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Lag0019957 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019957
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationchr5:46970330..46970883
RNA-Seq ExpressionLag0019957
SyntenyLag0019957
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053489.1 hypothetical protein E6C27_scaffold190G00380 [Cucumis melo var. makuwa]4.4e-0580.65Show/hide
Query:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
        AA L+GQM+VEFAKCECCGLTEEC  AYI G
Subjt:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
KGN58440.1 hypothetical protein Csa_001716 [Cucumis sativus]4.4e-0580.65Show/hide
Query:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
        AA L+GQM+VEFAKCECCGLTEEC  AYI G
Subjt:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
XP_021294398.1 uncharacterized protein LOC110424195 [Herrania umbratica]4.8e-0480Show/hide
Query:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TAA LV Q EVEFAKC+CCGLTEEC  AYI
Subjt:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
XP_022777231.1 uncharacterized protein LOC111318623 [Durio zibethinus]2.8e-0477.42Show/hide
Query:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TT+A LV Q EVEFAKC+CCGLTEEC  AYI
Subjt:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI
XP_038901315.1 uncharacterized protein LOC120088232 [Benincasa hispida]2.0e-0583.87Show/hide
Query:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
        AA L+GQMEVEFAKCECCGLTEEC  AYI G
Subjt:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
TrEMBL top hitse value%identityAlignment
A0A061GBP7 Uncharacterized protein2.3e-0480Show/hide
Query:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TAA LV Q EVEFAKC+CCGLTEEC  AYI
Subjt:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
A0A0A0L915 Uncharacterized protein2.1e-0580.65Show/hide
Query:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
        AA L+GQM+VEFAKCECCGLTEEC  AYI G
Subjt:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
A0A5A7UJ52 Uncharacterized protein2.1e-0580.65Show/hide
Query:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
        AA L+GQM+VEFAKCECCGLTEEC  AYI G
Subjt:  AAGLVGQMEVEFAKCECCGLTEECPEAYISG
A0A6J1B5C7 uncharacterized protein LOC1104241952.3e-0480Show/hide
Query:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TAA LV Q EVEFAKC+CCGLTEEC  AYI
Subjt:  TAAGLVGQMEVEFAKCECCGLTEECPEAYI
A0A6P6BJJ7 uncharacterized protein LOC1113186231.4e-0477.42Show/hide
Query:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TT+A LV Q EVEFAKC+CCGLTEEC  AYI
Subjt:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25840.1 Protein of unknown function (DUF1677)3.9e-0458.06Show/hide
Query:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI
        TT   L    EVE AKCECCG++EEC   YI
Subjt:  TTAAGLVGQMEVEFAKCECCGLTEECPEAYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGAGATACTAGTCCTTCCTTATATACCCATGATCATCCCCTTATCTAGCCGATGTGGGACTTTGGTCGCACTCCCAACATGGGTCCGTGAAATTCGTGAAAA
GAATTCTGGGGTTCGGCCATTGAAGGAGGAGAAAGAGTTAGAGGAGGAGGGAACGAGAGAGACGGTGTTCGGAAATGTCTGCAACGATCATCAAAATCTGACGACGGCAG
CGGGGCTGGTTGGGCAAATGGAAGTTGAATTCGCGAAATGCGAGTGTTGTGGACTGACGGAGGAGTGTCCAGAAGCTTACATCTCCGGCGGTGGGGGAAGATCCGGCGGC
GGCGGGAGGAGGCTCCGGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGAGATACTAGTCCTTCCTTATATACCCATGATCATCCCCTTATCTAGCCGATGTGGGACTTTGGTCGCACTCCCAACATGGGTCCGTGAAATTCGTGAAAA
GAATTCTGGGGTTCGGCCATTGAAGGAGGAGAAAGAGTTAGAGGAGGAGGGAACGAGAGAGACGGTGTTCGGAAATGTCTGCAACGATCATCAAAATCTGACGACGGCAG
CGGGGCTGGTTGGGCAAATGGAAGTTGAATTCGCGAAATGCGAGTGTTGTGGACTGACGGAGGAGTGTCCAGAAGCTTACATCTCCGGCGGTGGGGGAAGATCCGGCGGC
GGCGGGAGGAGGCTCCGGCGATAG
Protein sequenceShow/hide protein sequence
MSMEILVLPYIPMIIPLSSRCGTLVALPTWVREIREKNSGVRPLKEEKELEEEGTRETVFGNVCNDHQNLTTAAGLVGQMEVEFAKCECCGLTEECPEAYISGGGGRSGG
GGRRLRR