; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019838 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019838
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPolycomb group protein EMBRYONIC FLOWER 2
Genome locationchr5:45955214..45957122
RNA-Seq ExpressionLag0019838
SyntenyLag0019838
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR019135 - Polycomb protein, VEFS-Box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877055.1 polycomb group protein EMBRYONIC FLOWER 2 isoform X1 [Benincasa hispida]7.0e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEK+MMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+PKS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

XP_038877064.1 polycomb group protein EMBRYONIC FLOWER 2 isoform X2 [Benincasa hispida]7.0e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEK+MMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+PKS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

XP_038877101.1 polycomb group protein EMBRYONIC FLOWER 2 isoform X6 [Benincasa hispida]7.0e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEK+MMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+PKS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

XP_038877126.1 polycomb group protein EMBRYONIC FLOWER 2 isoform X9 [Benincasa hispida]7.0e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEK+MMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+PKS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

XP_038877135.1 polycomb group protein EMBRYONIC FLOWER 2 isoform X10 [Benincasa hispida]7.0e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEK+MMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+PKS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

TrEMBL top hitse value%identityAlignment
A0A6J1FNT0 polycomb group protein EMBRYONIC FLOWER 2-like isoform X19.8e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+ KS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

A0A6J1JFC4 polycomb group protein EMBRYONIC FLOWER 2 isoform X59.8e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+ KS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

A0A6J1JLU1 polycomb group protein EMBRYONIC FLOWER 2 isoform X29.8e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+ KS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

A0A6J1JNS7 polycomb group protein EMBRYONIC FLOWER 2 isoform X19.8e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+ KS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

A0A6J1JPS0 polycomb group protein EMBRYONIC FLOWER 2 isoform X49.8e-6497.58Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPKS
        DANSMNSCNIILERIHSE S+ KS
Subjt:  DANSMNSCNIILERIHSEVSNPKS

SwissProt top hitse value%identityAlignment
P0DKJ7 Polycomb group protein FERTILIZATION-INDEPENDENT SEED 23.4e-2950.89Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PM  EQV+S+ DSE+E DD   D+ +R  L+  V V+K+EK+ M++WN FVRKQRV+ADGH+PWACE F++LH   +  + +  W WR+F IKLWN+GL+
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIIL
         A + + C  IL
Subjt:  DANSMNSCNIIL

Q0JF48 Polycomb group protein EMF2A2.5e-4871.54Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PM  E+VLSD DSEDEVDDD+ADLEDRRMLDDFVDVTKDEK++MHMWNSF+RKQ +LAD H+PWACEAFS+ HG  L++  ALLW WR+FMIKLWNH LL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPK
         A +M++CN IL+ I +E S+PK
Subjt:  DANSMNSCNIILERIHSEVSNPK

Q69KN0 Polycomb group protein EMF2B4.0e-5480.49Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQV SDRDSEDEVDDD+AD EDRRMLDDFVDVTKDEK +MHMWNSFVRKQRVLADGHIPWACEAFSQ HG  LV+ PALLWCWR FM+KLWNH LL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERIHSEVSNPK
        DA +MN+CN ILE   +  S+PK
Subjt:  DANSMNSCNIILERIHSEVSNPK

Q8L6Y4 Polycomb group protein EMBRYONIC FLOWER 25.6e-5686.09Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVAD EDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFS+LHGP +V+TP L+WCWR+FM+KLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERI
        DA +MN+CN  LE++
Subjt:  DANSMNSCNIILERI

Q8W5B1 Polycomb group protein VERNALIZATION 21.2e-4573.91Show/hide
Query:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG
        V PMALEQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV KDEKQ MH+WNSFVRKQRV+ADGHI WACE FS+ +   L    +L WCWRLF+IKLWNHG
Subjt:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG

