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Lag0019534 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019534
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein CUP-SHAPED COTYLEDON 2-like
Genome locationchr5:43118845..43119276
RNA-Seq ExpressionLag0019534
SyntenyLag0019534
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577005.1 Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3764.58Show/hide
Query:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS
        MHGG + +KTRL+PEPSSPSSVSLPPLLDSS  PS                EHELHVTCFSTNN+N+     AGGG DLS S FP+L S QENLQ  FFS
Subjt:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS

Query:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        PVGPPLVHLL    +L GCG  P PE+SRL+GSADM A YMWTF
Subjt:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

KAG6600382.1 Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5072.55Show/hide
Query:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPY---------PSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ
        MHGG MKKTR +PEP+SPSSVSLPPLLDSSPY          ++AFA+RDG SSLDD  EHELHVTCFSTNNL++ AA   AGGG +LS SAFPNLRS+Q
Subjt:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPY---------PSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ

Query:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        ENLQ  FFSPV PPLVHLL+G  D+DGCGGAP PE+SR MGSAD+GA YMWTF
Subjt:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

KAG7031044.1 Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-5072.55Show/hide
Query:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPY---------PSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ
        MHGG MKKTR +PEP+SPSSVSLPPLLDSSPY          ++AFA+RDG SSLDD  EHELHVTCFSTNNL++ AA   AGGG +LS SAFPNLRS+Q
Subjt:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPY---------PSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ

Query:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        ENLQ  FFSPV PPLVHLL+G  D+DGCGGAP PE+SR MGSAD+GA YMWTF
Subjt:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

XP_022942010.1 protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]5.4e-5073.2Show/hide
Query:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ
        MHGG MKKTR +PEP+SPSSVSLPPLLDSSPY SA         AFA+RDG SSLDD  EH+LHVTCFSTNNL++ AA   AGGG +LS SAFPNLRS+Q
Subjt:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ

Query:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        ENLQ  FFSPV PPLVHLL+G  D+DGCGGAP PE+SR MGSAD+GA YMWTF
Subjt:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

XP_023543274.1 protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]1.1e-5073.2Show/hide
Query:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ
        MHGG MKKTR +PEP+SPSSVSLPPLLDSSPY SA         AFA+R+G SSLDD  EHELHVTCFSTNNL++ AA   AGGGP+LS SAFPNLRS+Q
Subjt:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ

Query:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        ENLQ  FFSPV PPLVHLL+G  D+DGCGGAP PE+SR +GSAD+GA YMWTF
Subjt:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

TrEMBL top hitse value%identityAlignment
A0A5A7UVV9 Protein CUP-SHAPED COTYLEDON 2-like3.8e-3364.67Show/hide
Query:  MHGGAMKKT-RLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSL----DDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQ-
        MHGGAMKKT R NPEPSSPSSVSLPPLLDSSPY SAA AD   SS+     DD+ EHELHVTCFSTNNLN+ +          SASAFP   S QENLQ 
Subjt:  MHGGAMKKT-RLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSL----DDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQ-

Query:  PAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAY-YMWTF
        P   SPVGP LVHL+AG  +LDGCGG P PE     GSAD+ A  YMW F
Subjt:  PAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAY-YMWTF

A0A6J1CNU6 protein CUP-SHAPED COTYLEDON 2-like1.7e-3664.83Show/hide
Query:  GGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFSPVG
        GGAMKK++LNPEPSSPSSVSLPPLLDSSPYPSAAF +RDG  SLDD  EHELHVTCFSTNN    A   +GGG D S S FP+L+S        FFS V 
Subjt:  GGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFSPVG

Query:  P----PLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        P    PL HLLAGG D DGCGG    EESR +G ADM     WTF
Subjt:  P----PLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

A0A6J1E4T0 protein CUP-SHAPED COTYLEDON 2-like8.8e-3864.58Show/hide
Query:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS
        MHGG + +KTRL+PEPSSPS VSLPPLLDSS  PS                EHELHVTCFSTNN+N+     AGGG DLS S FPNL S QENLQ  FFS
Subjt:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS

Query:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        PVGPPLVHLL    +L GCG  P PE+SRL+GSADM A YMWTF
Subjt:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

A0A6J1FVE0 protein CUP-SHAPED COTYLEDON 2-like2.6e-5073.2Show/hide
Query:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ
        MHGG MKKTR +PEP+SPSSVSLPPLLDSSPY SA         AFA+RDG SSLDD  EH+LHVTCFSTNNL++ AA   AGGG +LS SAFPNLRS+Q
Subjt:  MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSA---------AFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAG-EAGGGPDLSASAFPNLRSLQ

Query:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        ENLQ  FFSPV PPLVHLL+G  D+DGCGGAP PE+SR MGSAD+GA YMWTF
Subjt:  ENLQPAFFSPVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

A0A6J1JAG2 protein CUP-SHAPED COTYLEDON 2-like9.7e-3763.89Show/hide
Query:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS
        MHGG + KK RL+PEPSSPSSVSLPP LDSS  PS                E+ELHVTCFSTNN+N+     AGGG DLS S FPNL S QENLQ  FFS
Subjt:  MHGG-AMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFS

Query:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF
        PVGPPLVHLL    +L GCG  P PE+SRL+GSADM A YMWTF
Subjt:  PVGPPLVHLLAGGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGGCGGCGCAATGAAGAAGACTCGCCTGAATCCCGAACCCAGTTCCCCTTCCTCAGTGTCTCTACCCCCTCTTCTCGACTCATCTCCCTACCCCTCCGCCGCCTT
CGCCGACCGCGACGGCAGCAGCTCTCTCGACGACTCAACGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTCAACCACTTCGCCGCCGGGGAAGCGGGCG
GCGGCCCTGATCTCTCGGCCTCGGCGTTCCCGAACCTCCGGAGCCTCCAGGAGAATCTGCAGCCGGCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTCCTGGCC
GGCGGCGGCGACTTGGATGGGTGCGGCGGTGCTCCGGTGCCGGAGGAATCTAGGCTTATGGGTTCGGCTGACATGGGTGCTTATTATATGTGGACCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACGGCGGCGCAATGAAGAAGACTCGCCTGAATCCCGAACCCAGTTCCCCTTCCTCAGTGTCTCTACCCCCTCTTCTCGACTCATCTCCCTACCCCTCCGCCGCCTT
CGCCGACCGCGACGGCAGCAGCTCTCTCGACGACTCAACGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTCAACCACTTCGCCGCCGGGGAAGCGGGCG
GCGGCCCTGATCTCTCGGCCTCGGCGTTCCCGAACCTCCGGAGCCTCCAGGAGAATCTGCAGCCGGCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTCCTGGCC
GGCGGCGGCGACTTGGATGGGTGCGGCGGTGCTCCGGTGCCGGAGGAATCTAGGCTTATGGGTTCGGCTGACATGGGTGCTTATTATATGTGGACCTTCTGA
Protein sequenceShow/hide protein sequence
MHGGAMKKTRLNPEPSSPSSVSLPPLLDSSPYPSAAFADRDGSSSLDDSTEHELHVTCFSTNNLNHFAAGEAGGGPDLSASAFPNLRSLQENLQPAFFSPVGPPLVHLLA
GGGDLDGCGGAPVPEESRLMGSADMGAYYMWTF