; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019892 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019892
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:46465359..46465835
RNA-Seq ExpressionLag0019892
SyntenyLag0019892
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW46854.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.8e-2036.49Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ GL +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        +ERNNR F    RS   L + +   ++ WAS S  F       + LNW
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

RVW56512.1 hypothetical protein CK203_072566 [Vitis vinifera]2.2e-2036.18Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ G  +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEAFM
        +ERNNR F    RS   L + +   +S WAS S  F       + LNW  F+
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEAFM

RVW70627.1 Exocyst complex component EXO70A1 [Vitis vinifera]2.9e-2035.57Show/hide
Query:  SILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTI
        S+ H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF + G+ +  P  I+  L+  F    +S R ++L Q   +  IW +
Subjt:  SILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTI

Query:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        W+ERNNR F    R+   + + ++  +S WAS +  F     + + +NW
Subjt:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

RVW99804.1 putative ribonuclease H protein [Vitis vinifera]2.2e-2036.42Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPP--FIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTI
        ++H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF + GL + +PP   +D  +I       S + + L Q   +  +W +
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPP--FIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTI

Query:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEA
        W+ERNNR F    R+   L + +   +S WAS +  FS    + + LNW A
Subjt:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEA

RVX02903.1 Actin-related protein 7 [Vitis vinifera]1.7e-2037.16Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ GL +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        +ERNNR F    RS   L + +   +S WAS S  F       + LNW
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

TrEMBL top hitse value%identityAlignment
A0A438EGK9 Transposon TX1 uncharacterized 149 kDa protein1.8e-2036.49Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ GL +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        +ERNNR F    RS   L + +   ++ WAS S  F       + LNW
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

A0A438F981 zf-RVT domain-containing protein1.1e-2036.18Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ G  +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEAFM
        +ERNNR F    RS   L + +   +S WAS S  F       + LNW  F+
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEAFM

A0A438GEJ4 Exocyst subunit Exo70 family protein1.4e-2035.57Show/hide
Query:  SILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTI
        S+ H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF + G+ +  P  I+  L+  F    +S R ++L Q   +  IW +
Subjt:  SILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTI

Query:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        W+ERNNR F    R+   + + ++  +S WAS +  F     + + +NW
Subjt:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

A0A438ITJ9 Putative ribonuclease H protein1.1e-2036.42Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPP--FIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTI
        ++H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF + GL + +PP   +D  +I       S + + L Q   +  +W +
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPP--FIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTI

Query:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEA
        W+ERNNR F    R+   L + +   +S WAS +  FS    + + LNW A
Subjt:  WKERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEA

A0A438J1R4 Actin-related protein 78.2e-2137.16Show/hide
Query:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW
        + H  +NT DKLQ +  +  + PQWC LC+ + ESIDH+FLHC V   +W  LF++ GL +  P   +  L+  F    +S R + L Q   +  +W +W
Subjt:  ILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQR-QVLIQAFVVAAIWTIW

Query:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW
        +ERNNR F    RS   L + +   +S WAS S  F       + LNW
Subjt:  KERNNRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-0627.83Show/hide
Query:  INTADKLQQKFKHL---MISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTIWKER
        +N   +L  K + +    I P  C  C    E+  H+F  CE A  +W  ++  + +H   P   +  +  + N         +++    A+++TIWKER
Subjt:  INTADKLQQKFKHL---MISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTIWKER

Query:  NNRTFSSLSRSVAAL
        N R   S SR  AAL
Subjt:  NNRTFSSLSRSVAAL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-0729.17Show/hide
Query:  INTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQ----VLIQAFVVAAIWTIWKE
        ++T D+LQ     +   P  C LC    +S  H+F  C+ +  +W+     T L+   PP   A L+D  N   S  R+    ++I+    + ++ IW+E
Subjt:  INTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQ----VLIQAFVVAAIWTIWKE

Query:  RNNRTFSSLSRSVAALREDM
        RN R  S +SRS  ++ +D+
Subjt:  RNNRTFSSLSRSVAALREDM

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.3e-0532.56Show/hide
Query:  LMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTIWKERNN
        L ISP  C LC  S+E+ DH+ L C  + SIW  +     L  P+   +   L+      T+S   ++ +    A +  IWK+RNN
Subjt:  LMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTIWKERNN

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0731.25Show/hide
Query:  LCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPF----IDAFLIDI-FNSHTSSQRQVLIQAFVVAAIWTIWKERNNRTFSSLSRSVAALR
        LC N  E+  H+F  C  + +IW+          P PPF      ++++ +   SH+++  ++L+Q    +A++ +WKERN R F+S+S S ++LR
Subjt:  LCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPF----IDAFLIDI-FNSHTSSQRQVLIQAFVVAAIWTIWKERNNRTFSSLSRSVAALR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTCTTTTTCAGGTCCATCCTTCACAGAAGCATTAACACGGCCGACAAGCTTCAGCAGAAGTTCAAGCATTTAATGATCAGTCCTCAATGGTGCCCTCTTTGTCG
CAACAGCTTGGAAAGCATTGATCATATTTTTCTTCATTGCGAAGTAGCTTTCTCAATTTGGCAGCATCTGTTTCGTGTTACAGGCCTCCATTTTCCGTTGCCCCCGTTCA
TTGACGCGTTCCTCATTGACATTTTCAATAGTCATACTTCATCTCAAAGGCAAGTCCTCATTCAGGCCTTTGTAGTGGCCGCTATCTGGACTATCTGGAAAGAAAGGAAC
AATCGCACCTTTTCTAGCCTATCGCGCTCAGTCGCTGCTCTTAGGGAAGACATGTACGCTCTTGCTAGCTTTTGGGCTTCATCCTCTACTTTCTTTTCTAATTATGAAGC
GGCTTCGATCTCCCTAAATTGGGAAGCTTTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTCTTTTTCAGGTCCATCCTTCACAGAAGCATTAACACGGCCGACAAGCTTCAGCAGAAGTTCAAGCATTTAATGATCAGTCCTCAATGGTGCCCTCTTTGTCG
CAACAGCTTGGAAAGCATTGATCATATTTTTCTTCATTGCGAAGTAGCTTTCTCAATTTGGCAGCATCTGTTTCGTGTTACAGGCCTCCATTTTCCGTTGCCCCCGTTCA
TTGACGCGTTCCTCATTGACATTTTCAATAGTCATACTTCATCTCAAAGGCAAGTCCTCATTCAGGCCTTTGTAGTGGCCGCTATCTGGACTATCTGGAAAGAAAGGAAC
AATCGCACCTTTTCTAGCCTATCGCGCTCAGTCGCTGCTCTTAGGGAAGACATGTACGCTCTTGCTAGCTTTTGGGCTTCATCCTCTACTTTCTTTTCTAATTATGAAGC
GGCTTCGATCTCCCTAAATTGGGAAGCTTTTATGTAG
Protein sequenceShow/hide protein sequence
MVFFFRSILHRSINTADKLQQKFKHLMISPQWCPLCRNSLESIDHIFLHCEVAFSIWQHLFRVTGLHFPLPPFIDAFLIDIFNSHTSSQRQVLIQAFVVAAIWTIWKERN
NRTFSSLSRSVAALREDMYALASFWASSSTFFSNYEAASISLNWEAFM