Query:  LLDANSMNSCNIILE
        L+D+ ++N+CN ILE
Subjt:  LLDANSMNSCNIILE

Arabidopsis top hitse value%identityAlignment
AT4G16845.1 VEFS-Box of polycomb protein8.2e-4773.91Show/hide
Query:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG
        V PMALEQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV KDEKQ MH+WNSFVRKQRV+ADGHI WACE FS+ +   L    +L WCWRLF+IKLWNHG
Subjt:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG

Query:  LLDANSMNSCNIILE
        L+D+ ++N+CN ILE
Subjt:  LLDANSMNSCNIILE

AT4G16845.2 VEFS-Box of polycomb protein8.2e-4773.91Show/hide
Query:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG
        V PMALEQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV KDEKQ MH+WNSFVRKQRV+ADGHI WACE FS+ +   L    +L WCWRLF+IKLWNHG
Subjt:  VIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHG

Query:  LLDANSMNSCNIILE
        L+D+ ++N+CN ILE
Subjt:  LLDANSMNSCNIILE

AT5G51230.1 VEFS-Box of polycomb protein3.9e-5786.09Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVAD EDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFS+LHGP +V+TP L+WCWR+FM+KLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERI
        DA +MN+CN  LE++
Subjt:  DANSMNSCNIILERI

AT5G51230.2 VEFS-Box of polycomb protein3.9e-5786.09Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVAD EDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFS+LHGP +V+TP L+WCWR+FM+KLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERI
        DA +MN+CN  LE++
Subjt:  DANSMNSCNIILERI

AT5G51230.3 VEFS-Box of polycomb protein3.9e-5786.09Show/hide
Query:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL
        PMALEQVLSDRDSEDEVDDDVAD EDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFS+LHGP +V+TP L+WCWR+FM+KLWNHGLL
Subjt:  PMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLL

Query:  DANSMNSCNIILERI
        DA +MN+CN  LE++
Subjt:  DANSMNSCNIILERI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATGGATGGAAGTTAGCTCACCTTCACAGGATTATGATGCTTTGTCCCGTCCAGCACATGTCACGAAGTTTGGTGAATTTTGGCTCGTTTCGAAAAAGTTCGGT
AACTTTTGCAGTCTTAAGTATGTTACAAGTCGATAGGATTCTTGCAAAGGCAGGCACTGCCAAGTGCTATGAGTTGGCACCTCATCCATTGAAGAATTGTGTTGTTATAC
CAATGGCATTGGAACAAGTTTTATCGGATCGAGACAGTGAAGATGAAGTTGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGATGTAACC
AAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGCCATATTCCCTGGGCTTGTGAGGCATTTTCACAATTACATGG
ACCAAACCTTGTCAAAACTCCAGCTCTGCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATCA
TTCTTGAAAGAATACATAGTGAAGTTTCCAATCCCAAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATGGATGGAAGTTAGCTCACCTTCACAGGATTATGATGCTTTGTCCCGTCCAGCACATGTCACGAAGTTTGGTGAATTTTGGCTCGTTTCGAAAAAGTTCGGT
AACTTTTGCAGTCTTAAGTATGTTACAAGTCGATAGGATTCTTGCAAAGGCAGGCACTGCCAAGTGCTATGAGTTGGCACCTCATCCATTGAAGAATTGTGTTGTTATAC
CAATGGCATTGGAACAAGTTTTATCGGATCGAGACAGTGAAGATGAAGTTGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGATGTAACC
AAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGCCATATTCCCTGGGCTTGTGAGGCATTTTCACAATTACATGG
ACCAAACCTTGTCAAAACTCCAGCTCTGCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATCA
TTCTTGAAAGAATACATAGTGAAGTTTCCAATCCCAAAAGCTGA
Protein sequenceShow/hide protein sequence
MGDGWKLAHLHRIMMLCPVQHMSRSLVNFGSFRKSSVTFAVLSMLQVDRILAKAGTAKCYELAPHPLKNCVVIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVT
KDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHSEVSNPKS