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Lag0019486 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019486
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionanaphase-promoting complex subunit 6-like
Genome locationchr5:42708764..42709736
RNA-Seq ExpressionLag0019486
SyntenyLag0019486
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577034.1 Anaphase-promoting complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3896.47Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        MYREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

KAG7015055.1 Anaphase-promoting complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3896.47Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        MYREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

XP_022931441.1 anaphase-promoting complex subunit 6-like [Cucurbita moschata]8.2e-3896.47Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        MYREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

XP_022980182.1 anaphase-promoting complex subunit 6-like isoform X4 [Cucurbita maxima]3.1e-3794.12Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        +YREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLS+ALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

XP_023551896.1 anaphase-promoting complex subunit 6-like [Cucurbita pepo subsp. pepo]8.2e-3896.47Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        MYREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

TrEMBL top hitse value%identityAlignment
A0A6J1ETN4 anaphase-promoting complex subunit 6-like4.0e-3896.47Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        MYREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

A0A6J1FNN6 anaphase-promoting complex subunit 6-like isoform X15.8e-3792.94Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        ++REAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLS+ALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

A0A6J1FQ21 anaphase-promoting complex subunit 6-like isoform X25.8e-3792.94Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        ++REAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLS+ALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

A0A6J1IQP6 anaphase-promoting complex subunit 6-like isoform X41.5e-3794.12Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        +YREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLS+ALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

A0A6J1IYK2 anaphase-promoting complex subunit 6-like isoform X31.5e-3794.12Show/hide
Query:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV
        +YREAI YYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLS+ALMDE Q GMDPKADLRRSEVFV
Subjt:  MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV

SwissProt top hitse value%identityAlignment
B3DNN5 Anaphase-promoting complex subunit 61.6e-2877.63Show/hide
Query:  REAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADL
        REAI+YYE+AL LST+SLSTY+GLAYTYHLQ +F+AAI+YYHKALWLKPDDQFCTEML++ALMDE Q G+D K +L
Subjt:  REAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADL

Q13042 Cell division cycle protein 16 homolog1.5e-0540.68Show/hide
Query:  YREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEML
        Y EA+ Y+ +AL L  ++ STY+ + Y + L  +F  A+ Y+H AL L+ DD F   ML
Subjt:  YREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEML

Q1ZXE6 Anaphase-promoting complex subunit 64.3e-0543.33Show/hide
Query:  AITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLAL
        A+ YY  +L+L   + STY+ L +T+HLQ +F  AI YYH++L ++ DD F   +L  AL
Subjt:  AITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLAL

Q8R349 Cell division cycle protein 16 homolog1.5e-0540.68Show/hide
Query:  YREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEML
        Y EA+ Y+ +AL L  ++ STY+ + Y + L  +F  A+ Y+H AL L+ DD F   ML
Subjt:  YREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEML

Arabidopsis top hitse value%identityAlignment
AT1G78770.1 anaphase promoting complex 61.2e-2977.63Show/hide
Query:  REAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADL
        REAI+YYE+AL LST+SLSTY+GLAYTYHLQ +F+AAI+YYHKALWLKPDDQFCTEML++ALMDE Q G+D K +L
Subjt:  REAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCGTGAAGCAATCACATACTATGAGAAAGCACTTGCGTTATCAACAAGAAGTCTTAGCACTTATGCTGGTCTTGCATATACTTATCATTTGCAGGATCATTTCAC
TGCAGCCATTACGTATTACCACAAGGCTTTGTGGCTGAAACCAGATGATCAGTTCTGCACTGAGATGTTAAGTTTAGCTCTTATGGACGAAAGCCAAAAAGGGATGGATC
CAAAGGCAGACCTTCGGCGGAGTGAGGTCTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCGTGAAGCAATCACATACTATGAGAAAGCACTTGCGTTATCAACAAGAAGTCTTAGCACTTATGCTGGTCTTGCATATACTTATCATTTGCAGGATCATTTCAC
TGCAGCCATTACGTATTACCACAAGGCTTTGTGGCTGAAACCAGATGATCAGTTCTGCACTGAGATGTTAAGTTTAGCTCTTATGGACGAAAGCCAAAAAGGGATGGATC
CAAAGGCAGACCTTCGGCGGAGTGAGGTCTTTGTTTAA
Protein sequenceShow/hide protein sequence
MYREAITYYEKALALSTRSLSTYAGLAYTYHLQDHFTAAITYYHKALWLKPDDQFCTEMLSLALMDESQKGMDPKADLRRSEVFV