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Lag0019872 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019872
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr5:46255594..46255929
RNA-Seq ExpressionLag0019872
SyntenyLag0019872
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN69412.1 hypothetical protein VITISV_021748, partial [Vitis vinifera]5.6e-1043.59Show/hide
Query:  LHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        L NL  ++      SG+ INL+KS + GIN     + ++A  F CK  +   SYLGLPL G+PKT+ FW PV+E+I +
Subjt:  LHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

CAN70431.1 hypothetical protein VITISV_030910 [Vitis vinifera]1.6e-0942.31Show/hide
Query:  LHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        L NL  ++      SG+ INL+KS + GIN     + ++A  F C+  +   SYLGLPL G+PKT+ FW PV+E+I +
Subjt:  LHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]3.3e-1041.86Show/hide
Query:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ
        +DD + +NL  V+ES    SG+ IN  K  ++GIN +   +  +A +  C+ G     YLGLPL G+PK  +FW PV+EKIEK  +
Subjt:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]1.2e-0941.86Show/hide
Query:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ
        ED+   +NL +V+      SG+ IN  K  + GIN D   +  +A  + C+ G     YLGLPL G PK L FW PV+EK+EK  Q
Subjt:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ

XP_020420593.1 uncharacterized protein LOC18774736 [Prunus persica]1.9e-1039.53Show/hide
Query:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ
        + D+  +NL +++E     SG+ IN  K  L+GIN+D   +  +A  + C+ G    SYLGLPL G+P+ + FW PV+EK+E   Q
Subjt:  EDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQ

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein4.4e-1344.05Show/hide
Query:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        +E+++SLH L +V+E+    SG+ INL KS+LLGI MD   +  +A    C+ G     YLG+PL GSP+  +FW PV++K  K
Subjt:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

A0A803P8A0 Uncharacterized protein8.4e-1242.86Show/hide
Query:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        ++D+ SL  L K++E+  G SG+ +NL KS+LLGI +   A+   A    C+ G+   +YLG+PL GSP+   FW PVL+K  K
Subjt:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

A0A803QEA6 Uncharacterized protein4.9e-1244.05Show/hide
Query:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        ++D+ SL  L KV+++  G SG+ +NL KS+LLGI M+  A+   AI   C+ G+   +YLG+ L GSP+  +FW PVL+K  K
Subjt:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

A0A803QI00 Uncharacterized protein3.2e-1140.48Show/hide
Query:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK
        ++D+ SL  L +++E+  G SG+ +NL KS+LLGI+++   +   A    C+ G    +YLG+PL GSP+   FW PVL+K  K
Subjt:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEK

A0A803QQM3 Uncharacterized protein5.2e-1445.68Show/hide
Query:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEK
        ++D+ SL  L K++E+  G SG+ +NL KS+LLG+ MD  A+   AI+  C+ G+   +YLG+PL GSP+  +FW PVL+K
Subjt:  MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGATAAATCCCTCCACAATCTCTACAAAGTGATTGAGTCTTTAGAAGGAACATCAGGGATTAACATAAACCTTCAAAAATCTGAATTGCTGGGCATCAACAT
GGACCCATCTGCCATAGGAGCTATTGCTATTGAATTTGCTTGTAAAACTGGTCAAGGGCATAGTTCCTACTTAGGCCTCCCTCTCAATGGCTCTCCCAAGACTTTGGCTT
TCTGGACACCCGTCCTTGAGAAGATTGAAAAAGACTATCAGCTGGGGGGAGGGGGGCCTCACCTTAATCCAAGCAACTCTATTGAACCTCCCCACCTATTACCTATCACT
TTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGATAAATCCCTCCACAATCTCTACAAAGTGATTGAGTCTTTAGAAGGAACATCAGGGATTAACATAAACCTTCAAAAATCTGAATTGCTGGGCATCAACAT
GGACCCATCTGCCATAGGAGCTATTGCTATTGAATTTGCTTGTAAAACTGGTCAAGGGCATAGTTCCTACTTAGGCCTCCCTCTCAATGGCTCTCCCAAGACTTTGGCTT
TCTGGACACCCGTCCTTGAGAAGATTGAAAAAGACTATCAGCTGGGGGGAGGGGGGCCTCACCTTAATCCAAGCAACTCTATTGAACCTCCCCACCTATTACCTATCACT
TTTTAA
Protein sequenceShow/hide protein sequence
MEDDKSLHNLYKVIESLEGTSGININLQKSELLGINMDPSAIGAIAIEFACKTGQGHSSYLGLPLNGSPKTLAFWTPVLEKIEKDYQLGGGGPHLNPSNSIEPPHLLPIT
F