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Lag0019572 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019572
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFerredoxin
Genome locationchr5:43416960..43417397
RNA-Seq ExpressionLag0019572
SyntenyLag0019572
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR006058 - 2Fe-2S ferredoxin, iron-sulphur binding site
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46312.1 Ferredoxin [2Fe-2S] [Parasponia andersonii]5.5e-4261.74Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   +RGGRVTAMA  +KVKLITP G+  F CPD+ Y+LD AE  GIDLPYSCRAG+CS+
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST

Query:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        CVGK+  G+VDQS NSFLDDDQ+A GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

PON48265.1 Ferredoxin [2Fe-2S] [Trema orientale]5.0e-4362.42Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   SRGGRVTAMA  +KVKL+TP G+  F CPD+ Y+LD AE VGIDLPYSCRAG+CS+
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST

Query:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        CVGK+  G+VDQS NSFLDDDQ+A GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

XP_022136605.1 ferredoxin-2-like [Momordica charantia]3.6e-4165.97Show/hide
Query:  MASTITAFSSLITTTSFL---QRRPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        M +T TA  S I  TSFL   + RPVS+VGE L GLQKG SR GRVTAMA  +KVKLITPSG++V +C D++YILD AE  G++LP+SCRAGACS+CVGK
Subjt:  MASTITAFSSLITTTSFL---QRRPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDE
        LKSGK+DQS  SFLD+DQI +GWVLTC+A P+SDVVI+T+  +E
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDE

XP_022136608.1 ferredoxin [Momordica charantia]1.5e-4263.76Show/hide
Query:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC
        MAS+ TA S  + +TSFL+++P      VS+ G+ L GL KGGSRGGRVTAMA  +KVKLITP G++ F+CPD+ Y+LD AE  G DLPYSCRAG+CS+C
Subjt:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC

Query:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
         GK+ SGKVDQS NSFLDDDQ+ +GWVLTCVAYP SD+VI+T+ E+EL+
Subjt:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

XP_030510578.1 ferredoxin [Cannabis sativa]1.1e-4262.67Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   GSRGGRVTAMA  +KVKLITP G+  F CPD+ Y+LD AE +G+DLPYSCRAG+CS
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS

Query:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        +CVGK+ SG VDQS NSFLDDDQI +GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

TrEMBL top hitse value%identityAlignment
A0A2P5BC06 Ferredoxin2.7e-4261.74Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   +RGGRVTAMA  +KVKLITP G+  F CPD+ Y+LD AE  GIDLPYSCRAG+CS+
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST

Query:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        CVGK+  G+VDQS NSFLDDDQ+A GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

A0A2P5BHJ1 Ferredoxin2.4e-4362.42Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   SRGGRVTAMA  +KVKL+TP G+  F CPD+ Y+LD AE VGIDLPYSCRAG+CS+
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACST

Query:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        CVGK+  G+VDQS NSFLDDDQ+A GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  CVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

A0A6J1C815 Ferredoxin7.0e-4363.76Show/hide
Query:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC
        MAS+ TA S  + +TSFL+++P      VS+ G+ L GL KGGSRGGRVTAMA  +KVKLITP G++ F+CPD+ Y+LD AE  G DLPYSCRAG+CS+C
Subjt:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC

Query:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
         GK+ SGKVDQS NSFLDDDQ+ +GWVLTCVAYP SD+VI+T+ E+EL+
Subjt:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

A0A7J6EFC8 Ferredoxin5.4e-4362.67Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   GSRGGRVTAMA  +KVKLITP G+  F CPD+ Y+LD AE +G+DLPYSCRAG+CS
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS

Query:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        +CVGK+ SG VDQS NSFLDDDQI +GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

A0A803Q7R7 Uncharacterized protein5.4e-4362.67Show/hide
Query:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS
        MA+T  A SS + +TSF++R+P +       +VG+ L GL+   GSRGGRVTAMA  +KVKLITP G+  F CPD+ Y+LD AE +G+DLPYSCRAG+CS
Subjt:  MASTITAFSSLITTTSFLQRRPVS-------DVGERLLGLQKG-GSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACS

Query:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        +CVGK+ SG VDQS NSFLDDDQI +GWVLTCVAYP SDVVI+T+ E+EL
Subjt:  TCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

SwissProt top hitse value%identityAlignment
O04090 Ferredoxin-1, chloroplastic1.5e-3754.79Show/hide
Query:  TAFSSLITTTSFLQRR--PVS------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        TA SS I +TSFL+R+  P+S         + L GL+   +RGGRVTAMA  +KVK ITP G++   C ++ Y+LD AE  G+DLPYSCRAG+CS+C GK
Subjt:  TAFSSLITTTSFLQRR--PVS------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
        + SG +DQS  SFLDD+Q+++G+VLTCVAYP SDVVI+T+ E+ +M
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

O04683 Ferredoxin-1, chloroplastic3.8e-3855.41Show/hide
Query:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC
        MA+T  A S    +T+F  + P       ++VG  L GL+   SR GRVTAMA  +KV L+TP G++   CPD+ YILD AE  GIDLPYSCRAG+CS+C
Subjt:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC

Query:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
         GK+ SG V+Q   SFLDDDQI +GWVLTCVAYP  DV I+T+ E+EL
Subjt:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

P00221 Ferredoxin-1, chloroplastic5.6e-3755.41Show/hide
Query:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC
        MA+T T    + TT     + P       S+ G  L GL K GSRGGR+T  A  +KV L+TP+G   F CPD+ YILD AE  GIDLPYSCRAG+CS+C
Subjt:  MASTITAFSSLITTTSFLQRRP------VSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTC

Query:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
         GKLK+G ++Q   SFLDDDQI +GWVLTC AYP+SDV I+T+ E+EL
Subjt:  VGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

