CuGenDBv2

Gene ID	Lag0019988
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	chr5:47209267..47212564
RNA-Seq Expression	Lag0019988
Synteny	Lag0019988
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022141087.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia]

5.7e-139

89.24

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        MT +ILS NPLIRLTSTPRFRAK+R K+ A+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA  TPAQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LG+SLAAFSI+LPYLGKFLKGAVPSGEA+LPEG EQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDI GADL+AWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL
        LQSIGLSALND LYFPQIS+SELW+MLP GTRSVLVQPV    ++SGN+MEKIGGFILLASSLSYAFSDKDRAWI+ALA+KF DRDIL
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL

XP_022945332.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata]

1.1e-137

88.5

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

XP_022968386.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima]

1.8e-137

88.85

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

XP_022968395.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima]

1.8e-137

88.85

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

6.2e-138

88.85

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+ST RFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDISG DLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.4e-135

87.5

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M S+I S +PL +LTS   FRAKS+ K+ AISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  TPAQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFLKGAVPSGEATLPEG EQIF+LSQ VSDN+KED+AWATYILLRNTNSISVLIQ +G LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL
        LQSIGLSAL D++YFPQISES LWQMLPKGTRSVLVQPVVQNL++SGNEMEK+GGFILLASSLSYAFSDKDRAWI+ALA+KFDDR IL
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

2.7e-139

89.24

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        MT +ILS NPLIRLTSTPRFRAK+R K+ A+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA  TPAQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LG+SLAAFSI+LPYLGKFLKGAVPSGEA+LPEG EQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDI GADL+AWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL
        LQSIGLSALND LYFPQIS+SELW+MLP GTRSVLVQPV    ++SGN+MEKIGGFILLASSLSYAFSDKDRAWI+ALA+KF DRDIL
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

5.2e-138

88.5

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

A0A6J1HX31 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

8.8e-138

88.85

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

A0A6J1HXW3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

8.8e-138

88.85

Show/hide

Query:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA
        M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEA
Subjt:  MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEA

Query:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSI+LPYLGKFL+GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI
        LQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Subjt:  LQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

3.9e-82

57.78

Show/hide

Query:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP
        P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LP
Subjt:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP

Query:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL
        Y+GKFLKG+V   + +LPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L  WF++++  IGL+ + ++L
Subjt:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL

Query:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF
        YFPQ + S L   +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

2.7e-83

57.78

Show/hide

Query:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP
        P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LP
Subjt:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP

Query:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL
        Y+GKFLKG+V   + +LPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L  WF++++  IGL+ + ++L
Subjt:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL

Query:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF
        YFPQ + S L   +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF

AT5G52110.2 Protein of unknown function (DUF2930)

2.7e-83

57.78

Show/hide

Query:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP
        P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LP
Subjt:  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLP

Query:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL
        Y+GKFLKG+V   + +LPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L  WF++++  IGL+ + ++L
Subjt:  YLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSL

Query:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF
        YFPQ + S L   +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACCAGCACAATTCTCTCTACCAACCCGTTAATTCGGTTGACATCTACTCCCCGATTTCGCGCTAAAAGTAGGTGGAAGAGTGCAGCAATTTCTGCTCGTCTTGACGA
TTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGCTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTG
GTTCACTTCTTCTTTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTTCCGTCACCCCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATT
TCACTTCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCTGAGCAAATATTTGTCTTGTCACAAAATGTATCCGATAA
TGTGAAGGAAGACTTGGCTTGGGCAACTTACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTAGAGGGGAGTTATGTGTTCGAGGATACTGGAATA
GTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTGTCTGCATTGAATGATTCCCTCTATTTTCCTCAGATTTCAGAA
TCTGAACTTTGGCAAATGCTGCCCAAGGGCACTCGCTCAGTTTTGGTACAGCCGGTGGTTCAAAATTTAAGGCGAAGTGGCAATGAGATGGAAAAGATTGGAGGATTCAT
ATTGCTGGCTTCAAGTCTAAGTTATGCGTTTAGCGATAAAGATAGAGCCTGGATTAAAGCTCTTGCTAGCAAATTTGACGATAGAGACATACTCTGA

mRNA sequence

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Protein sequence

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MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSI
SLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISE
SELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL

Lag0019988 (gene) of Sponge gourd (AG-4) v1 genome