CuGenDBv2

Gene ID	Lag0020019
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA-directed RNA polymerase III subunit RPC3
Genome location	chr5:47415892..47422129
RNA-Seq Expression	Lag0020019
Synteny	Lag0020019
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR008806 - RNA polymerase III Rpc82, C -terminal IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix IPR036388 - Winged helix-like DNA-binding domain superfamily IPR039748 - DNA-directed RNA polymerase III subunit RPC3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574180.1 DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-273

92.73

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Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRPIPDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD + +QES DAD IILWRANFDEFIRCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

XP_022945853.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata]

2.4e-273

92.54

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Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRPIPDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD +++QES DAD IILWRANFDEF+RCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

XP_022968436.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita maxima]

2.0e-272

92.54

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRPIPDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD +++QES DAD IILWRANFDEFIRCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPR+SLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

XP_023541704.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo]

1.2e-272

92.35

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Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRP PDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD +++QES DAD IILWRANFDEFIRCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]

1.2e-264

89.67

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTEL+SSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSN+LHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKL KDK+CEELLEGLLQNGRLSMEQMVERA+S     NRPIPD+VHDSLFKLLNAHFVERCPAPEP+LSP+ EEQPPP+KRGAKAAKISEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQR+VE+ARPMEVLRFS+G+TNTEAEKSEHYS ISGQ KRK  D E+VQ+S DAD++ILWRANFDEFIRCLRHKAC+EHV+SQFDDGVVNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLS+LGC GMDDY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME++KELL+LPPD R  PL KR++RL+
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
         VR LL+SSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC3

1.5e-249

85.66

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLRKGPLTLRLLIRFTEL+ SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KF+AIAS+KL +DKNC+ELLEGLLQNGRLSMEQ+VERA+S     N PI DVVHDSLFKLLNAHFVERCPAPEPTLSP+ EE PPPRKRGAKAAKISEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRL+EAARP+EVLRFS+G+TN EAEKSEH+S ISGQ KRK  D E+ Q+S DAD  ILWRAN+DEFIRCLRHKAC+EHV+SQFDDGVVNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC GMDDY INL++IIEQAQ DEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+E++KELL+LP D    PL K+ +   
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVR LL SSL+KLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC3

1.9e-252

86.23

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLRKGPLTLRLLIRFTEL+ SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIAS+KL +DKNC+ELLEGLLQNGRLSMEQMVERA+S     NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSP+ EEQPPPRKRGAKAAKI EVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRL+EAARP+EVLRFS+G+TN EAEKSEHYS ISGQ KRK  + E+ Q+S  AD  ILWRAN+DEFIRCLRHKACVEHV+SQFDDGVVNVLSA LE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC GMDDY INL++I+EQAQ DEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDS+FVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+E++KELL+LP D    PL K+ +   
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
         VR LL SSL+KLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

A0A6J1CHB3 DNA-directed RNA polymerase III subunit RPC3

2.1e-262

90.44

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQ GIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTEL+SSQVNNSLLILIQHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLA+ASEKLEKDKNCEELLEGLLQNGRLSMEQ+VERAKS     NRPIPDVVH+SLFKLL AHFVERCPAPEP LS Q EEQPPP+KRGAKAAKISEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLV  ARPMEVLRFS+ ETNTEAEKSE   PISGQ KRK  + E VQES DAD IILWRANFDEFIRCLRHKAC+EHV+SQFDDGVVNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GMDDY INL+KIIEQAQI+EVES+VLKRYGRDAYRMFRFLS+TGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL+LPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC3

1.2e-273

92.54

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRPIPDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD +++QES DAD IILWRANFDEF+RCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

A0A6J1HUV1 DNA-directed RNA polymerase III subunit RPC3

9.9e-273

92.54

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTELSSSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP
        KFLAIASEKLEKDK+CEELLEGLLQNGRLSMEQ++ERAKS     NRPIPDVV++SL KLLNAHFVERCPAPEPTLSPQ EEQPPPRKRGAKAAK+SEVP
Subjt:  KFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR----NRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVP

Query:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
         TLEQRLVE+ARPMEV+RFSIGETNTEAE+SEHYS ISGQ KRKRGD +++QES DAD IILWRANFDEFIRCLRHKAC+EHV+SQFDDG VNVLSAILE
Subjt:  ATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMTLDRVEASLSALGCSGM+DY INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
        KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPR+SLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR
Subjt:  KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLR

Query:  NVRILLESSLLKLDDALMLFHNF
        NVRILLESSLLKLDDALMLFH+F
Subjt:  NVRILLESSLLKLDDALMLFHNF

SwissProt top hits

e value

%identity

Alignment

Q2TBL4 DNA-directed RNA polymerase III subunit RPC3

6.4e-27

26.41

Show/hide

Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  S  QV  +L +LIQHN V          +    +   +Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE
        +  A + L  D   E ++E LL NG+++M  +V++   R    + D        V ++  +L++ HFV+RCP    T    ++  PPP    A    +SE
Subjt:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE

