ G  GDGY GDGSR D Y DS+         GGGG C
Subjt:  -SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADSY---------GGGGAC

Query:  GAGCGSGGGGGGGCGGACGS
        GAGCGS G      G ACGS
Subjt:  GAGCGSGGGGGGGCGGACGS

TrEMBL top hitse value%identityAlignment
A0A0A0L0B2 Uncharacterized protein5.9e-2247.81Show/hide
Query:  MLFDMKPSVIIFIICASLIAVVVILCCFCIIG-GRKKKESTR-PSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE
        ML D+KPS++I IIC SL+ V  ILCCFCIIG G +KK++ + P+ S S   SRP     QTY D+EFG GIRTY +  T RSE+SI +  R  G+QR E
Subjt:  MLFDMKPSVIIFIICASLIAVVVILCCFCIIG-GRKKKESTR-PSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE

Query:  PSIWT--------ERSL-----SSQRSEPSVRTDRQAGAQ---------RISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDG
         SI+T        E+S+     SS+R+E S+  D Q+  +         R S IKDGGMAILAGAGAAIATAA VLG SS    E  DG Y+ +  C DG
Subjt:  PSIWT--------ERSL-----SSQRSEPSVRTDRQAGAQ---------RISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDG

Query:  SRGDDYADSYGGGGACGAGCGSGGGGGG
        +          GGG  G G GS   G G
Subjt:  SRGDDYADSYGGGGACGAGCGSGGGGGG

A0A5A7VBP6 Uncharacterized protein8.5e-1345.97Show/hide
Query:  GGRKKKES-TRPSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW--------TERSL-----SSQRSE----
        GG KKK++   P+ S S   SRP     QTY DVEFG GIRTY +  T RSEQSI    R  G+QR E SI+        +E+S+     SS+R+E    
Subjt:  GGRKKKES-TRPSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW--------TERSL-----SSQRSE----

Query:  --------PSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDGSRGDDYADSYGGGGACGAGCGSGGGGGGG
                 S R DRQ    R S IKDGGMAILAGAGAAIATAA VLG SS    E  DGGY+ +  CGDG+                   GSG  GGGG
Subjt:  --------PSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS----EGEDGGYIGDGYCGDGSRGDDYADSYGGGGACGAGCGSGGGGGGG

Query:  CGGACGSGSRL
           +CG+GS+L
Subjt:  CGGACGSGSRL

A0A6J1CLX2 ctenidin-3-like1.2e-1945.98Show/hide
Query:  MKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSRPQPWRPQTY--YDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW
        MKP   I IIC+S+IA VVILCC CII GRKKKE+ R + + SS      PW  QTY  +D+E G G RT NRQ                          
Subjt:  MKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSRPQPWRPQTY--YDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIW

Query:  TERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSSEGEDG-------------GYIGDGYCGDGSRGDDYAD-SYGGGGAC
                               R SGIKDGGMAILAGAG AIATAA + G SSEG +G             GY  DG CGDG  G D  D   GGGG C
Subjt:  TERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSSEGEDG-------------GYIGDGYCGDGSRGDDYAD-SYGGGGAC

Query:  GAGCGSGGGGGGGCGGACGSGSRL
        G G G GGG GGGCGG CG GS L
Subjt:  GAGCGSGGGGGGGCGGACGSGSRL

A0A6J1FMR9 glycine-rich RNA-binding protein GRP2A-like1.4e-3959.73Show/hide
Query:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR---PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE
        +FD+KPS+II IICASL+A VVILCC CII GRK+K+STRP+ SGS  S R   P PW  Q+YYDVE G GIR Y RQDT RSEQS+  +DR  G QRSE
Subjt:  LFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSR---PQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSE

Query:  P-SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGA
          S  T+RS S+Q SEPSV  D++      SG KDGGMAI AGAGAA+A AAA LG SS  G++ G  GDGY GD SR D Y DS          GGGG 
Subjt:  P-SIWTERSLSSQRSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSS-EGEDGGYIGDGYCGDGSRGDDYADS---------YGGGGA

Query:  CGAGCGSGGGGGGGCGGACGS
        CGAGCGS G      G ACGS
Subjt:  CGAGCGSGGGGGGGCGGACGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTTGACATGAAACCTTCAGTCATCATTTTCATAATCTGTGCTTCTTTAATAGCTGTTGTTGTGATTTTATGTTGTTTTTGTATAATTGGAGGTCGTAAAAAGAA
AGAATCGACACGGCCTAGCGTAAGCGGATCGTCTATTAGTTCAAGGCCGCAACCATGGCGGCCCCAAACGTACTATGATGTTGAGTTCGGACCAGGCATTCGAACATACA
ACAGACAAGACACTCAAAGAAGCGAACAAAGCATTCGAACGACAGACAGACAAGCCGGCACTCAAAGAAGCGAACCGAGCATTTGGACAGAAAGATCACTAAGCAGTCAA
CGAAGCGAACCAAGCGTTCGAACAGACAGACAAGCTGGCGCTCAAAGAATTAGCGGAATCAAGGATGGTGGGATGGCCATCTTGGCTGGAGCAGGTGCTGCTATAGCTAC
TGCAGCTGCGGTCCTTGGTTTCAGTAGTGAAGGAGAAGATGGTGGCTATATTGGTGATGGTTATTGTGGAGATGGCAGCCGGGGCGATGACTATGCCGATAGTTATGGCG
GTGGTGGTGCCTGTGGCGCTGGCTGTGGAAGTGGCGGTGGTGGCGGCGGCGGCTGTGGTGGTGCCTGTGGCAGTGGCTCTCGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTTGACATGAAACCTTCAGTCATCATTTTCATAATCTGTGCTTCTTTAATAGCTGTTGTTGTGATTTTATGTTGTTTTTGTATAATTGGAGGTCGTAAAAAGAA
AGAATCGACACGGCCTAGCGTAAGCGGATCGTCTATTAGTTCAAGGCCGCAACCATGGCGGCCCCAAACGTACTATGATGTTGAGTTCGGACCAGGCATTCGAACATACA
ACAGACAAGACACTCAAAGAAGCGAACAAAGCATTCGAACGACAGACAGACAAGCCGGCACTCAAAGAAGCGAACCGAGCATTTGGACAGAAAGATCACTAAGCAGTCAA
CGAAGCGAACCAAGCGTTCGAACAGACAGACAAGCTGGCGCTCAAAGAATTAGCGGAATCAAGGATGGTGGGATGGCCATCTTGGCTGGAGCAGGTGCTGCTATAGCTAC
TGCAGCTGCGGTCCTTGGTTTCAGTAGTGAAGGAGAAGATGGTGGCTATATTGGTGATGGTTATTGTGGAGATGGCAGCCGGGGCGATGACTATGCCGATAGTTATGGCG
GTGGTGGTGCCTGTGGCGCTGGCTGTGGAAGTGGCGGTGGTGGCGGCGGCGGCTGTGGTGGTGCCTGTGGCAGTGGCTCTCGACTCTGA
Protein sequenceShow/hide protein sequence
MLFDMKPSVIIFIICASLIAVVVILCCFCIIGGRKKKESTRPSVSGSSISSRPQPWRPQTYYDVEFGPGIRTYNRQDTQRSEQSIRTTDRQAGTQRSEPSIWTERSLSSQ
RSEPSVRTDRQAGAQRISGIKDGGMAILAGAGAAIATAAAVLGFSSEGEDGGYIGDGYCGDGSRGDDYADSYGGGGACGAGCGSGGGGGGGCGGACGSGSRL