P16972 Ferredoxin-2, chloroplastic1.1e-3755.48Show/hide
Query:  TAFSSLITTTSFLQRRPV--------SDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        TA SS I  TSF++R P         S   + L GL+ G +RGGRVTAMA  +KVK ITP G+    C D+ Y+LD AE  GIDLPYSCRAG+CS+C GK
Subjt:  TAFSSLITTTSFLQRRPV--------SDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
        + SG VDQS  SFLDD+QI +G+VLTC AYP SDV I+T+ E++++
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

Q9ZTS2 Ferredoxin, chloroplastic6.6e-3854.79Show/hide
Query:  ITAFSSLITTTSFLQR-------RPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        + + S+ + +TSF+ R       +P+ +VGE L GL+   + GG+VT MA  +KVKLITP G   F+CPDN YILD AE  G DLPYSCRAG+CS+C GK
Subjt:  ITAFSSLITTTSFLQR-------RPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
        +  G VDQ+  +FLDDDQ+ +GWVLTCVAYP SDV I+T+ E EL+
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 11.0e-3854.79Show/hide
Query:  TAFSSLITTTSFLQRR--PVS------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        TA SS I +TSFL+R+  P+S         + L GL+   +RGGRVTAMA  +KVK ITP G++   C ++ Y+LD AE  G+DLPYSCRAG+CS+C GK
Subjt:  TAFSSLITTTSFLQRR--PVS------DVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
        + SG +DQS  SFLDD+Q+++G+VLTCVAYP SDVVI+T+ E+ +M
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein5.7e-1337.5Show/hide
Query:  FNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
        F  P+++YIL  AE   I LP++CR G C++C  ++KSG++ Q     +  +  + G+ L CV +P SD+ ++T  EDE+
Subjt:  FNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein7.9e-3955.48Show/hide
Query:  TAFSSLITTTSFLQRRPV--------SDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK
        TA SS I  TSF++R P         S   + L GL+ G +RGGRVTAMA  +KVK ITP G+    C D+ Y+LD AE  GIDLPYSCRAG+CS+C GK
Subjt:  TAFSSLITTTSFLQRRPV--------SDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGK

Query:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM
        + SG VDQS  SFLDD+QI +G+VLTC AYP SDV I+T+ E++++
Subjt:  LKSGKVDQSANSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDELM

AT2G27510.1 ferredoxin 36.7e-3051.11Show/hide
Query:  SSLITTTSFLQRRPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQE-VFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSA
        + LIT  S+      +    R  GL+   + GG    M+  +KVKL+ P GQE  F   D++YILD AE  G+DLPYSCRAGACSTC G++ SG VDQS 
Subjt:  SSLITTTSFLQRRPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQE-VFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSA

Query:  NSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL
         SFL+D  +  G+VLTCVAYP SD VI T+ E EL
Subjt:  NSFLDDDQIADGWVLTCVAYPLSDVVIQTNMEDEL

AT5G10000.1 ferredoxin 45.5e-2449.12Show/hide
Query:  GLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNE--YILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPL
        GL       G+V A  +  KVKLI+P G+E      NE   IL+ AE  G++LPYSCR+G C TC GKL SGKVDQS  SFL+++QI  G++LTC+A PL
Subjt:  GLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNE--YILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSANSFLDDDQIADGWVLTCVAYPL

Query:  SDVVIQTNMEDELM
         D V+ T+ + +L+
Subjt:  SDVVIQTNMEDELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCACCATCACTGCATTTTCCAGCCTCATCACCACCACTTCCTTCCTCCAGCGCCGGCCGGTGTCGGACGTGGGCGAGCGTCTGCTCGGGCTGCAGAAGGGCGG
CAGCCGGGGCGGGCGAGTGACGGCGATGGCGAAGAAGCACAAGGTCAAGCTAATAACACCAAGTGGACAGGAAGTGTTCAACTGTCCGGATAATGAATACATTCTAGATG
GAGCTGAGATGGTAGGGATAGACCTTCCATACTCATGTAGAGCAGGAGCATGTTCTACATGTGTAGGGAAACTAAAATCAGGGAAGGTGGATCAGTCAGCTAATAGCTTC
CTTGATGATGATCAGATTGCAGATGGCTGGGTTCTTACTTGTGTGGCTTATCCCCTCTCTGATGTTGTCATTCAGACCAACATGGAGGATGAGTTAATGAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCACCATCACTGCATTTTCCAGCCTCATCACCACCACTTCCTTCCTCCAGCGCCGGCCGGTGTCGGACGTGGGCGAGCGTCTGCTCGGGCTGCAGAAGGGCGG
CAGCCGGGGCGGGCGAGTGACGGCGATGGCGAAGAAGCACAAGGTCAAGCTAATAACACCAAGTGGACAGGAAGTGTTCAACTGTCCGGATAATGAATACATTCTAGATG
GAGCTGAGATGGTAGGGATAGACCTTCCATACTCATGTAGAGCAGGAGCATGTTCTACATGTGTAGGGAAACTAAAATCAGGGAAGGTGGATCAGTCAGCTAATAGCTTC
CTTGATGATGATCAGATTGCAGATGGCTGGGTTCTTACTTGTGTGGCTTATCCCCTCTCTGATGTTGTCATTCAGACCAACATGGAGGATGAGTTAATGAAAAGTTGA
Protein sequenceShow/hide protein sequence
MASTITAFSSLITTTSFLQRRPVSDVGERLLGLQKGGSRGGRVTAMAKKHKVKLITPSGQEVFNCPDNEYILDGAEMVGIDLPYSCRAGACSTCVGKLKSGKVDQSANSF
LDDDQIADGWVLTCVAYPLSDVVIQTNMEDELMKS