CuGenDBv2

Gene ID	Lag0019963
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	RAB6-interacting golgin
Genome location	chr5:47044238..47049703
RNA-Seq Expression	Lag0019963
Synteny	Lag0019963
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574142.1 hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-113

89.58

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

KAG7013196.1 hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma]

9.3e-113

89.19

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGK+KNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

XP_022945967.1 uncharacterized protein LOC111450054 [Cucurbita moschata]

4.2e-113

89.58

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

XP_022968531.1 uncharacterized protein LOC111467736 [Cucurbita maxima]

1.6e-112

89.58

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ M S+QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

XP_023541472.1 uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo]

1.0e-111

89.19

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALE LRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MGS+QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQK  SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8J1 RAB6-interacting golgin

5.5e-95

80.23

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDPSLLP                   +IEEGSLQLRK I+EN SKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANENAPNQGGS
        WEAASKVVQ+EEA KQKLC+DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS+   +   MG +QNSRV+DSSGV T+TETGAK NEN PNQ  S
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANENAPNQGGS

Query:  GEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
           PV+NGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  GEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A5D3DFA0 RAB6-interacting golgin

2.1e-110

87.98

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDPSLLPEIGPDGL REAPVIAYTEK+IEEGSLQLRK I+EN SKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANENAPNQGGS
        WEAASKVVQDEEA KQKLC+DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS+   + KAMG +QNSRV+DSS V T+TETGAK NEN PNQ  S
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANENAPNQGGS

Query:  GEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
           PV+NGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  GEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A6J1CI49 uncharacterized protein LOC111011714

2.0e-105

83.97

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Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        M S+PSLLPEIGPDGL  E+PVIAYTEK+IEE  LQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEM+TER+RAAKLKEEQAK+ 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETG--AKANENAPNQG
        WEAASKVVQDEE IKQKLC+DLNHLVQES+NSQLTRLEELKRRMEALN  RVSTSVS    +GK +G +QNSRV+DSSG PTSTETG  A+ANE+APNQG
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETG--AKANENAPNQG

Query:  --GSGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
            G  PVMNGQNQKPPSE EGRGKKKNQ HGRGKGIGAVPKGRSS +SGWTGSGFDVDGR
Subjt:  --GSGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A6J1G2D4 uncharacterized protein LOC111450054

2.0e-113

89.58

Show/hide

Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A6J1HV58 uncharacterized protein LOC111467736

7.7e-113

89.58

Show/hide

Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGL REAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ M S+QNSRVADSSGV TSTE TGAKANE+A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANENAPNQGG

Query:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        SG+ PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  SGEGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G51840.1 unknown protein

2.2e-67

59.39

Show/hide

Query:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        M SDP L  EIG DGL REAPVIAYTEK+IEE  +QLRKYIEENY+KIRDVERE  NL+ME+KLT+GPKKAA+E LRKKIE+STER+ AAKLKEE+A+K 
Subjt:  MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTET--GAKANENAPNQG
        +EAASKVV+DEEA KQ LC+DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+  V +        +   V DS+    + +T  G   N +   +G
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTET--GAKANENAPNQG

Query:  GSGEGPVMNGQNQKP-PSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
        G   G       Q+P  +E E + KKK Q  GRG+GIG + KGR     GWTG+GFDVDGR
Subjt:  GSGEGPVMNGQNQKP-PSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTCCGATCCCTCTCTTTTGCCCGAAATTGGTCCCGATGGCCTTGTCAGAGAAGCTCCTGTAATTGCCTACACCGAAAAGGTAATCGAGGAAGGCAGTCTTCAATT
GAGAAAATATATCGAAGAGAATTATTCTAAAATTCGAGATGTTGAACGAGAGTTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGACCAAAAAAAGCAGCACTTG
AACTTTTGCGGAAGAAAATAGAAATGTCAACAGAGAGAGTACGTGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAGGAC
GAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCACAGTTGACGAGACTGGAAGAACTAAAACGGCGAATGGAGGCTTT
GAATTCAAATCGAGTATCGACGTCTGTTTCTAATGTGACACAGGAAGGCAAAGCAATGGGAAGCTCTCAGAATAGCAGAGTTGCAGATTCTTCTGGAGTTCCTACATCAA
CAGAAACAGGTGCAAAAGCAAATGAAAATGCCCCTAATCAAGGAGGCAGTGGTGAAGGTCCAGTGATGAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGA
GGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCAGCAGAATCTGGCTGGACTGGCTCTGGGTTTGATGTGGATGG
TAGGACGGAGCCAGCACAGAGTCCATCCGAAGGAAGAGTAAAAGTCAGGCCATCGAAGGAGCAAGGAACTGAGGGGATTGGGCTTATGCTCAGGGTTCACCCGGTACTTC
TGGTCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGSDPSLLPEIGPDGLVREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQD
EEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANENAPNQGGSGEGPVMNGQNQKPPSETEGR
GKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRTEPAQSPSEGRVKVRPSKEQGTEGIGLMLRVHPVLLV

Lag0019963 (gene) of Sponge gourd (AG-4) v1 genome