Query:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI
            L  +L             IG+        E     +G+ K KR  +    +    D+ I W+AN D F +  R +A V  V ++ D     ++  +
Subjt:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI

Query:  LEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFR
        L   R SE    +    T PLS + I+        + K  + + +TL  D     +   G SG   Y INL K +       +ESVV +R+G    R+FR
Subjt:  LEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFR

Query:  FLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
         + +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Subjt:  FLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL

Q55FJ5 DNA-directed RNA polymerase III subunit rpc3

5.6e-15

20.15

Show/hide

Query:  YGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LSSSQVNNSLLILIQHNCV---QAFTAVTEGEF-----GDAPKADTQYLALFSNI
        Y  K A+ I+   FG+ V KV E L+++G  + +++ +       L+  ++   LL+LIQHN V   +    +T+ E      G+   +D+ Y A+  N 
Subjt:  YGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LSSSQVNNSLLILIQHNCV---QAFTAVTEGEF-----GDAPKADTQYLALFSNI

Query:  LHRMRFSKFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSRNR--------PIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEE--QPPPR
        +HR+RF KF+     K  K      +LE L+ +GRL M+ ++++A    R         I     D+  KL+   F+ R P P P    +         +
Subjt:  LHRMRFSKFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSRNR--------PIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEE--QPPPR

Query:  KRGAKAAKISEVPATLEQ-------------------RLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKK--------------------RKRGDR
        K G   A  + V A  ++                    +  +A   E L    G+++T    S+   P  G  K                    RKR  R
Subjt:  KRGAKAAKISEVPATLEQ-------------------RLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKK--------------------RKRGDR

Query:  EVVQESEDA-----------------------------------------------------------------------DNIILWRANFDEFIRCLRHK
        ++  E +D                                                                        ++ +LW  N+++FI   + K
Subjt:  EVVQESEDA-----------------------------------------------------------------------DNIILWRANFDEFIRCLRHK

Query:  ACVEHVKSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSAL------------------GCSGMDDYTIN
        AC + V  + +     + +A+++  + S +  +  +T  +  +NI EE  ++ +  + M   ++E  LS +                    S +  Y +N
Subjt:  ACVEHVKSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSAL------------------GCSGMDDYTIN

Query:  LKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS------LCLLWRVDRYNLW
        +  II   +   VES++ +++G +  R+F+ L     L+E ++I++ A +  NE   +L+ + +   + +++    +PR S         L+ VD   + 
Subjt:  LKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS------LCLLWRVDRYNLW

Query:  EHVLDEMYHASLNLQLRQAYEMEQDKE----LLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHNF
            ++++ A  N + R   E+E  K+    L  L  D+      K Y +   +   L + +L LD+ L+  ++F
Subjt:  EHVLDEMYHASLNLQLRQAYEMEQDKE----LLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHNF

Q5XIL3 DNA-directed RNA polymerase III subunit RPC3

3.5e-25

25.81

Show/hide

Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ S  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE
          I + K       E ++E LL NG+++M  +V++   R    + D        V ++  +L + HFV+RCP     L P  +   P     A    I+E
Subjt:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE

Query:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI
            L  +L             IG+        E     +G+ K K+  R    E    D+ I W+ N D F +  R +A V  V ++ D     ++  +
Subjt:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI

Query:  LEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFR
        L   R SE    +    T PLS + I+        + K  + + +TL  D     +   G SG   Y INL K +       +ESV+ +R+G    R+FR
Subjt:  LEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFR

Query:  FLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
         + +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Subjt:  FLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL

Q9BUI4 DNA-directed RNA polymerase III subunit RPC3

5.8e-28

26.56

Show/hide

Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  S  QV  +L +L+QHN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE
        +   ++ L  D   E ++E LL NG+L+M  +V++   R    + D        V ++  +L + HFV+RCP+  PT        PPP    A    I+E
Subjt:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE

Query:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFD---DGVVNVL
            L  +L             IG+        E     +G+ K KR       +    D+ I W+AN D F +  R +A V  V ++ D     +V  +
Subjt:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFD---DGVVNVL

Query:  SAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMF
          + E T SS        T PLS + I+        + K  + + +TL  D     +   G SG   Y INL K +       +ESVV +R+G    R+F
Subjt:  SAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMF

Query:  RFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
        R + +    +E +++ D A +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Subjt:  RFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL

Q9D483 DNA-directed RNA polymerase III subunit RPC3

6.0e-25

25.3

Show/hide

Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ S  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE
          I + K       E ++E LL NG+++M  +V++   R    + D        V ++  +L + HFV+RCP    T S  ++  PPP    A    I+E
Subjt:  LAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSR-NRPIPD-------VVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISE

Query:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI
            L  +L             IG+        E     +G+ K K+  R    +    D+ I W+ N D F +  R +A V  V ++ D     ++  +
Subjt:  VPATLEQRLVEAARPMEVLRFSIGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAI

Query:  LEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
        L  +  +        T PLS + I+        + K  + + +TL  D     +   G SG   + INL K +       +ESV+ +R+G    R+FR +
Subjt:  LEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
         +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL

Arabidopsis top hits

e value

%identity

Alignment

AT3G49000.1 RNA polymerase III subunit RPC82 family protein

1.0e-128

47.38

Show/hide

Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMR
        M M+++GI YA+HIIT  FG++V+KVCE LLRKGPL+ R + R  E  ++ ++V + L +LIQHNCVQAF+   E   G   KA  QY+ LF+NILHR+R
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMR

Query:  FSKFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSRNRPI-PDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVPA
        ++KF  I +E+L  D  C  +L+GLL NGRL++ Q +ER +     I  + + DSL KL+ A FVER P+PEP L    +E+ P ++RGAKAAKI + P 
Subjt:  FSKFLAIASEKLEKDKNCEELLEGLLQNGRLSMEQMVERAKSRNRPI-PDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVPA

Query:  TLEQRLVEAARPMEVLRFS-IGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE
        TLE+++VEAA P++ +RF  I E ++ +  ++  S I+  K+++R       ++ D+ + ++WR NF+EFI  LRHKACVE VK + D+G   VL A+LE
Subjt:  TLEQRLVEAARPMEVLRFS-IGETNTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM----------DDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
          RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L  +            D Y ++ K II  AQ DE+E+VV++RYG++A+RMFR+L
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGM----------DDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRG
        S+ G  VET+KI+D+A  +K + P+ L ++WKD YL+M+K+A+T P  ++  LLW+V++  +   +LDEMYHASLNL LR A+E+E +KELL LP DK  
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRG

Query:  GPLEKRYNRLRNVRILLESSLLKLDDALMLFHNF
        GPL++R  +++  R+LL S++ KLDDA+MLFH+F
Subjt:  GPLEKRYNRLRNVRILLESSLLKLDDALMLFHNF

Sequences

Show/hide sequences

CDS sequence

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ATGGTGATGACTCAGTACGGCATCAAATATGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTTGCGAAAGTCTGCGAAACCCTGCTCCGGAAGGGGCCTCTGAC
GTTGAGACTTCTCATACGATTCACGGAACTTAGCTCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAACTGCGTCCAAGCCTTCACTGCAGTGACAGAAG
GTGAGTTTGGAGACGCACCCAAGGCTGACACACAATACTTGGCGTTGTTTAGTAACATACTTCATCGTATGAGATTTTCCAAATTCCTTGCAATTGCCTCGGAAAAGCTT
GAGAAAGATAAAAATTGTGAAGAACTTCTCGAGGGTCTGCTGCAGAATGGTAGGCTTTCAATGGAACAAATGGTTGAAAGAGCAAAGTCAAGAAACCGTCCAATTCCAGA
TGTTGTACATGACAGTCTATTTAAACTTTTGAATGCCCATTTTGTCGAACGTTGTCCAGCCCCTGAACCAACTCTTTCACCCCAAGCTGAAGAACAGCCTCCTCCTAGAA
AAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTGCCAGCAACCTTAGAGCAGCGTCTTGTAGAAGCAGCCCGTCCAATGGAAGTTCTAAGATTTTCAATTGGTGAAACC
AACACAGAAGCTGAAAAGAGTGAACATTATTCACCAATTTCTGGACAGAAGAAGCGCAAGCGTGGTGATCGGGAGGTGGTACAAGAGTCTGAAGATGCAGATAATATTAT
TCTTTGGCGTGCCAACTTTGATGAGTTCATAAGATGTCTTAGACATAAGGCTTGCGTTGAACATGTCAAATCACAGTTTGATGACGGAGTGGTAAATGTCTTGAGTGCCA
TTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTATCATTGGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGTAGT
ATGACCTTAGATCGGGTTGAAGCTTCCCTCTCTGCACTGGGTTGTTCAGGGATGGATGATTATACAATTAATTTAAAGAAGATCATCGAACAAGCTCAAATTGATGAGGT
TGAATCAGTTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAATGTTCAGATTCCTGTCAAAAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCTGATAGTGCATTTG
TCGATAAGAATGAGGCACCTAAAATTTTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGAAAGTAGCTATAACAGTACCTAGACATTCCCTATGCTTGTTGTGG
AGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTACCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGCTTCT
GAATCTTCCACCAGACAAGCGCGGTGGACCGCTCGAGAAAAGATATAATCGTCTGAGAAATGTCAGGATACTCCTGGAGTCGTCGCTGCTGAAGCTCGACGATGCTCTAA
TGCTTTTCCATAACTTCTAA

mRNA sequence

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Protein sequence

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MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELSSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKL
EKDKNCEELLEGLLQNGRLSMEQMVERAKSRNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPQAEEQPPPRKRGAKAAKISEVPATLEQRLVEAARPMEVLRFSIGET
NTEAEKSEHYSPISGQKKRKRGDREVVQESEDADNIILWRANFDEFIRCLRHKACVEHVKSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRS
MTLDRVEASLSALGCSGMDDYTINLKKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLW
RVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHNF

Lag0020019 (gene) of Sponge gourd (AG-4) v1 genome