CuGenDBv2

Gene ID	Lag0019672
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	zinc finger SWIM domain-containing protein 7
Genome location	chr5:44374230..44376526
RNA-Seq Expression	Lag0019672
Synteny	Lag0019672
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600296.1 Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-62

93.18

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI G+PS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

KAG7030956.1 Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-62

93.18

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RS+FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

XP_008454376.1 PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]

2.6e-62

93.18

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS  VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAAS+G+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

2.0e-62

93.94

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

1.8e-63

94.7

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST VAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+C+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

1.0e-61

92.42

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS  VAEAVWKQIESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAAS+G+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

1.2e-62

93.18

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS  VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAAS+G+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

6.2e-62

92.42

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS  VAEAVWKQI+STRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKI+GEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+ IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

9.5e-63

93.94

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST  AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+CIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

8.6e-64

94.7

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAST VAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLAASLG+C+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

SwissProt top hits

e value

%identity

Alignment

Q19AV6 Zinc finger SWIM domain-containing protein 7

2.1e-11

29.31

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Query:  IESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPE-NFCACYSFFYDIVNRGEQLCCKHQLAARLAASLG
        ++ +  + D+ L  L FLFG +  +A  +VD++ +  +   PS R ++QV+G S   + Y C    ++C+C +F + ++ + + + CKH LA  L+  + 
Subjt:  IESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPE-NFCACYSFFYDIVNRGEQLCCKHQLAARLAASLG

Query:  SCIEVKVSDEELAILL
        +C ++ VSD++L  +L
Subjt:  SCIEVKVSDEELAILL

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

1.1e-47

65.91

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ +  VA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL
        KHQLAARLA+SLG+  E++VSD+ LA++LS +
Subjt:  KHQLAARLAASLGSCIEVKVSDEELAILLSNL

AT4G33925.2 unknown protein

1.7e-43

67.23

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Query:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ +  VA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGSCIEVK
        KHQLAARLA+SLG+  E++
Subjt:  KHQLAARLAASLGSCIEVK

Sequences

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CDS sequence

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ATGAGTGCGAGTACTCAGGTAGCTGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACCGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTT
CGAGCGAGCTACTCGGATTGTGGATCAAAGAGGGGTGAAGAAAATTTTTGGGGAGCCAAGCAGACGCTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGT
ATTTCTGTTTCCCAGAAAACTTTTGTGCTTGTTATTCTTTCTTCTATGACATTGTGAATAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCT
TCACTGGGGTCTTGCATTGAAGTTAAAGTGTCTGATGAAGAGCTGGCAATATTATTATCCAATCTTTAA

mRNA sequence

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Protein sequence

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MSASTQVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIFGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAA
SLGSCIEVKVSDEELAILLSNL

Lag0019672 (gene) of Sponge gourd (AG-4) v1 genome