; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019776 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019776
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr5:45351311..45352816
RNA-Seq ExpressionLag0019776
SyntenyLag0019776
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN77126.1 hypothetical protein VITISV_013628 [Vitis vinifera]7.4e-2834.56Show/hide
Query:  TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE---------------------------SQYLAQIKDVADKFSAIGE
        T   P  L +   N+ P+PI       +   +P PAKF+DD QLQ NP F+ WE                           S+YLA+IK+V DK+SA+GE
Subjt:  TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE---------------------------SQYLAQIKDVADKFSAIGE

Query:  PISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLPSF--RPSNPTLELPSIHPIF
        P+SYRD L + L+GL  EY+ FVT+I NR+D  SL++V SLL  Y   LE++ T +QL  +Q NL+    +   H +  P+F   P N     P+  PI 
Subjt:  PISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLPSF--RPSNPTLELPSIHPIF

Query:  LCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP
        L        +P     P+   Q+S   + +     F  +       KFGH AL C+HR NL YQ   P        N QP    P+ +  M   S  P
Subjt:  LCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP

XP_022148871.1 uncharacterized protein LOC111017438 [Momordica charantia]8.7e-2941.06Show/hide
Query:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSC
        SQYLA+IK++  K S+IGEPIS +DH+++I++GLG EYN FVT+IQNR+D  +LEDVR+LLL Y+ RLEKQ +V+QLN+ QAN++ L       H  N  
Subjt:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSC

Query:  LPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQ-------TPPPQALLTTAH
        +PS     P                N   +P     P Q S P +P    S    +      +K GHT   C+HR NL Y+        P P AL    H
Subjt:  LPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQ-------TPPPQALLTTAH

Query:  NVQPSSA
        +V  SS+
Subjt:  NVQPSSA

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]6.4e-4053Show/hide
Query:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP
        SQYLA+IK++ADKF+A+GEP+SYRDHLAH+LDGLGSEYN FVT+I NR D+PSLEDVRSLLL YEARL+KQ TV+QLN+AQANL  L + HNS  P  + 
Subjt:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP

Query:  SNPTLELPSI--HPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDS
        S P     S    PI      + L +P         SV  +P    S  I+        K GH+A +C+HRTN+AY    PQAL    H+VQPS   P S
Subjt:  SNPTLELPSI--HPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDS

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]2.4e-2654.81Show/hide
Query:  QLQPNPEFLLWESQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLH
        QLQ   +  L  SQYLAQIKDV D F+AIGEP+SYRDHL++IL+GLGSEYNPFV++I NRT+ PS+ DVR+LL+ Y++RLEKQT  + L L QAN++ L 
Subjt:  QLQPNPEFLLWESQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLH

Query:  I-----------HNSCLPSFRPSNPTL-ELPSIHP
        I           HN    S R S P++   PSI P
Subjt:  I-----------HNSCLPSFRPSNPTL-ELPSIHP

XP_038891713.1 uncharacterized protein LOC120081111 [Benincasa hispida]1.4e-3446.98Show/hide
Query:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP
        SQYL+QIKDVADKFS +GE ISYRDHL HILDGLGSEYN FVT+IQN  DN S+EDV SLLL YEA+LEKQ  ++ LN+AQA LS+L   HNS   + RP
Subjt:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP

Query:  ----SNPTLELPSIHPIFLCFHLNQLH-RPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLW-KFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSA
            S+  L  P+  PI L    N +H RP F+K    +  P+             P   ++ KFGH    CH   + AYQ   PQA +++     P+S 
Subjt:  ----SNPTLELPSIHPIFLCFHLNQLH-RPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLW-KFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSA

Query:  IPDSLTTMSVDSFHP
        I   + ++++D  +P
Subjt:  IPDSLTTMSVDSFHP

TrEMBL top hitse value%identityAlignment
A0A6J1D6N7 uncharacterized protein LOC1110174384.2e-2941.06Show/hide
Query:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSC
        SQYLA+IK++  K S+IGEPIS +DH+++I++GLG EYN FVT+IQNR+D  +LEDVR+LLL Y+ RLEKQ +V+QLN+ QAN++ L       H  N  
Subjt:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSC

Query:  LPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQ-------TPPPQALLTTAH
        +PS     P                N   +P     P Q S P +P    S    +      +K GHT   C+HR NL Y+        P P AL    H
Subjt:  LPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQ-------TPPPQALLTTAH

