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Lag0019901 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019901
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:46570011..46575396
RNA-Seq ExpressionLag0019901
SyntenyLag0019901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600177.1 hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1478.46Show/hide
Query:  MVSLK-ISIVLKLVVCFALLLIASPIFAIDNAPRTRKMGMEYKNVGKDVVVTKAKRPLSADAPWG
        MVSLK IS VLKL+VCFALLLIASPI A+DN PR RKMGMEYK VGK VVV K  R LSAD+PWG
Subjt:  MVSLK-ISIVLKLVVCFALLLIASPIFAIDNAPRTRKMGMEYKNVGKDVVVTKAKRPLSADAPWG

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0553.25Show/hide
Query:  VAWKKVVFFALLFLVLNATARELVATNNTAR-----EMDTVKDRRLIIQDQLDRPWKGQYKFKSPPPAPRSPPHCPP
        V WK+VVFFALL L  N +ARELV TN  AR      ++T   RRLI + QLD  W G Y   SPPP  R PP  PP
Subjt:  VAWKKVVFFALLFLVLNATARELVATNNTAR-----EMDTVKDRRLIIQDQLDRPWKGQYKFKSPPPAPRSPPHCPP

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-1277.36Show/hide
Query:  LVVCFALLLIASPIFAIDNAPRTRKMGMEYKNVGKDVVVTKAKRPLSADAPWG
        L+VCFALLLIASPI A+DN PR RKMGMEYK VGK VVV K  R LSAD+PWG
Subjt:  LVVCFALLLIASPIFAIDNAPRTRKMGMEYKNVGKDVVVTKAKRPLSADAPWG

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-0552.63Show/hide
Query:  VAWKKVVFFALLFLVLNATARELVATNNTAR-----EMDTVKDRRLIIQDQLDRPWKGQYKFKSPPPAPRSPPHCP
        V WK+VVFFALL L  N +ARELV TN  AR      ++T   RRLI + QLD  W G Y   SPPP  R PP  P
Subjt:  VAWKKVVFFALLFLVLNATARELVATNNTAR-----EMDTVKDRRLIIQDQLDRPWKGQYKFKSPPPAPRSPPHCP

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCCCTCAAAATTTCCATTGTGTTGAAACTTGTAGTTTGCTTTGCTTTGCTTCTCATTGCCTCTCCCATTTTTGCAATCGACAATGCTCCTCGTACTCGTAAGAT
GGGTATGGAGTACAAAAATGTTGGGAAGGATGTGGTGGTAACAAAAGCAAAGAGACCATTGTCTGCTGATGCCCCATGGGGAGCTTATATAGTGGCATGGAAGAAAGTTG
TGTTCTTTGCTTTGCTTTTCCTTGTTCTCAATGCTACTGCAAGGGAACTTGTAGCGACGAATAACACAGCTCGTGAGATGGATACTGTGAAAGATAGGAGATTGATTATT
CAAGATCAGTTGGATCGTCCTTGGAAGGGACAATATAAATTTAAATCTCCTCCTCCTGCGCCTCGTTCACCTCCTCATTGTCCTCCTTTGCTTTCTAAGGGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCCCTCAAAATTTCCATTGTGTTGAAACTTGTAGTTTGCTTTGCTTTGCTTCTCATTGCCTCTCCCATTTTTGCAATCGACAATGCTCCTCGTACTCGTAAGAT
GGGTATGGAGTACAAAAATGTTGGGAAGGATGTGGTGGTAACAAAAGCAAAGAGACCATTGTCTGCTGATGCCCCATGGGGAGCTTATATAGTGGCATGGAAGAAAGTTG
TGTTCTTTGCTTTGCTTTTCCTTGTTCTCAATGCTACTGCAAGGGAACTTGTAGCGACGAATAACACAGCTCGTGAGATGGATACTGTGAAAGATAGGAGATTGATTATT
CAAGATCAGTTGGATCGTCCTTGGAAGGGACAATATAAATTTAAATCTCCTCCTCCTGCGCCTCGTTCACCTCCTCATTGTCCTCCTTTGCTTTCTAAGGGCAATTAG
Protein sequenceShow/hide protein sequence
MVSLKISIVLKLVVCFALLLIASPIFAIDNAPRTRKMGMEYKNVGKDVVVTKAKRPLSADAPWGAYIVAWKKVVFFALLFLVLNATARELVATNNTAREMDTVKDRRLII
QDQLDRPWKGQYKFKSPPPAPRSPPHCPPLLSKGN