CuGenDBv2

Gene ID	Lag0019765
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	classical arabinogalactan protein 4
Genome location	chr5:45216967..45217536
RNA-Seq Expression	Lag0019765
Synteny	Lag0019765
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6576849.1 hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-43

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA
        MASFAVLN +T ALLL SAAANSPLPSPAP P+SP WKW P  E PSSPP  E P        SP V+PP  SPVPSSD PTSPP ANPP +SPAA PPA
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA

Query:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
         KSP  APSPSK K PAPAPSKMSP PA+APKSSA P  SPP+PNG MEP  P+PS AP  PK  NGG ANRFA+ G VA GLMA ALIA
Subjt:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-44

70.53

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA
        MASFAVLN +T ALLL SAAANSPLPSPAP P+SP WKW P  E PSSPP  E P        SP V+PP  SPVPSSD PTSPP ANPP +SPAA PPA
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA

Query:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
         KSP  APSPSK K PAPAPSKMSP PA+APKSSA P  SPP+PNG MEP  P+PS AP  PK  NGG ANRFA+GG VA GLMA ALIA
Subjt:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

6.5e-43

68.72

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA
        MAS  +LN LT+A LL SAAANSP PSPAP  +SP WKW PT +PPSSPP AE P     PP   PT SPP TPP  SPVPSS +PTSPP ANPP +SP 
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA

Query:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
        APPPA  SPS APSP+K K PAPAPSK+SP PAKAPKSS AP  SPPSPNG MEP  P+PSEAPA  KEGNG GANRFA+GG +A G M  A IA
Subjt:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

XP_022922559.1 extensin-like [Cucurbita moschata]

8.5e-43

69.47

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA
        MASFAVLN +T ALLL SA+ANSPLPSPAP P+SP WKW P  + PSSPP  E P        SP V+PP  SPVPSSD PTSPP ANPP +SPAA PPA
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA

Query:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
         KSP  APSPSK K PAPAPSKMS  PA+APKSSAAP  SPP+PNG MEP  P+PS AP  PK  NGG ANRFA+GG VA GLMA ALIA
Subjt:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

1.5e-44

71.88

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQP--PTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPP
        MAS  VL  LTVALLL SAAANSP+PSPAPGP+SP WKW P+ EPPSSPPMAE P    P  PT SPP TPP  SP+PSS APT PP ANPP +SP A P
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQP--PTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPP

Query:  PAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
        P  KSPS APSP+K K PAPAPSKMSP PAKAPKSS AP  SPPSPNG MEP  P+PS APA  K+ NGG ANRFA+GG VAVGLM  ALIA
Subjt:  PAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

6.6e-41

68.72

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA
        MAS  +LN LT+A LL S AANSP PSPAP  +SP WKW P+ EPPSSPP AE P     PP   PT SPP TPP  SPVP+S APTSPP ANPP +SP 
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA

Query:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
        APPPA KSPS APSP+K K PAPAPSK SP PAKAPKSS AP  SPPSPNG MEP  P+PS APA  KEGNG GANRFA+GG +A GLM  A IA
Subjt:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

A0A1S3CHW9 classical arabinogalactan protein 4

3.1e-43

68.72

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA
        MAS  +LN LT+A LL SAAANSP PSPAP  +SP WKW PT +PPSSPP AE P     PP   PT SPP TPP  SPVPSS +PTSPP ANPP +SP 
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA

Query:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
        APPPA  SPS APSP+K K PAPAPSK+SP PAKAPKSS AP  SPPSPNG MEP  P+PSEAPA  KEGNG GANRFA+GG +A G M  A IA
Subjt:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

A0A5A7V3Q7 Classical arabinogalactan protein 4

3.1e-43

68.72

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA
        MAS  +LN LT+A LL SAAANSP PSPAP  +SP WKW PT +PPSSPP AE P     PP   PT SPP TPP  SPVPSS +PTSPP ANPP +SP 
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAP-----PPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPA

Query:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
        APPPA  SPS APSP+K K PAPAPSK+SP PAKAPKSS AP  SPPSPNG MEP  P+PSEAPA  KEGNG GANRFA+GG +A G M  A IA
Subjt:  APPPAEKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

A0A6J1E3R0 extensin-like

4.1e-43

69.47

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA
        MASFAVLN +T ALLL SA+ANSPLPSPAP P+SP WKW P  + PSSPP  E P        SP V+PP  SPVPSSD PTSPP ANPP +SPAA PPA
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA

Query:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
         KSP  APSPSK K PAPAPSKMS  PA+APKSSAAP  SPP+PNG MEP  P+PS AP  PK  NGG ANRFA+GG VA GLMA ALIA
Subjt:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

A0A6J1JCM0 extensin-like

4.3e-40

67.89

Show/hide

Query:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA
        MASFAVLN +T ALLL SA+ANSPLPS AP P+S  WKW P  E PSSPP  E P        SP V+PP  SPVPSSD PTSP  ANPP +SPAA PPA
Subjt:  MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPA

Query:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA
         KSP  APSPSK K PAPAPSKMSP PA+APKSSAAP  SPP+PNG MEP  P+PS AP  PK  NGG ANRFA+   VA GLMA ALIA
Subjt:  EKSPSDAPSPSKMKPPAPAPSKMSPPPAKAPKSSAAP-GSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

SwissProt top hits

e value

%identity

Alignment

Q9FPQ6 Vegetative cell wall protein gp1

1.2e-04

45.33

Show/hide

Query:  SAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPAEKSPSDAPSPSKMKPPA
        S A  SP P P+PGP SP     P+  PPS  P + APP   PP+ +PP +P  PSP P S AP SPP   PP  SP APP    SPS  PSP+   PP+
Subjt:  SAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPAEKSPSDAPSPSKMKPPA

Query:  PAPSKMSPPPAKAPKSSAAPG------SPPSPNGGMEPPSPSPSEAPAVP
        PAP   SPP   +P     P       +PPSP+  + P    PS AP VP
Subjt:  PAPSKMSPPPAKAPKSSAAPG------SPPSPNGGMEPPSPSPSEAPAVP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTTCGCCGTCCTGAATGCTCTCACGGTGGCGCTACTGCTGACCTCCGCCGCCGCCAACTCACCGCTGCCGTCTCCGGCGCCGGGCCCCGACTCACCGCAGTG
GAAATGGATTCCCACTGCCGAGCCGCCGTCCTCTCCACCAATGGCAGAGGCACCGCCGCCGCAGCAGCCGCCCACTGGGTCTCCGCCGGTCACCCCACCAGTGCCGAGCC
CCGTTCCGTCATCGGACGCACCAACTTCGCCGCCGCCAGCAAACCCACCAATGATGTCGCCGGCCGCTCCGCCGCCGGCGGAGAAGAGTCCCAGTGATGCACCGTCGCCG
TCGAAAATGAAACCACCAGCTCCGGCTCCGTCGAAAATGAGTCCGCCGCCAGCCAAGGCGCCGAAATCTTCTGCAGCTCCGGGGAGTCCTCCGTCACCAAATGGAGGGAT
GGAGCCGCCGTCGCCGTCGCCGTCCGAAGCTCCGGCGGTGCCGAAGGAGGGCAACGGCGGCGGGGCAAACAGATTCGCCGTTGGTGGGTATGTTGCAGTTGGATTAATGG
CTGTGGCTTTGATCGCCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASFAVLNALTVALLLTSAAANSPLPSPAPGPDSPQWKWIPTAEPPSSPPMAEAPPPQQPPTGSPPVTPPVPSPVPSSDAPTSPPPANPPMMSPAAPPPAEKSPSDAPSP
SKMKPPAPAPSKMSPPPAKAPKSSAAPGSPPSPNGGMEPPSPSPSEAPAVPKEGNGGGANRFAVGGYVAVGLMAVALIA

Lag0019765 (gene) of Sponge gourd (AG-4) v1 genome