Query:  NVQPSSA
        +V  SS+
Subjt:  NVQPSSA

A0A6J1DQX7 uncharacterized protein LOC1110223153.1e-4053Show/hide
Query:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP
        SQYLA+IK++ADKF+A+GEP+SYRDHLAH+LDGLGSEYN FVT+I NR D+PSLEDVRSLLL YEARL+KQ TV+QLN+AQANL  L + HNS  P  + 
Subjt:  SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP

Query:  SNPTLELPSI--HPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDS
        S P     S    PI      + L +P         SV  +P    S  I+        K GH+A +C+HRTN+AY    PQAL    H+VQPS   P S
Subjt:  SNPTLELPSI--HPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDS

A0A7J0DER3 Uncharacterized protein1.7e-2236.45Show/hide
Query:  YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP
        Y+ + + + +  ++IGEP++Y DHL + L GLG +YNPFVT+IQ++   PS+E+V SLLL Y+ARLE+Q+  + L+  QANL+ L       P F+  NP
Subjt:  YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP

Query:  -TLELPS----IHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAH---NVQPSSAI
         T   P+     HP        Q   P +S +P  +S    P   + +           K GHTA  C+HRTNL YQ PPP      A+   N   S++ 
Subjt:  -TLELPS----IHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAH---NVQPSSAI

Query:  PDSLTTMSVDSFHP
        P S   + +   HP
Subjt:  PDSLTTMSVDSFHP

A0A7J0E8R3 Uncharacterized protein1.3e-2236.28Show/hide
Query:  YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP
        Y+ + + + +  ++IGEP++Y DHL + L GLG +YNPFVT+IQ++   PS+E+V SLLL Y+ARLE+Q+  + L+  QANL+ L       P F+  NP
Subjt:  YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP

Query:  -TLELPS----IHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPP-----QALLTTAHNVQPSS
         T   P+     HP        Q   P +S +P  +S    P   + +           K GHTA  C+HRTNL YQ PPP      A +T   ++  SS
Subjt:  -TLELPS----IHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPP-----QALLTTAHNVQPSS

Query:  AIPDSLTTMSVDSFH
          P S +++   S++
Subjt:  AIPDSLTTMSVDSFH

A5BPS3 Uncharacterized protein3.6e-2834.56Show/hide
Query:  TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE---------------------------SQYLAQIKDVADKFSAIGE
        T   P  L +   N+ P+PI       +   +P PAKF+DD QLQ NP F+ WE                           S+YLA+IK+V DK+SA+GE
Subjt:  TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE---------------------------SQYLAQIKDVADKFSAIGE

Query:  PISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLPSF--RPSNPTLELPSIHPIF
        P+SYRD L + L+GL  EY+ FVT+I NR+D  SL++V SLL  Y   LE++ T +QL  +Q NL+    +   H +  P+F   P N     P+  PI 
Subjt:  PISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLPSF--RPSNPTLELPSIHPIF

Query:  LCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP
        L        +P     P+   Q+S   + +     F  +       KFGH AL C+HR NL YQ   P        N QP    P+ +  M   S  P
Subjt:  LCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACAGGGGAATCATCTTCTTCATCTTCCTTCACCTCCACGACTACACCAGTAGCTTCTCCAAATATTTCCCCAAATATCACTCCGGTTGTTACGCCGATAAACCA
ACCCCAAAATCCTCCTATTCAACCCGTACATCAACCCTTGCAGCTTCAACCTCCTCCAAATACTCTGATTCACTCTCCTAATCGCCCTGCCATTCGACCTCAACCACCAC
TTCCGCAATACCAGCAACCCATCGCCCCTCCCCAAACTCCAGTTTATTATCCTCAATTTTTCGCCCAGCCCTTTTATCCTTCTCAACTTTCGCGCCCTCAATCCCTACCA
AATGTGTTCCAAACTCAAAATCCATATCCCCAAGCGTTTGCTCCAACAGCTTTTACTCAACCTCAACCTCCGCCCCTACTGTCATTTATCCTCAACCTCCGACCTTCCCC
AATCCGATTGCACCTAATCCTTACCCAACCTTGCCGCAGCCCCTCACCTGCGAAGTTTATTGATGATCAGCAGCTACAACCGAATCCAGAGTTTCTTCTTTGGGAAAGCC
AATACCTAGCTCAGATAAAAGATGTTGCTGATAAATTCTCTGCAATAGGTGAACCTATATCCTATCGAGATCATTTAGCCCACATTCTAGATGGTCTTGGTAGTGAATAC
AACCCTTTTGTCACCACAATTCAAAATCGTACTGATAATCCCTCTCTTGAGGATGTGCGTAGTCTTCTTTTGGAATATGAAGCTCGTTTAGAGAAGCAAACAACTGTTGA
GCAACTTAATTTGGCCCAAGCAAACCTTAGTAGACTTCACATCCATAACAGCTGCCTTCCCTCTTTCCGACCCTCTAATCCAACCCTAGAACTCCCTTCAATCCACCCAA
TTTTCCTCTGTTTTCACCTCAATCAACTCCACCGGCCCTGTTTCTCAAAGTCTCCTAGGCAAACCTCAGTCCCAACCTATCCAGAAATGGACCTCTCGATCTTCATCAAA
CAAACCCCAATGTCAAATTTGTGGAAATTCGGTCATACTGCTCTCATTTGTCACCATAGAACCAACTTAGCTTATCAAACTCCACCACCCCAAGCCTTATTAACCACTGC
CCATAATGTTCAACCTTCATCTGCTATCCCTGATTCCCTAACCACTATGTCTGTTGATTCTTTCCACCCGATGAAAATTGGTTCCTTGATTCTGGAGCGACACATCACAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGACGACAGGGGAATCATCTTCTTCATCTTCCTTCACCTCCACGACTACACCAGTAGCTTCTCCAAATATTTCCCCAAATATCACTCCGGTTGTTACGCCGATAAACCA
ACCCCAAAATCCTCCTATTCAACCCGTACATCAACCCTTGCAGCTTCAACCTCCTCCAAATACTCTGATTCACTCTCCTAATCGCCCTGCCATTCGACCTCAACCACCAC
TTCCGCAATACCAGCAACCCATCGCCCCTCCCCAAACTCCAGTTTATTATCCTCAATTTTTCGCCCAGCCCTTTTATCCTTCTCAACTTTCGCGCCCTCAATCCCTACCA
AATGTGTTCCAAACTCAAAATCCATATCCCCAAGCGTTTGCTCCAACAGCTTTTACTCAACCTCAACCTCCGCCCCTACTGTCATTTATCCTCAACCTCCGACCTTCCCC
AATCCGATTGCACCTAATCCTTACCCAACCTTGCCGCAGCCCCTCACCTGCGAAGTTTATTGATGATCAGCAGCTACAACCGAATCCAGAGTTTCTTCTTTGGGAAAGCC
AATACCTAGCTCAGATAAAAGATGTTGCTGATAAATTCTCTGCAATAGGTGAACCTATATCCTATCGAGATCATTTAGCCCACATTCTAGATGGTCTTGGTAGTGAATAC
AACCCTTTTGTCACCACAATTCAAAATCGTACTGATAATCCCTCTCTTGAGGATGTGCGTAGTCTTCTTTTGGAATATGAAGCTCGTTTAGAGAAGCAAACAACTGTTGA
GCAACTTAATTTGGCCCAAGCAAACCTTAGTAGACTTCACATCCATAACAGCTGCCTTCCCTCTTTCCGACCCTCTAATCCAACCCTAGAACTCCCTTCAATCCACCCAA
TTTTCCTCTGTTTTCACCTCAATCAACTCCACCGGCCCTGTTTCTCAAAGTCTCCTAGGCAAACCTCAGTCCCAACCTATCCAGAAATGGACCTCTCGATCTTCATCAAA
CAAACCCCAATGTCAAATTTGTGGAAATTCGGTCATACTGCTCTCATTTGTCACCATAGAACCAACTTAGCTTATCAAACTCCACCACCCCAAGCCTTATTAACCACTGC
CCATAATGTTCAACCTTCATCTGCTATCCCTGATTCCCTAACCACTATGTCTGTTGATTCTTTCCACCCGATGAAAATTGGTTCCTTGATTCTGGAGCGACACATCACAT
GA
Protein sequenceShow/hide protein sequence
MTTGESSSSSSFTSTTTPVASPNISPNITPVVTPINQPQNPPIQPVHQPLQLQPPPNTLIHSPNRPAIRPQPPLPQYQQPIAPPQTPVYYPQFFAQPFYPSQLSRPQSLP
NVFQTQNPYPQAFAPTAFTQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWESQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEY
NPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIK
QTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHPMKIGSLILERHIT