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Lag0019501 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019501
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein trichome birefringence-like 42
Genome locationchr5:42816776..42817374
RNA-Seq ExpressionLag0019501
SyntenyLag0019501
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domainsIPR025846 - PMR5 N-terminal domain
IPR029962 - Trichome birefringence-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059051.1 protein VTE6 [Cucumis melo var. makuwa]4.8e-3066Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +A RF GGV+FLI LQI  RR    GDS S  +  +  +NN+ C FY+GSWVYD SYPLYD SNCPF+GDGF CR+NGR D+DYLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

TXG66670.1 hypothetical protein EZV62_007945 [Acer yangbiense]2.5e-1853.75Show/hide
Query:  GDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        G ++S   +++  SN   C F+EGSWVYD SYP+YD SNCPF+  GF+C++NGR D DYLK++WQP+RCDLP  +  +F+
Subjt:  GDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

XP_004137309.1 protein trichome birefringence-like 42 [Cucumis sativus]1.2e-3369Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +  RF GGV+FLI LQI  RRG V GDS    +  +  +NN+GC FYEGSWVYDVSYPLYD SNCPF+GDGFNC++NGR DS+YLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

XP_008451728.1 PREDICTED: protein trichome birefringence-like 42 [Cucumis melo]2.8e-3066Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +A RF GGV+FLI LQI  RR    GDS S  +  +  +NN+ C FY+GSWVYD SYPLYD SNCPF+GDGF CR+NGR D+DYLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

XP_019104304.1 PREDICTED: protein trichome birefringence-like 42 [Beta vulgaris subsp. vulgaris]4.2e-1869.09Show/hide
Query:  DGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDL
        DGC  ++GSWVYD SYPLYD  NCPF+G GF+C++NGR D DYLK+RWQP+ CDL
Subjt:  DGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDL

TrEMBL top hitse value%identityAlignment
A0A0A0L0D7 PMR5N domain-containing protein5.9e-3469Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +  RF GGV+FLI LQI  RRG V GDS    +  +  +NN+GC FYEGSWVYDVSYPLYD SNCPF+GDGFNC++NGR DS+YLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

A0A1S3BSZ2 protein trichome birefringence-like 421.4e-3066Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +A RF GGV+FLI LQI  RR    GDS S  +  +  +NN+ C FY+GSWVYD SYPLYD SNCPF+GDGF CR+NGR D+DYLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

A0A5A7UZZ0 Protein VTE62.3e-3066Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +A RF GGV+FLI LQI  RR    GDS S  +  +  +NN+ C FY+GSWVYD SYPLYD SNCPF+GDGF CR+NGR D+DYLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

A0A5C7IBE1 PMR5N domain-containing protein1.2e-1853.75Show/hide
Query:  GDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        G ++S   +++  SN   C F+EGSWVYD SYP+YD SNCPF+  GF+C++NGR D DYLK++WQP+RCDLP  +  +F+
Subjt:  GDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

A0A5D3CXL9 Protein trichome birefringence-like 421.4e-3066Show/hide
Query:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        MA +A RF GGV+FLI LQI  RR    GDS S  +  +  +NN+ C FY+GSWVYD SYPLYD SNCPF+GDGF CR+NGR D+DYLKFRWQP RCDLP
Subjt:  MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

SwissProt top hitse value%identityAlignment
F4K5K4 Protein trichome birefringence-like 59.1e-1653.12Show/hide
Query:  GCGFYEGSWVY-DVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        GC  Y+GSWV  D  YPLY   +CP+V D F+C++NGR+DSDYL +RW+P  CDLP  +  +F+
Subjt:  GCGFYEGSWVY-DVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

O22960 Protein trichome birefringence-like 372.2e-1444Show/hide
Query:  AVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        AV G       LK G     GC  ++G WV+D SYP YD S CPF+   F+C + GR D  +LK+ WQP  C +P
Subjt:  AVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

Q5BPJ0 Protein trichome birefringence-like 116.5e-1450Show/hide
Query:  NNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        + +GC  + G WV+D SYPLY   +C F+ +GF C + GR D  Y K+RWQP+ CDLP
Subjt:  NNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

