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Lag0019972 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019972
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLysM domain-containing protein
Genome locationchr5:47114519..47114896
RNA-Seq ExpressionLag0019972
SyntenyLag0019972
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4683.19Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL
        SRT PPSSR LIDVVSWY A+ LLGLILIGSIRE+SSSSA+ DDGG MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGL
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL

Query:  VIKIISSYKPTKFKLGSET
        VIKIISS+ P   KLG +T
Subjt:  VIKIISSYKPTKFKLGSET

KGN57357.2 hypothetical protein Csa_009741 [Cucumis sativus]2.6e-4080.36Show/hide
Query:  VSISRTRPP--SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDD
        VS+ R+R P  SSRPLIDVVSWY AVGLLGLILIGSIRE+SSS       G +LR NL+T RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDD
Subjt:  VSISRTRPP--SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDD

Query:  VFPGLVIKIISS
        VFPGLVIKII+S
Subjt:  VFPGLVIKIISS

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]1.8e-4182.46Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        VSI R+R P    SSRPLIDVVSWY AVGLLGLILIGSIRE+SSSS    D G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIISS
        DDVFPGLVIKII+S
Subjt:  DDVFPGLVIKIISS

XP_022157015.1 uncharacterized protein LOC111023841 [Momordica charantia]2.0e-4076.47Show/hide
Query:  RTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
        R+  PSSRP  DVVSWY AVG+L LILIGSIRES+ S+ A DDG L  R NL+  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
Subjt:  RTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV

Query:  IKIISSYKPTKFKLGSETA
        IKIISS  P+    G ETA
Subjt:  IKIISSYKPTKFKLGSETA

XP_022985106.1 uncharacterized protein LOC111483184 [Cucurbita maxima]7.8e-4581.51Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL
        SRT PPSSR LIDVVSWY AV +LGLILIGSIRE+SSS++A DDG  MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGL
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL

Query:  VIKIISSYKPTKFKLGSET
        VIKIISS+ P   KLG +T
Subjt:  VIKIISSYKPTKFKLGSET

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein1.3e-4080.36Show/hide
Query:  VSISRTRPP--SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDD
        VS+ R+R P  SSRPLIDVVSWY AVGLLGLILIGSIRE+SSS       G +LR NL+T RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDD
Subjt:  VSISRTRPP--SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDD

Query:  VFPGLVIKIISS
        VFPGLVIKII+S
Subjt:  VFPGLVIKIISS

A0A1S3AXP2 uncharacterized protein LOC1034840368.8e-4282.46Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        VSI R+R P    SSRPLIDVVSWY AVGLLGLILIGSIRE+SSSS    D G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIISS
        DDVFPGLVIKII+S
Subjt:  DDVFPGLVIKIISS

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein8.8e-4282.46Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        VSI R+R P    SSRPLIDVVSWY AVGLLGLILIGSIRE+SSSS    D G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIISS
        DDVFPGLVIKII+S
Subjt:  DDVFPGLVIKIISS

A0A6J1DRZ3 uncharacterized protein LOC1110238419.7e-4176.47Show/hide
Query:  RTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
        R+  PSSRP  DVVSWY AVG+L LILIGSIRES+ S+ A DDG L  R NL+  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
Subjt:  RTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV

Query:  IKIISSYKPTKFKLGSETA
        IKIISS  P+    G ETA
Subjt:  IKIISSYKPTKFKLGSETA

A0A6J1J769 uncharacterized protein LOC1114831843.8e-4581.51Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL
        SRT PPSSR LIDVVSWY AV +LGLILIGSIRE+SSS++A DDG  MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGL
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL

Query:  VIKIISSYKPTKFKLGSET
        VIKIISS+ P   KLG +T
Subjt:  VIKIISSYKPTKFKLGSET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein1.9e-2048.08Show/hide
Query:  SSRPLIDVVSWYSAVGLLGLILIGS--IRESSSSSAADDDGGLMLRANLLTERP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK
        SS  + + +SWY AV    ++L+ S  + +  S+   +     M+       RP CDEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+
Subjt:  SSRPLIDVVSWYSAVGLLGLILIGS--IRESSSSSAADDDGGLMLRANLLTERP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK

Query:  IISS
        I  S
Subjt:  IISS

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein1.1e-2556.84Show/hide
Query:  DVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGL---MLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
        + V+ Y  V LL L L GS++ S+   + +   G    + R   + ERPC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Subjt:  DVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGL---MLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein2.9e-2961.46Show/hide
Query:  DVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSY
        D+ +W SAV LL LIL+ S+RE+++S++        +R +  + +PC+EIY+VGEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI   Y
Subjt:  DVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCTCTATTTCCAGAACTAGGCCACCGTCGTCCCGACCCCTAATCGACGTCGTTTCCTGGTACTCCGCCGTGGGCCTCCTGGGCCTGATTCTGATCGGCTCCAT
CCGAGAAAGCTCCTCCTCCTCCGCCGCCGACGACGACGGCGGCCTGATGCTCAGAGCGAACTTGCTGACGGAGCGCCCGTGCGATGAGATTTACGTGGTCGGAGAAGGAG
AAACGCTTCACACGATTAGCGACAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTCTTCCCGGGTTTGGTCATCAAAATTATC
TCCTCTTACAAGCCTACCAAATTCAAATTGGGATCGGAAACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTCTCTATTTCCAGAACTAGGCCACCGTCGTCCCGACCCCTAATCGACGTCGTTTCCTGGTACTCCGCCGTGGGCCTCCTGGGCCTGATTCTGATCGGCTCCAT
CCGAGAAAGCTCCTCCTCCTCCGCCGCCGACGACGACGGCGGCCTGATGCTCAGAGCGAACTTGCTGACGGAGCGCCCGTGCGATGAGATTTACGTGGTCGGAGAAGGAG
AAACGCTTCACACGATTAGCGACAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTCTTCCCGGGTTTGGTCATCAAAATTATC
TCCTCTTACAAGCCTACCAAATTCAAATTGGGATCGGAAACTGCTTGA
Protein sequenceShow/hide protein sequence
MAVSISRTRPPSSRPLIDVVSWYSAVGLLGLILIGSIRESSSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII
SSYKPTKFKLGSETA