| GenBank top hits | e value | %identity | Alignment |
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| KAA3465168.1 reverse transcriptase [Gossypium australe] | 9.6e-50 | 42.7 | Show/hide |
Query: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
+D + CL ILN ++EI INKT I LIPK +PK MS FR ISLCNVIYK+I K L N+M Q+L I+ +Q A P S + V K +R
Subjt: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
Query: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
G+ G +KLDMSKAYD VEW Y+ MK +GF W+ +M C++SVSYSV +NG + F P RGLRQ DPL+PYLFL+CAE
Subjt: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
Query: -------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ +N KS+ NVKEE LG++ +++ +YLG+P GR K F KDR K + G
Subjt: -------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| KAA3468713.1 reverse transcriptase [Gossypium australe] | 2.1e-49 | 43.51 | Show/hide |
Query: CLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSP----EDRSQIMCWWVRVYPRSKQQRIGK
CL ILN ++EI INKT I LIPK +PK MS F+ ISLCNVIYK+I K L NRM +L I+ +Q A P D I C V K ++ G+
Subjt: CLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSP----EDRSQIMCWWVRVYPRSKQQRIGK
Query: TGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE------------------
G A+KLDMSKAYDRVEW ++ MK +GF W+ +M CI+SVSYSV +NG + F PSRGLRQ DPLSPYLFLLCAE
Subjt: TGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE------------------
Query: -----------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ +N +KS+ NVKEE LG++ ++S +YLG+P GR K F KD+ K + G
Subjt: -----------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| XP_012461392.1 PREDICTED: uncharacterized protein LOC105781396 [Gossypium raimondii] | 2.7e-52 | 39.35 | Show/hide |
Query: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
+D + CL ILN EI PIN T I LIPK +P TM +FR ISLCNV+YK+I K LANR + ++ I +Q A P S + + + KQ+R
Subjt: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
Query: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
GK G++A+KLDMSKAYDRVEW IEE MK+MGF W+ +M C+SSV+YSV++NG + + F P+RGLRQ DPLSP+LFL+C E
Subjt: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
Query: ----------------------------------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAV
GQ +N +KS SKN EE + LG++R++ +YLG+P+ GR K
Subjt: ----------------------------------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAV
Query: FKRIKDRVEK
F+ +KDR++K
Subjt: FKRIKDRVEK
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| XP_028068804.1 uncharacterized protein LOC114271378 [Camellia sinensis] | 6.2e-49 | 40.32 | Show/hide |
Query: KTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLA-SSPEDRSQIMCWWVRVYPRSKQQRIGKT
+ LG+LN + + +N T I LIPK K PK MS+FR ISLCNV+YK+++K LANRM+++L IIS +Q A + S M ++ K +R GK
Subjt: KTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLA-SSPEDRSQIMCWWVRVYPRSKQQRIGKT
Query: GYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE-------------------
G+ A+KLDMSKAYDRVEW ++ M++MGF+ ++ ++ CISSVSYSVLVNG + F P+RGLRQ DPLSPYLF+LCAE
Subjt: GYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE-------------------
Query: ------------------------------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRI
GQ INLEKS SKNV + A A+G+ G+YLG+P GR+K +F +
Subjt: ------------------------------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRI
Query: KDRVEKILQG
KDRV L G
Subjt: KDRVEKILQG
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| XP_042952177.1 uncharacterized protein LOC122289261 [Carya illinoinensis] | 4.8e-49 | 44.57 | Show/hide |
Query: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLA--SSPEDRSQIMCWWVRVYPRSKQQ
E+ K L ILN EI IN+T I LIPK K+P+T+ +F+ ISLCNVIYKV++K L+NR+K +L SII+P+Q A + ++ + ++ S +
Subjt: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLA--SSPEDRSQIMCWWVRVYPRSKQQ
Query: RIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------GQTI
+ G+ GY+AIKLD+SKA+DRVEW ++ + M +MGF+ WI M C+++VSYS L+NG+ Q +F PSRG+RQ DPLSPYLF+L AE GQ +
Subjt: RIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------GQTI
Query: NLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRV
N K+ S N + T + S+ +YLG+P+ GR+K A FK I DRV
Subjt: NLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EK17 Reverse transcriptase domain-containing protein | 7.2e-51 | 41.72 | Show/hide |
Query: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPE---DRSQIMCWWVRVYPRSKQQ
D + L L + ++ +N T IALIPK +++S+FR ISLCNV+YK+I+K LANRMK +L +IS Q A PE + ++ + V Y +K+Q
Subjt: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPE---DRSQIMCWWVRVYPRSKQQ
Query: RIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE--------------
GKT ++A KLDMSKAYDRVEW Y++ M +MGF W+ +M C+S+V+YSVL+NGE +PSRGLRQ DPLSPYLFL+CAE
Subjt: RIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE--------------
Query: ----------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ +N EKS F SKN ++ LG +++ G+YLG+P GR K F+ K R+ K LQG
Subjt: ----------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| A0A2N9J6I3 Uncharacterized protein | 4.2e-51 | 42.81 | Show/hide |
Query: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRI
D + L LNN ++ +N T IALIPK K P+ M++FR ISLCNV+YK+I+K L NRMK +L ++S SQ A P S + + K +R+
Subjt: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRI
Query: GKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------------
GK +A+KLDMSKAYDRVEW Y+++ M ++GF+ W+ +M C++SVSYS+LVNGE + KPSRGLRQ DPLSPYLFL+CAE
Subjt: GKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------------
Query: ----------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ IN K+ S+N A G + +YLG+P GR+K F IKDR+ + LQG
Subjt: ----------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| A0A2N9J6K4 Reverse transcriptase domain-containing protein | 5.5e-51 | 42.65 | Show/hide |
Query: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRI
D + L LNN ++ +N T IALIPK K P+ M++FR ISLCNV+YK+I+K L NRMK +L ++S SQ A P S + + K +R+
Subjt: DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRI
Query: GKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------------
GK +A+KLDMSKAYDRVEW Y+++ M ++GF+ W+ +M C++SVSYS+LVNGE + KPSRGLRQ DPLSPYLFL+CAE
Subjt: GKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE----------------
Query: -----------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ IN K+ S+N A G + +YLG+P GR+K F IKDR+ + LQG
Subjt: -----------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| A0A5B6V7P4 Reverse transcriptase | 4.7e-50 | 42.7 | Show/hide |
Query: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
+D + CL ILN ++EI INKT I LIPK +PK MS FR ISLCNVIYK+I K L N+M Q+L I+ +Q A P S + V K +R
Subjt: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQR
Query: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
G+ G +KLDMSKAYD VEW Y+ MK +GF W+ +M C++SVSYSV +NG + F P RGLRQ DPL+PYLFL+CAE
Subjt: IGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE---------------
Query: -------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
GQ +N KS+ NVKEE LG++ +++ +YLG+P GR K F KDR K + G
Subjt: -------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| M5XK32 Reverse transcriptase domain-containing protein (Fragment) | 2.5e-51 | 41.81 | Show/hide |
Query: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSP----EDRSQIMCWWVRVYPRSK
+D + L + + + +N T + LIPK K+P+TM++ R ISLCNV+Y++ K LANRMK +++S+IS SQ A P D S + + K
Subjt: EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSP----EDRSQIMCWWVRVYPRSK
Query: QQRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE------------
Q+R G+ G +A+KLDMSKAYDRVEW ++E+ M MGF W++ VM C+++VSYS LVNGE P+RGLRQ DPLSPYLFLLCAE
Subjt: QQRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE------------
Query: -------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
G+ IN +KS S N+ +T ++ LG+ R +S YLG+P GRNK F+ +K+RV K LQG
Subjt: -------------------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 1.3e-12 | 27.44 | Show/hide |
Query: IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPR----SKQQRIGKTGYVAIKLDMSKAYDRV
I LIPK +D FR ISL N+ K++ K LANR++Q ++ +I Q+ P M W + R +V I +D KA+D++
Subjt: IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPR----SKQQRIGKTGYVAIKLDMSKAYDRV
Query: EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAEGQTINLEKSIFMASKNVKEETLAKCEVALGIKRSN
+ ++ +++ ++G +++ + + + ++++NG++ E F G RQ PLSP LF + E L ++I K +K L K EV L + +
Subjt: EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAEGQTINLEKSIFMASKNVKEETLAKCEVALGIKRSN
Query: SLGQYLGMPSQTGRN
+ YL P + +N
Subjt: SLGQYLGMPSQTGRN
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| P08548 LINE-1 reverse transcriptase homolog | 4.4e-13 | 26.39 | Show/hide |
Query: REDTMKTCLGILNNREEIEPINKTL----IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPR
+E+ + L + N E+ + T I LIPK KDP +R ISL N+ K++ K L NR++Q ++ II Q+ P + W+
Subjt: REDTMKTCLGILNNREEIEPINKTL----IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPR
Query: SKQQRIGK---TGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAEGQTINLE
+ Q I K ++ + +D KA+D ++ ++ ++K++G +++ + + S + ++++NG + + F G RQ PLSP LF + E I +
Subjt: SKQQRIGK---TGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAEGQTINLE
Query: -----KSIFMASKNVK
K I + S+ +K
Subjt: -----KSIFMASKNVK
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.0e-14 | 28.38 | Show/hide |
Query: IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQ----QRIGKTGYVAIKLDMSKAYDRV
I LIPK KDP + FR ISL N+ K++ K LANR+++ +++II P Q+ P M W + ++ ++ I LD KA+D++
Subjt: IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQ----QRIGKTGYVAIKLDMSKAYDRV
Query: EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE--GQTINLE---KSIFMASKNVKEETLAKCEVALG
+ ++ + +++ G ++ + + S ++ VNGE+ E G RQ PLSPYLF + E + I + K I + + VK LA +
Subjt: EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE--GQTINLE---KSIFMASKNVKEETLAKCEVALG
Query: IKRSNSLGQYLGMPSQTGRNKG
NS + L + + G G
Subjt: IKRSNSLGQYLGMPSQTGRNKG
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 5.9e-10 | 26.99 | Show/hide |
Query: KTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEW
+ +++L+PK D + + +R +SL + YK++ KA++ R+K +L +I P Q + P + +R +R G + LD KA+DRV+
Subjt: KTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEW
Query: VYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE
Y+ +++ F P ++ + + +S V +N RG+RQ PLS L+ L E
Subjt: VYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE
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| P16423 Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM | 2.5e-08 | 29.22 | Show/hide |
Query: IPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWVYIEES
IPK+ K +FR IS+ +V+ + + LA R+ + P Q P D V + R + ++ Y+A LD+SKA+D + I ++
Subjt: IPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWVYIEES
Query: MKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLL
++ G ++ V + S+ +G E+F P+RG++Q DPLSP LF L
Subjt: MKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLL
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