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Lag0019766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:45222112..45222883
RNA-Seq ExpressionLag0019766
SyntenyLag0019766
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021716820.1 uncharacterized protein LOC110684687 [Chenopodium quinoa]2.8e-1830.27Show/hide
Query:  IRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFH
        + D+E    ++    G +H      W+PP  G +K+NSDA++        GG V+R+  GEV+++ C  L S + VD AEA AL   +  A +  F +  
Subjt:  IRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFH

Query:  VETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSEFS
        +ETD +++ + L +     + +G+++N +  L     SC  +F  R GN  AH +  L+ +Y D  +W+EE P E S  + ++ +
Subjt:  VETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSEFS

XP_021735105.1 uncharacterized protein LOC110701784 [Chenopodium quinoa]3.0e-2030.73Show/hide
Query:  WAVKERLSIRDFELVGPSVGLVAGHQHCAAV-----------CAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEA
        WA  +R  +   +++  +VG+V   +H   V           C W+PP  G +K+NSDA+V    G    G V+R+  G+V+ S C  +  C++VD  EA
Subjt:  WAVKERLSIRDFELVGPSVGLVAGHQHCAAV-----------CAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEA

Query:  WALLR-GIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI
         A++R  +  A + GF    +ETD L+L N L + +   +  GV++N +  L     SC  +F  R GN VAH +   +  +  F +W+E++PP+ ++ +
Subjt:  WALLR-GIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI

Query:  CSEFS
         ++ S
Subjt:  CSEFS

XP_021739472.1 uncharacterized protein LOC110705848 [Chenopodium quinoa]1.4e-1731.87Show/hide
Query:  CAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMG
        C W+ P +G +K+NSDA++       G G V+R+  G+V+ + C  +   ++VD  EA A+   +  A + GF R  +ETD+++L   L+++ ED++  G
Subjt:  CAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMG

Query:  VMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSE
        ++   +  L      C  AF  R GN VAH +  L+  +    +WLEE+P E  +V+ ++
Subjt:  VMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSE

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]2.8e-1832.97Show/hide
Query:  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIET
        V WA K  +  R+     P  G V       A   W PP+    K+N+DAS       AG G+++RN RG+V+ SA   L +  +VD AEA   + G++ 
Subjt:  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIET

Query:  AHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPE
        A ++G     +ETDS R+ N  ++  ED+SE G ++ + ++           F  R+GN  AH++   A    +F IW+E+WP E
Subjt:  AHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.1e-2241.51Show/hide
Query:  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEM
        V  WRPP    LK+N DA+ R     AG GV++R+  G V L+A  +L    +VD+ E +A+  GI  A + GF RF +ETDSLR+ N L     D SE+
Subjt:  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEM

Query:  GVMMNRVRDLL-LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI
        GV+ + ++  L  H      +FT R GN  AH++  LA T     IW+EEWP E S V+
Subjt:  GVMMNRVRDLL-LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI

TrEMBL top hitse value%identityAlignment
A0A5C7IPG1 RNase H domain-containing protein6.4e-1631.06Show/hide
Query:  CAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDV
        C  V  WRPP+ G  K+N+DA++       G  V++R+ RG V+ S+   + + ++    EA A+LR +  A   G     +E+D+  + NF++      
Subjt:  CAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDV

Query:  SEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTY-ADFIWLEEWPPEASDVI
        SE+G+ +  +R  L       ++FTPR  N+ AH +V L  ++  D  W+EE PP    V+
Subjt:  SEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTY-ADFIWLEEWPPEASDVI

A0A6J1C467 uncharacterized protein LOC1110077752.2e-1631.31Show/hide
Query:  VVSVLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRG
        +V+++  V + L +      GPS+ L+   +    V AW PP     K+N DA+ + G  +AG  +++R+    VLLSA   +    +V  AE  A   G
Subjt:  VVSVLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRG

Query:  IETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLL--LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSE
        +  A + G   F +ETDS ++ N L    ED SE+GV+ + +R ++  LH      +F  R+GN  AH +  +      F +W+EEW  + S+VI ++
Subjt:  IETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLL--LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSE

A0A6J1CIF1 uncharacterized protein LOC1110112371.4e-1832.97Show/hide
Query:  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIET
        V WA K  +  R+     P  G V       A   W PP+    K+N+DAS       AG G+++RN RG+V+ SA   L +  +VD AEA   + G++ 
Subjt:  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIET

Query:  AHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPE
        A ++G     +ETDS R+ N  ++  ED+SE G ++ + ++           F  R+GN  AH++   A    +F IW+E+WP E
Subjt:  AHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPE

A0A6J1DBJ7 uncharacterized protein LOC1110189735.4e-2341.51Show/hide
Query:  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEM
        V  WRPP    LK+N DA+ R     AG GV++R+  G V L+A  +L    +VD+ E +A+  GI  A + GF RF +ETDSLR+ N L     D SE+
Subjt:  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEM

Query:  GVMMNRVRDLL-LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI
        GV+ + ++  L  H      +FT R GN  AH++  LA T     IW+EEWP E S V+
Subjt:  GVMMNRVRDLL-LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI

A0A803MB59 Uncharacterized protein4.9e-1631.87Show/hide
Query:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM
        W+PP+ G +K+NSDA++  G  T G G ++R+  G+V+ S C  L   ++VD AEA AL   +  +  +GF +  +ETD L+L + L++     + +G++
Subjt:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM

Query:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSEFS
        +N +  L     SC  +F  R GN VAH +  L+ ++ +  + +EE P   S  + ++ +
Subjt:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSEFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-0627.14Show/hide
Query:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM
        WRPP    +K N+DA+        G G VLRN +GEV       LP   +V  AE  A+   + +  +  +     E+DS  L   LN   E    +   
Subjt:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM

Query:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF
        +  ++ LL   +  +  F PR+GN +A  +   + ++ ++
Subjt:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF

AT5G61090.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-0421.62Show/hide
Query:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM
        W PP    +KLN   +  P         ++R+  G+ +        S   V  A   A+ +G++     GF R H+ET S  + N L  K     +   +
Subjt:  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVM

Query:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADFIWLEEWPP
        +   +D++L +  C +    ++ N  A  +   +      +   E+PP
Subjt:  MNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADFIWLEEWPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGGGCTCGAAGTTTGCTTCTTTAGATCTCTCTAATGTAGGGCCTGATGTGGTTTCTGTGTTGTGGGCTGTTAAGGAGAGGTTGAGTATTCGGGATTTTGAGCT
GGTTGGGCCGTCGGTGGGGTTGGTTGCGGGCCATCAGCACTGTGCTGCTGTGTGTGCATGGAGGCCGCCGGAGGATGGTGATCTGAAACTGAACTCTGATGCGTCGGTGA
GACCGGGGTGTGGCACGGCTGGGGGCGGCGTAGTCCTGAGAAATGGGAGGGGTGAGGTGCTGTTGTCGGCTTGTTTCGTTTTGCCAAGTTGTTGGAATGTTGATTTCGCT
GAGGCATGGGCTTTGTTAAGGGGCATTGAGACTGCACATCAAATGGGTTTCTTTCGGTTCCATGTAGAGACTGACTCTCTAAGGTTAGCAAATTTTTTAAATGAGAAGGT
GGAGGATGTGTCGGAGATGGGAGTAATGATGAATAGGGTACGTGATCTCCTTCTCCATGATTCTTCCTGCAGAGTTGCCTTCACGCCTAGGAAAGGAAACATGGTTGCTC
ATATAATGGTGTCTTTAGCTTTCACTTATGCGGATTTTATTTGGCTTGAAGAATGGCCTCCTGAGGCCTCTGATGTAATTTGTTCTGAGTTTTCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGGGCTCGAAGTTTGCTTCTTTAGATCTCTCTAATGTAGGGCCTGATGTGGTTTCTGTGTTGTGGGCTGTTAAGGAGAGGTTGAGTATTCGGGATTTTGAGCT
GGTTGGGCCGTCGGTGGGGTTGGTTGCGGGCCATCAGCACTGTGCTGCTGTGTGTGCATGGAGGCCGCCGGAGGATGGTGATCTGAAACTGAACTCTGATGCGTCGGTGA
GACCGGGGTGTGGCACGGCTGGGGGCGGCGTAGTCCTGAGAAATGGGAGGGGTGAGGTGCTGTTGTCGGCTTGTTTCGTTTTGCCAAGTTGTTGGAATGTTGATTTCGCT
GAGGCATGGGCTTTGTTAAGGGGCATTGAGACTGCACATCAAATGGGTTTCTTTCGGTTCCATGTAGAGACTGACTCTCTAAGGTTAGCAAATTTTTTAAATGAGAAGGT
GGAGGATGTGTCGGAGATGGGAGTAATGATGAATAGGGTACGTGATCTCCTTCTCCATGATTCTTCCTGCAGAGTTGCCTTCACGCCTAGGAAAGGAAACATGGTTGCTC
ATATAATGGTGTCTTTAGCTTTCACTTATGCGGATTTTATTTGGCTTGAAGAATGGCCTCCTGAGGCCTCTGATGTAATTTGTTCTGAGTTTTCTCCTTAA
Protein sequenceShow/hide protein sequence
MWLGSKFASLDLSNVGPDVVSVLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFA
EAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADFIWLEEWPPEASDVICSEFSP