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Lag0019612 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019612
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationchr5:43836478..43841369
RNA-Seq ExpressionLag0019612
SyntenyLag0019612
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3388.16Show/hide
Query:  STIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        S  Y    ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  STIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3389.47Show/hide
Query:  STIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        S  Y    ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  STIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG7030998.1 hypothetical protein SDJN02_05037 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4270.77Show/hide
Query:  MDPAREAPNEPESGRDLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDD
        MDPARE  N       LS CNFSTSKLNL R+   L  SCFSSK  +           +   ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GDD
Subjt:  MDPAREAPNEPESGRDLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDD

Query:  SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        SGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]2.5e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]1.3e-3462.22Show/hide
Query:  DPAREA----PNEPESGR--DLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR
        DP R        EPESGR   L + +F T      +   F P      + FL A     S  Y    ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR
Subjt:  DPAREA----PNEPESGR--DLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR

Query:  IHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        I GDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  IHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A0R0FX70 Cytochrome b-c1 complex subunit 63.5e-3395.59Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRIHGDDSG KHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A1S3C350 Cytochrome b-c1 complex subunit 61.2e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like6.3e-3562.22Show/hide
Query:  DPAREA----PNEPESGR--DLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR
        DP R        EPESGR   L + +F T      +   F P      + FL A     S  Y    ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR
Subjt:  DPAREA----PNEPESGR--DLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKR

Query:  IHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        I GDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  IHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 62.7e-3395.59Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 63.5e-3397.06Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRI GD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 62.6e-2573.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +DEE VD K  LE +CKPKCV+ L EYQAC KR+ GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.2e-3288.24Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 67.0e-0743.1Show/hide
Query:  LEEACKPKCVKPLLEYQACVKRIHGDDSGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK
        ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV PKLF +LK
Subjt:  LEEACKPKCVKPLLEYQACVKRIHGDDSGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial8.8e-2681.36Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRI  D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.5e-3388.24Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein4.3e-2887.93Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKC
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRI GDDSGHKHCTGQYFDYW CIDKC
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein6.3e-2781.36Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRI  D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein6.3e-2781.36Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRI  D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGGCCCGAGAAGCTCCTAATGAACCGGAAAGCGGAAGAGATTTGTCATATTGCAATTTCTCAACTTCGAAACTAAACCTAATCAGAATTGCTACTTTTCTCCC
AGATTCGTGTTTCAGCTCCAAGGTTTTCTTACCTGCTCTTTTGCTTCAAGCCAGTACTATTTACAAGCAATGTGAGGCGGATGAAGAACCTGTTGATCAGAAGAGGTATC
TTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCATGGGGATGACAGTGGTCATAAGCATTGCACTGGACAATAT
TTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAATTATTTACGAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGGCCCGAGAAGCTCCTAATGAACCGGAAAGCGGAAGAGATTTGTCATATTGCAATTTCTCAACTTCGAAACTAAACCTAATCAGAATTGCTACTTTTCTCCC
AGATTCGTGTTTCAGCTCCAAGGTTTTCTTACCTGCTCTTTTGCTTCAAGCCAGTACTATTTACAAGCAATGTGAGGCGGATGAAGAACCTGTTGATCAGAAGAGGTATC
TTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCATGGGGATGACAGTGGTCATAAGCATTGCACTGGACAATAT
TTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAATTATTTACGAAACTAAAGTAA
Protein sequenceShow/hide protein sequence
MDPAREAPNEPESGRDLSYCNFSTSKLNLIRIATFLPDSCFSSKVFLPALLLQASTIYKQCEADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIHGDDSGHKHCTGQY
FDYWSCIDKCVAPKLFTKLK