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Lag0019778 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019778
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease T(2)
Genome locationchr5:45374827..45377658
RNA-Seq ExpressionLag0019778
SyntenyLag0019778
Gene Ontology termsGO:0006401 - RNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922894.1 ribonuclease 2-like [Cucurbita moschata]1.6e-2663.74Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTC +PVI+ +YDYF TTL LF N+NVT+ LEDA I AS+T+KY I DV +AV+ AF A+P+L+C +NG+I+ELRLCFDK+FK
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

XP_022984766.1 ribonuclease 2-like [Cucurbita maxima]4.8e-2862.64Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GEYDYF TTL +F  +NVTKAL DAG  ASNTEKYP+GDV DAV+ A +++P+++C + G ++EL +CFDK+F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

XP_023551927.1 ribonuclease 2-like [Cucurbita pepo subsp. pepo]2.4e-2763.44Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFKRV
        W  +YEKHGTC +PVI+ +YDYF TTL LF N+NVT+ALEDA I AS+T+KY I DV +AV+ AF+A+P+LTC + G+I+ELRLCFDK+FK +
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFKRV

XP_023553229.1 ribonuclease 2-like [Cucurbita pepo subsp. pepo]7.0e-2761.54Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GEYDYF TTL +F  +NVTKAL DAG  ASNTEKY +GDV DAV+ A  ++P+++C + G ++EL +CFDK+F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

XP_038876700.1 ribonuclease 2-like [Benincasa hispida]5.3e-2761.54Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GEYDYF TTL +F  +NVTK L DAG  ASNTEKYPI DV  A++  F+++P++TC + GV++EL +CFDK F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

TrEMBL top hitse value%identityAlignment
A0A1S3CJH0 Ribonuclease T(2)2.2e-2659.57Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFKRVV
        W  +YEKHGTC +PVI+ EYDYF TTL LF  +NVT+ALE+A I AS+  KYPI DV +AV  AF A+P+L C++NG+I+E+ LCFDK FK ++
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFKRVV

A0A6J1CGP7 Ribonuclease T(2)9.8e-2761.54Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GE+DYF TTL +F  +NVTK L DAG  AS+TEKY +GDV  AVQ AF+A+P+++C + G ++EL LCFDK F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

A0A6J1E4S1 Ribonuclease T(2)7.5e-2763.74Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTC +PVI+ +YDYF TTL LF N+NVT+ LEDA I AS+T+KY I DV +AV+ AF A+P+L+C +NG+I+ELRLCFDK+FK
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

A0A6J1EA39 Ribonuclease T(2)9.8e-2760.44Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GE+DYF TTL +F  +NVTKAL DAG  ASNTEKYP+ DV DAV+ A +++P+++C + G ++EL +CFDK F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

A0A6J1J670 Ribonuclease T(2)2.3e-2862.64Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  +YEKHGTCAAPVI+GEYDYF TTL +F  +NVTKAL DAG  ASNTEKYP+GDV DAV+ A +++P+++C + G ++EL +CFDK+F+
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

SwissProt top hitse value%identityAlignment
O80325 Ribonuclease S-77.8e-0526.09Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFL--NHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAF-HASPRLTCVENGVIQEL---RLCFDKDFKRVV
        W  ++ KHG+C  P I+ +  YF T +++++    NV++ L  A I+    ++ P+  +++A++ +  +  P+  C +N  + EL    LC D    +  
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFL--NHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAF-HASPRLTCVENGVIQEL---RLCFDKDFKRVV

Query:  GLHHCSHHRTPPSQP
           +C H   PP  P
Subjt:  GLHHCSHHRTPPSQP

P42814 Ribonuclease 29.8e-2453.85Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  ++EKHGTC++PV   EY+YF TTL+L+L HNVT  L  AG  ASN+EKYP+G +  A+Q AFH +P + C +   I E+R+CF KDFK
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

P80022 Extracellular ribonuclease LE1.2e-0528.57Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTC----VENGVIQELRLCFD
        W  ++EKHGTCA  V+  ++ YF   LDL    ++   L+ A I     E Y + ++++A++ A   +P + C      N  + ++ +C D
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTC----VENGVIQELRLCFD

P80196 Intracellular ribonuclease LX2.9e-0728.71Show/hide
Query:  LHHWCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTC----VENGVIQELRLCFDKDFKRV
        L  W  ++ KHGTC+A   + ++ YF T LD     N+ + L +AGIK  N + Y +  +K A++     +P + C      N  + ++ LC D    + 
Subjt:  LHHWCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTC----VENGVIQELRLCFDKDFKRV

Query:  V
        +
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT2G39780.1 ribonuclease 27.0e-2553.85Show/hide
Query:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        W  ++EKHGTC++PV   EY+YF TTL+L+L HNVT  L  AG  ASN+EKYP+G +  A+Q AFH +P + C +   I E+R+CF KDFK
Subjt:  WCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK

AT2G39780.2 ribonuclease 21.8e-0950.94Show/hide
Query:  LEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK
        L  AG  ASN+EKYP+G +  A+Q AFH +P + C +   I E+R+CF KDFK
Subjt:  LEDAGIKASNTEKYPIGDVKDAVQVAFHASPRLTCVENGVIQELRLCFDKDFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCAATGGATCATTTTGGGCTCATGAGGTTCAAATTCTTCCCTCTCCAATCTTCTTCTTCTGACATCCATCAAAATTTGATACTAATCCCAGTCTTCCTCTCTTG
TTGTGATGCCCATTTTTACATGTTACACCATTGGTGTGGGAAGTATGAGAAGCATGGCACCTGCGCAGCTCCTGTAATCATAGGCGAATATGATTACTTCACCACAACCC
TCGACCTTTTCTTAAACCACAATGTCACTAAAGCTTTGGAGGATGCTGGAATTAAAGCTTCCAATACTGAAAAGTATCCCATTGGCGATGTCAAAGATGCAGTTCAAGTT
GCTTTCCATGCAAGTCCAAGGCTTACATGTGTTGAAAATGGAGTTATTCAGGAACTTCGGCTATGCTTTGACAAAGACTTTAAGAGAGTCGTCGGACTCCACCACTGCAG
CCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTCACTCTCTCTGTGCAATCGCTCCCCGTC
GCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACCAATGGATCATTTTGGGCTCATGAGGTTCAAATTCTTCCCTCTCCAATCTTCTTCTTCTGACATCCATCAAAATTTGATACTAATCCCAGTCTTCCTCTCTTG
TTGTGATGCCCATTTTTACATGTTACACCATTGGTGTGGGAAGTATGAGAAGCATGGCACCTGCGCAGCTCCTGTAATCATAGGCGAATATGATTACTTCACCACAACCC
TCGACCTTTTCTTAAACCACAATGTCACTAAAGCTTTGGAGGATGCTGGAATTAAAGCTTCCAATACTGAAAAGTATCCCATTGGCGATGTCAAAGATGCAGTTCAAGTT
GCTTTCCATGCAAGTCCAAGGCTTACATGTGTTGAAAATGGAGTTATTCAGGAACTTCGGCTATGCTTTGACAAAGACTTTAAGAGAGTCGTCGGACTCCACCACTGCAG
CCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTCACTCTCTCTGTGCAATCGCTCCCCGTC
GCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCGTTGA
Protein sequenceShow/hide protein sequence
MRPMDHFGLMRFKFFPLQSSSSDIHQNLILIPVFLSCCDAHFYMLHHWCGKYEKHGTCAAPVIIGEYDYFTTTLDLFLNHNVTKALEDAGIKASNTEKYPIGDVKDAVQV
AFHASPRLTCVENGVIQELRLCFDKDFKRVVGLHHCSHHRTPPSQPSPDSTAHPSSLISLSHTRHSLCAIAPRRRTPNVTRRRTLLKTRASR