; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019715 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019715
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTubulin alpha chain
Genome locationchr5:44823436..44828722
RNA-Seq ExpressionLag0019715
SyntenyLag0019715
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576903.1 hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7493.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDERISQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
XP_022149320.1 uncharacterized protein LOC111017763 [Momordica charantia]1.1e-7293.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        DADKESNGEEPPESLFMKELKKRG+TPTSLLED+NS DFGLGGEMTGE RDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIVITVSFFFALYFF GPSFVH+  +TP+SPPPYVDPYALLEDERISQ APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
XP_022922737.1 uncharacterized protein LOC111430640 [Cucurbita moschata]3.5e-7492.41Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDER+SQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
XP_022984914.1 uncharacterized protein LOC111483048 [Cucurbita maxima]1.6e-7493.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDERISQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
XP_023552655.1 uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo]1.6e-7493.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDERISQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
TrEMBL top hitse value%identityAlignment
A0A0A0KY14 Uncharacterized protein3.9e-7190.51Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D DKE+NGEEPPESLFMKELKKRGITPTSLLEDTNS+DF LGGEMTGENRDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLI+ITVSFFF LYFFLG SF+HD  +TP+SPPPYVDPYALLEDERISQ+AP VN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
A0A1S3BY38 uncharacterized protein LOC1034948321.6e-7291.77Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        DADKESNGEEPPESLFMKELKKRGITPTSLLEDTN++DFGLGGEMTGENRDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLI+ITVSFFF LYFF G SF+HD  KTP+SPPPYVDPYALLEDERISQ+AP VN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
A0A6J1D5D9 uncharacterized protein LOC1110177635.4e-7393.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        DADKESNGEEPPESLFMKELKKRG+TPTSLLED+NS DFGLGGEMTGE RDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIVITVSFFFALYFF GPSFVH+  +TP+SPPPYVDPYALLEDERISQ APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
A0A6J1E457 uncharacterized protein LOC1114306401.7e-7492.41Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDER+SQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
A0A6J1JBV1 uncharacterized protein LOC1114830487.6e-7593.04Show/hide
Query:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
        D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT++TDFGLGGEM GENRDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL
Subjt:  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFL

Query:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        GFWPLIV+TVSFFFALYFFLGPSFVHD +KTP+SPPPYVDPYALLEDERISQ+APRVN
Subjt:  GFWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50020.1 unknown protein5.4e-4964.97Show/hide
Query:  DKESNGEEPPESLFMKELKKRGITPTSLLEDTN-STDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLG
        D +S GEEPPESLFMKELK+RG+TPTSLL+D     D    G+ TG +   S  +A +   +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLG
Subjt:  DKESNGEEPPESLFMKELKKRGITPTSLLEDTN-STDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLG

Query:  FWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN
        FWPLIV+T+  F ALY + G  F+HD S+TP+SPPPY+DPYALLEDERIS + PR+N
Subjt:  FWPLIVITVSFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAAGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCAC
TGACTTTGGACTTGGTGGCGAGATGACGGGAGAAAACAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCA
TGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGCGCTAAACTTTTGCTAACAATTGGAGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTT
TCATTCTTTTTCGCTTTATACTTCTTTCTTGGACCATCTTTTGTTCACGATGCCAGCAAAACGCCATTATCTCCACCACCATATGTGGATCCATATGCTCTTTTAGAAGA
CGAGAGAATTTCGCAAGTAGCTCCTCGTGTAAACTGA
mRNA sequenceShow/hide mRNA sequence
GATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAAGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCAC
TGACTTTGGACTTGGTGGCGAGATGACGGGAGAAAACAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCA
TGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGCGCTAAACTTTTGCTAACAATTGGAGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTT
TCATTCTTTTTCGCTTTATACTTCTTTCTTGGACCATCTTTTGTTCACGATGCCAGCAAAACGCCATTATCTCCACCACCATATGTGGATCCATATGCTCTTTTAGAAGA
CGAGAGAATTTCGCAAGTAGCTCCTCGTGTAAACTGA
Protein sequenceShow/hide protein sequence
DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTDFGLGGEMTGENRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITV
SFFFALYFFLGPSFVHDASKTPLSPPPYVDPYALLEDERISQVAPRVN