; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019772 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019772
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:45284082..45285327
RNA-Seq ExpressionLag0019772
SyntenyLag0019772
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0602173.1 hypothetical protein [Gossypium raimondii]1.8e-0546.67Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY
        +V DLL+ GG+ W    L   L   DV  V  +PIS + PSDQ++WHFS    Y  KSGY
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY

OMO64639.1 reverse transcriptase [Corchorus capsularis]3.3e-0725Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASG----------IFRV
        +V D+++    +WR   L   +  EDVS +L +PI ++   D ++W  S+S  +S KS Y   + +      +  E  + + R  G          I+R+
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASG----------IFRV

Query:  SRNKL---------GKDVAGY----GKRGWRGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMW---FDAAWLKDTLATGLGRSF
          N L         G D+       G      G       +  +      QL + +  A +     ++ + +  GP M     DA++ +DT   GLG  F
Subjt:  SRNKL---------GKDVAGY----GKRGWRGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMW---FDAAWLKDTLATGLGRSF

Query:  KGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEP---IYECIWQLMDDFQSCIFIFVRESS
        +   G+V     +      + L+ E  A+ +G + A E  I   I +SD L  V+I+N    SPV++E    IYE I +L+  F  C F+  R  +
Subjt:  KGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEP---IYECIWQLMDDFQSCIFIFVRESS

XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]1.1e-0524.82Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASGIFRVSRNKLGK--D
        +V DL++E    W+   L       +V  V+ +PIS  +PSD + W      ++S KS Y              + EG     A  + + ++  +G+  D
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASGIFRVSRNKLGK--D

Query:  VAGYGKRGW--RGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMWFDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSL
               GW    GG  LP VW  + A  F      K N + G   E                      LA GLG   +   G V     +   +S    
Subjt:  VAGYGKRGW--RGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMWFDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSL

Query:  HEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYECIWQLMDDFQSCIFIFVRESSMRELMCW
          E KA+ WGL  A  LG+++L+V+SD LQ++  + +K         I + I  L   F + I+ +V+    +    W
Subjt:  HEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYECIWQLMDDFQSCIFIFVRESSMRELMCW

XP_023919013.1 uncharacterized protein LOC112030568 [Quercus suber]1.2e-0624.19Show/hide
Query:  WQ-QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASGIFRVSRNKLG-
        W+ +V DL++    +W   R+ +     DV+ +L +P+S+ V  D + W F+ +  Y+ KSGY   K L L  N  G E        S   ++ + K G 
Subjt:  WQ-QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASGIFRVSRNKLG-

Query:  -KDV-AGYGKRGWRGG------GTMLPSVWLMEDASEFS-------QLAREKSNANVG---------------LSAEQHSARE---------MEGPTMW-
         +DV AG   R  + G      G ++ S+ L     EF        Q+  ++++   G                 +E H A+E         +     W 
Subjt:  -KDV-AGYGKRGWRGG------GTMLPSVWLMEDASEFS-------QLAREKSNANVG---------------LSAEQHSARE---------MEGPTMW-

Query:  ----------FDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYE
                  FD A   +   +G G   +  NG+V    S  GG+  +S   E  A    L+ A + G  E+I++ D  +++  V   +        IYE
Subjt:  ----------FDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYE

Query:  CIWQLMDDFQSCIFIFVRESSMRELMCWPRMAFIANSST
         IW L+  F+S     VR S+        R A ++++ T
Subjt:  CIWQLMDDFQSCIFIFVRESSMRELMCWPRMAFIANSST

XP_027158150.1 uncharacterized protein LOC113759774 [Coffea eugenioides]1.6e-0926.46Show/hide
Query:  QQVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTK-SLPLVLNQVGLEEGRPYGRASGIFRVSRNKLGKD
        Q V +L++E   KW ++ +       + S ++ +P+S     D + W +S S  YS KSGY   K  +     +V   EG  Y + S   +  RN++   
Subjt:  QQVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTK-SLPLVLNQVGLEEGRPYGRASGIFRVSRNKLGKD

Query:  VAGYGKRGWRG--------GGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMWFDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGG
           +G+R   G        GGT +    L     +  Q A+ ++     L   Q    ++    +  DAA        GLG   +  +G++ E R     
Subjt:  VAGYGKRGWRG--------GGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMWFDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGG

Query:  SSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYECIWQLMDDFQSCIFIFVRESSMRELMCWPRMAFIA
        S   +  EE  A+  GL  AKE G +E+ V+SD   ++  ++ K +       I E I QL   FQ C F+F+     R   C  +MA  A
Subjt:  SSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYECIWQLMDDFQSCIFIFVRESSMRELMCWPRMAFIA

TrEMBL top hitse value%identityAlignment
A0A1R3H2S5 Reverse transcriptase1.6e-0725Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASG----------IFRV
        +V D+++    +WR   L   +  EDVS +L +PI ++   D ++W  S+S  +S KS Y   + +      +  E  + + R  G          I+R+
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYGRASG----------IFRV

Query:  SRNKL---------GKDVAGY----GKRGWRGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMW---FDAAWLKDTLATGLGRSF
          N L         G D+       G      G       +  +      QL + +  A +     ++ + +  GP M     DA++ +DT   GLG  F
Subjt:  SRNKL---------GKDVAGY----GKRGWRGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMW---FDAAWLKDTLATGLGRSF

Query:  KGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEP---IYECIWQLMDDFQSCIFIFVRESS
        +   G+V     +      + L+ E  A+ +G + A E  I   I +SD L  V+I+N    SPV++E    IYE I +L+  F  C F+  R  +
Subjt:  KGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEP---IYECIWQLMDDFQSCIFIFVRESS

A0A5D2HUW3 Uncharacterized protein5.7e-0545Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY
        +V DLL+  G+ W    L   L   DV  V  +PIS + PSDQ++WHFS    Y  KSGY
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY

A0A6P9EU14 uncharacterized protein LOC1183497121.1e-0522.55Show/hide
Query:  VEYMVRPMNPKAKLERGGWQQVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRP
        V+  ++ +NP AK        V +L+EE   +W+E  + +    E+  ++ A+P+S+   +D+++W  S + ++S KS Y        V  +  +E G  
Subjt:  VEYMVRPMNPKAKLERGGWQQVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRP

Query:  YGRASGIFRVSRNKLGKDVAGYGKR-GWRGG-----------------GTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPT-MW----F
        + +      + +     DV G  K   WR G                 GT+   V L     +   +A +    N   +AE       + P   W    F
Subjt:  YGRASGIFRVSRNKLGKDVAGYGKR-GWRGG-----------------GTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPT-MW----F

Query:  DAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVN
        D A   +    G+G   +   G+V        GS  +    E  AL+  +D   ELG+Q++I++ D  ++++ +N
Subjt:  DAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSSLNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVN

A0A7J8QLI2 Uncharacterized protein8.7e-0646.67Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY
        +V DLL+ GG+ W    L   L   DV  V  +PIS + PSDQ++WHFS    Y  KSGY
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY

A0A7J9CSX4 Uncharacterized protein7.4e-0543.33Show/hide
Query:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY
        +V DLL+  G+ W    L   L   DV  V  +PIS + PSD+++WHFS    Y  KSGY
Subjt:  QVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGTTGGGACAGAGACGAGGTTGAATATATGGTCAGACCCATGAATCCCAAGGCCAAGTTAGAAAGAGGTGGGTGGCAACAGGTCAAGGACTTGTTGGAGGAAGG
CGGGCTGAAGTGGAGGGAGAAACGACTTCGATCATGTCTGTGTCTCGAGGATGTGAGTTTAGTTCTTGCCATGCCAATCAGCAAAATGGTGCCATCTGACCAGGTGGTGT
GGCACTTCTCGAATTCCGACGAATATTCGGAAAAGTCCGGTTATCGGACGACCAAAAGCTTGCCATTGGTGCTGAATCAAGTGGGGCTGGAGGAAGGGAGGCCGTATGGA
AGGGCATCTGGAATCTTCCGTGTGTCCAGAAATAAGTTGGGAAAGGATGTGGCGGGATATGGGAAGAGGGGGTGGCGAGGAGGAGGCACTATGCTTCCTAGCGTTTGGCT
TATGGAGGATGCAAGTGAGTTTAGTCAGTTGGCAAGGGAAAAGTCCAATGCTAATGTAGGGTTGAGCGCGGAGCAACATTCTGCAAGGGAAATGGAGGGGCCGACTATGT
GGTTTGACGCTGCATGGTTGAAGGATACGCTTGCTACGGGTTTGGGACGGTCTTTTAAAGGGCCAAATGGTGATGTTTGGGAAGAAAGGTCAAAGTTTGGTGGGAGTAGT
TTGAATAGCTTGCATGAAGAGGACAAAGCCTTGTTCTGGGGACTAGACTGCGCCAAGGAGTTGGGAATTCAAGAGTTGATAGTGAAATCTGATGTCTTGCAGATGGTGAA
TATTGTCAATGACAAGGAAAAAAGCCCGGTTTATTTCGAACCAATCTATGAATGTATTTGGCAATTAATGGATGATTTTCAATCTTGCATTTTCATTTTTGTGAGAGAGA
GTTCAATGAGAGAGCTCATGTGTTGGCCAAGAATGGCCTTTATAGCTAATTCAAGCACCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGTTGGGACAGAGACGAGGTTGAATATATGGTCAGACCCATGAATCCCAAGGCCAAGTTAGAAAGAGGTGGGTGGCAACAGGTCAAGGACTTGTTGGAGGAAGG
CGGGCTGAAGTGGAGGGAGAAACGACTTCGATCATGTCTGTGTCTCGAGGATGTGAGTTTAGTTCTTGCCATGCCAATCAGCAAAATGGTGCCATCTGACCAGGTGGTGT
GGCACTTCTCGAATTCCGACGAATATTCGGAAAAGTCCGGTTATCGGACGACCAAAAGCTTGCCATTGGTGCTGAATCAAGTGGGGCTGGAGGAAGGGAGGCCGTATGGA
AGGGCATCTGGAATCTTCCGTGTGTCCAGAAATAAGTTGGGAAAGGATGTGGCGGGATATGGGAAGAGGGGGTGGCGAGGAGGAGGCACTATGCTTCCTAGCGTTTGGCT
TATGGAGGATGCAAGTGAGTTTAGTCAGTTGGCAAGGGAAAAGTCCAATGCTAATGTAGGGTTGAGCGCGGAGCAACATTCTGCAAGGGAAATGGAGGGGCCGACTATGT
GGTTTGACGCTGCATGGTTGAAGGATACGCTTGCTACGGGTTTGGGACGGTCTTTTAAAGGGCCAAATGGTGATGTTTGGGAAGAAAGGTCAAAGTTTGGTGGGAGTAGT
TTGAATAGCTTGCATGAAGAGGACAAAGCCTTGTTCTGGGGACTAGACTGCGCCAAGGAGTTGGGAATTCAAGAGTTGATAGTGAAATCTGATGTCTTGCAGATGGTGAA
TATTGTCAATGACAAGGAAAAAAGCCCGGTTTATTTCGAACCAATCTATGAATGTATTTGGCAATTAATGGATGATTTTCAATCTTGCATTTTCATTTTTGTGAGAGAGA
GTTCAATGAGAGAGCTCATGTGTTGGCCAAGAATGGCCTTTATAGCTAATTCAAGCACCGAATAA
Protein sequenceShow/hide protein sequence
MACWDRDEVEYMVRPMNPKAKLERGGWQQVKDLLEEGGLKWREKRLRSCLCLEDVSLVLAMPISKMVPSDQVVWHFSNSDEYSEKSGYRTTKSLPLVLNQVGLEEGRPYG
RASGIFRVSRNKLGKDVAGYGKRGWRGGGTMLPSVWLMEDASEFSQLAREKSNANVGLSAEQHSAREMEGPTMWFDAAWLKDTLATGLGRSFKGPNGDVWEERSKFGGSS
LNSLHEEDKALFWGLDCAKELGIQELIVKSDVLQMVNIVNDKEKSPVYFEPIYECIWQLMDDFQSCIFIFVRESSMRELMCWPRMAFIANSSTE