; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019666 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019666
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationchr5:44322799..44324165
RNA-Seq ExpressionLag0019666
SyntenyLag0019666
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]3.9e-1069.44Show/hide
Query:  RMRGGARNM--SGGSGRQTVRVKAGQNADSNGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKICT
        R R   RN+  SGGSGRQTVRVKA QNA SNGGPDLED  SETKPLYSLF LR +RR  T   TT IAK  T
Subjt:  RMRGGARNM--SGGSGRQTVRVKAGQNADSNGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKICT
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]2.3e-1076.56Show/hide
Query:  ARNMSGGSGRQTVRVKAGQNADS-NGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKI
        ARNM GGSGRQTVRVKAG+NA + NGGPDLED  SETKPLYSLFAL  R RT TTT+  TI KI
Subjt:  ARNMSGGSGRQTVRVKAGQNADS-NGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKI
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein1.9e-1069.44Show/hide
Query:  RMRGGARNM--SGGSGRQTVRVKAGQNADSNGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKICT
        R R   RN+  SGGSGRQTVRVKA QNA SNGGPDLED  SETKPLYSLF LR +RR  T   TT IAK  T
Subjt:  RMRGGARNM--SGGSGRQTVRVKAGQNADSNGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKICT
A0A6J1D7M5 homeobox protein HAT3.1 isoform X21.1e-1076.56Show/hide
Query:  ARNMSGGSGRQTVRVKAGQNADS-NGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKI
        ARNM GGSGRQTVRVKAG+NA + NGGPDLED  SETKPLYSLFAL  R RT TTT+  TI KI
Subjt:  ARNMSGGSGRQTVRVKAGQNADS-NGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAAGAAATGGAGCCCAGAATGAGAGGAGGCGCACGCAATATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCAGATAGTAACGG
TGGCCCAGATTTGGAGGACTCCGAGTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAGAAGAAGAAGAAGAACAACAACAACAACATCAACAACAACCATCGCCA
AAATTTGTACTCTTGTCTCTCGAAACTCCATCAACGGACACCACCAACAAGATCCAAAACCCGCCTTCTTTCACGGACAATACTTTGCTCACCAGGATTCAATGAATTTG
ATGATCAGTACCTTAGGCATTCCTTCTTTAGATGGTTCTGATCAGGTAGAAGGTGTACATCTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCAAGAAATGGAGCCCAGAATGAGAGGAGGCGCACGCAATATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCAGATAGTAACGG
TGGCCCAGATTTGGAGGACTCCGAGTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAGAAGAAGAAGAAGAACAACAACAACAACATCAACAACAACCATCGCCA
AAATTTGTACTCTTGTCTCTCGAAACTCCATCAACGGACACCACCAACAAGATCCAAAACCCGCCTTCTTTCACGGACAATACTTTGCTCACCAGGATTCAATGAATTTG
ATGATCAGTACCTTAGGCATTCCTTCTTTAGATGGTTCTGATCAGGTAGAAGGTGTACATCTTGCATAA
Protein sequenceShow/hide protein sequence
MGQEMEPRMRGGARNMSGGSGRQTVRVKAGQNADSNGGPDLEDSESETKPLYSLFALRRRRRTTTTTSTTTIAKICTLVSRNSINGHHQQDPKPAFFHGQYFAHQDSMNL
MISTLGIPSLDGSDQVEGVHLA