Q6DR10 Protein trichome birefringence-like 431.8e-1951.9Show/hide
Query:  DSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        +S+S      G      C  Y+GSWVYD SYPLYD  NCPF+   FNC+ NGR DS+YLK+RWQPS C+LP  +  +F+
Subjt:  DSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

Q9SIN2 Protein trichome birefringence-like 392.4e-1643.68Show/hide
Query:  SSSTGRLKQGNSNND---------GCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        S+ +  +   +SNND          C ++ G+WVYDV YPLYD   CPF+   FNC++ GR D+ YLK+RWQPS C LP  +   F+
Subjt:  SSSTGRLKQGNSNND---------GCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

Arabidopsis top hitse value%identityAlignment
AT2G30900.1 TRICHOME BIREFRINGENCE-LIKE 431.3e-2051.9Show/hide
Query:  DSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        +S+S      G      C  Y+GSWVYD SYPLYD  NCPF+   FNC+ NGR DS+YLK+RWQPS C+LP  +  +F+
Subjt:  DSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

AT2G31110.2 Plant protein of unknown function (DUF828)4.6e-1550Show/hide
Query:  CGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        C    G WVYD SYPLY   +CPF+   FNC++ GR D++Y  FRWQP  C LP     NF+
Subjt:  CGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

AT2G34070.1 TRICHOME BIREFRINGENCE-LIKE 371.6e-1544Show/hide
Query:  AVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP
        AV G       LK G     GC  ++G WV+D SYP YD S CPF+   F+C + GR D  +LK+ WQP  C +P
Subjt:  AVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLP

AT2G42570.1 TRICHOME BIREFRINGENCE-LIKE 391.7e-1743.68Show/hide
Query:  SSSTGRLKQGNSNND---------GCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        S+ +  +   +SNND          C ++ G+WVYDV YPLYD   CPF+   FNC++ GR D+ YLK+RWQPS C LP  +   F+
Subjt:  SSSTGRLKQGNSNND---------GCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV

AT5G20590.1 TRICHOME BIREFRINGENCE-LIKE 56.5e-1753.12Show/hide
Query:  GCGFYEGSWVY-DVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV
        GC  Y+GSWV  D  YPLY   +CP+V D F+C++NGR+DSDYL +RW+P  CDLP  +  +F+
Subjt:  GCGFYEGSWVY-DVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTCCGCCGCCCGGTTCTGCGGCGGCGTTTTGTTTCTCATTTCTCTGCAAATCTTCCACCGCCGTGGGGCCGTCGTCGGAGACAGTTCTTCGACGGGGCGGCT
GAAGCAGGGGAATAGTAATAATGATGGGTGTGGGTTTTACGAAGGCAGCTGGGTTTACGACGTGTCGTACCCGCTTTACGACGTGTCGAATTGCCCCTTCGTCGGAGACG
GATTTAACTGCCGGCAGAATGGCCGCCAGGACTCCGACTACCTCAAGTTCCGGTGGCAGCCCAGTCGCTGCGACCTCCCCAGTTCCAGTACTTTCAATTTTGTAACAATT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTCCGCCGCCCGGTTCTGCGGCGGCGTTTTGTTTCTCATTTCTCTGCAAATCTTCCACCGCCGTGGGGCCGTCGTCGGAGACAGTTCTTCGACGGGGCGGCT
GAAGCAGGGGAATAGTAATAATGATGGGTGTGGGTTTTACGAAGGCAGCTGGGTTTACGACGTGTCGTACCCGCTTTACGACGTGTCGAATTGCCCCTTCGTCGGAGACG
GATTTAACTGCCGGCAGAATGGCCGCCAGGACTCCGACTACCTCAAGTTCCGGTGGCAGCCCAGTCGCTGCGACCTCCCCAGTTCCAGTACTTTCAATTTTGTAACAATT
TAG
Protein sequenceShow/hide protein sequence
MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFVTI