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Lag0019756 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019756
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:45159648..45160067
RNA-Seq ExpressionLag0019756
SyntenyLag0019756
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.6e-0436.61Show/hide
Query:  MRDSSSSTICMGSRRVEGNRSIKMLEMRAILEGLRSLPSVRASRPDLHIPTIEVVSDVVGVINLLNHEEADFSEISFLVAEIERLSSSLKEISFFYCPRW
        +R      +  G+R VE   ++K+LE  AILEGLR+L ++   RP LHI T     D   V +LLN +  D ++  ++V EI  L  S + ++F    R 
Subjt:  MRDSSSSTICMGSRRVEGNRSIKMLEMRAILEGLRSLPSVRASRPDLHIPTIEVVSDVVGVINLLNHEEADFSEISFLVAEIERLSSSLKEISFFYCPRW

Query:  QNSEAHVLARAA
         N  AH LA+ A
Subjt:  QNSEAHVLARAA
TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224031.2e-0436.61Show/hide
Query:  MRDSSSSTICMGSRRVEGNRSIKMLEMRAILEGLRSLPSVRASRPDLHIPTIEVVSDVVGVINLLNHEEADFSEISFLVAEIERLSSSLKEISFFYCPRW
        +R      +  G+R VE   ++K+LE  AILEGLR+L ++   RP LHI T     D   V +LLN +  D ++  ++V EI  L  S + ++F    R 
Subjt:  MRDSSSSTICMGSRRVEGNRSIKMLEMRAILEGLRSLPSVRASRPDLHIPTIEVVSDVVGVINLLNHEEADFSEISFLVAEIERLSSSLKEISFFYCPRW

Query:  QNSEAHVLARAA
         N  AH LA+ A
Subjt:  QNSEAHVLARAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGACTCTTCCAGTTCTACAATCTGTATGGGTTCGAGAAGAGTTGAAGGAAATCGGTCAATTAAGATGCTGGAGATGAGAGCCATCCTTGAAGGGCTGAGAAGCTT
ACCGTCCGTCAGAGCTTCCCGTCCAGATCTCCACATTCCGACCATTGAGGTCGTTTCAGATGTCGTGGGCGTGATCAATCTGCTCAACCATGAAGAAGCAGATTTTTCGG
AGATTTCTTTTCTTGTTGCTGAGATCGAGCGCTTGTCCTCTAGCCTCAAAGAAATCTCCTTCTTCTATTGCCCTCGTTGGCAAAACTCCGAAGCGCACGTTTTGGCACGA
GCTGCAGTCTATGGCGCGTTTGCCTGTTCTTCTCGTTTTTTGGAAGCTTCTTCCTTGTTGGAAGAAGGGTGTTTTTTTTGTGTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGACTCTTCCAGTTCTACAATCTGTATGGGTTCGAGAAGAGTTGAAGGAAATCGGTCAATTAAGATGCTGGAGATGAGAGCCATCCTTGAAGGGCTGAGAAGCTT
ACCGTCCGTCAGAGCTTCCCGTCCAGATCTCCACATTCCGACCATTGAGGTCGTTTCAGATGTCGTGGGCGTGATCAATCTGCTCAACCATGAAGAAGCAGATTTTTCGG
AGATTTCTTTTCTTGTTGCTGAGATCGAGCGCTTGTCCTCTAGCCTCAAAGAAATCTCCTTCTTCTATTGCCCTCGTTGGCAAAACTCCGAAGCGCACGTTTTGGCACGA
GCTGCAGTCTATGGCGCGTTTGCCTGTTCTTCTCGTTTTTTGGAAGCTTCTTCCTTGTTGGAAGAAGGGTGTTTTTTTTGTGTTGGGTGA
Protein sequenceShow/hide protein sequence
MRDSSSSTICMGSRRVEGNRSIKMLEMRAILEGLRSLPSVRASRPDLHIPTIEVVSDVVGVINLLNHEEADFSEISFLVAEIERLSSSLKEISFFYCPRWQNSEAHVLAR
AAVYGAFACSSRFLEASSLLEEGCFFCVG