CuGenDBv2

Gene ID	Lag0020061
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Protein of unknown function (DUF3464)
Genome location	chr5:47776403..47776975
RNA-Seq Expression	Lag0020061
Synteny	Lag0020061
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574203.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-80

83.77

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKD-DGGDYDDEIPEAVAKRIITRI
        MK LVCSFR AL LSKPPPWKQRSRI+DST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +K SGQN+S+D  GGD DDEIPEAVAKRIITRI
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKD-DGGDYDDEIPEAVAKRIITRI

Query:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        LAFVGIPMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR GN
Subjt:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

KAG7013265.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.0e-81

84.21

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR ALDLSKPPPWKQRSRI+DST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +K SGQN+S+D GG  DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVGIPMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR GN
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]

7.9e-81

83.68

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR AL LSKPPPWKQRSRI+DST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +K SGQN+S+D GGD DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVG+PMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR GN
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

XP_022968628.1 uncharacterized protein PAM68-like [Cucurbita maxima]

2.5e-79

83.68

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR ALDLSKPPPWKQRSRI++ST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +KLS QN+S+ DGGD DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVGIPMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR G+
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]

4.6e-81

83.16

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR ALDLSKPPPWKQRSRI+DST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +K SGQN+S+  GG  DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVG+PMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR GN
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZ57 uncharacterized protein PAM68-like

7.2e-72

77.13

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Query:  MKTLVCSFRQALDLSKPPPWKQRS-RINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRI
        MK+  CSFRQAL L KPPP  QR+  INDST+TKNLSNFT TSR Q+Q+NAKGFTGS ATAK+RETAA+ LSGQN+++DD    DDEIPEAV  RIITRI
Subjt:  MKTLVCSFRQALDLSKPPPWKQRS-RINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRI

Query:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR
        LAFVGIPMAFGVTLLKIF+AIK QNLWDVPIW+PF T FLTFGASTMGIAYGTLS SLDPEK+G++ GWE+ +KNWVEMWKEEDE +R
Subjt:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

7.2e-72

77.13

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Query:  MKTLVCSFRQALDLSKPPPWKQRS-RINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRI
        MK+  CSFRQAL L KPPP  QR+  INDST+TKNLSNFT TSR Q+Q+NAKGFTGS ATAK+RETAA+ LSGQN+++DD    DDEIPEAV  RIITRI
Subjt:  MKTLVCSFRQALDLSKPPPWKQRS-RINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRI

Query:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR
        LAFVGIPMAFGVTLLKIF+AIK QNLWDVPIW+PF T FLTFGASTMGIAYGTLS SLDPEK+G++ GWE+ +KNWVEMWKEEDE +R
Subjt:  LAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR

A0A6J1CGP3 uncharacterized protein PAM68-like

1.5e-72

74.87

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK L+CS+RQAL LS+PPPWK RSRINDST+TKNL+N +  +R  +++NAKGFTG+ ATAK+RE AA K+SGQN+S +D    DDEI EAV+ RIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR
        AFVG+PMAFGV LLKIFE IK Q +WDVPIWLPFLT FLTFGAST+GIAYGTLSASLDPEKEG+LFGWE+ +KNWVEMWKEEDEA+R
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANR

A0A6J1FZC0 uncharacterized protein PAM68-like

3.8e-81

83.68

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR AL LSKPPPWKQRSRI+DST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +K SGQN+S+D GGD DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVG+PMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR GN
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

A0A6J1HYL3 uncharacterized protein PAM68-like

1.2e-79

83.68

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        MK LVCSFR ALDLSKPPPWKQRSRI++ST TKNL  FT TSR QIQLNAKGFTGS ATAKDRETA +KLS QN+S+ DGGD DDEIPEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN
        AFVGIPMAFGVTL+KI EA+  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ +KNWVEMWKEEDEANR G+
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

2.9e-17

32.57

Show/hide

Query:  RINDSTLTKNLSNFTITSRRQIQLNA---------KGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDE----------IPEAVAKRIITRILAFVGI
        R+ D T ++   + T  +R +I   A         KGF       K +++   K   Q+   DD  D DD+          IPE V  R+I+R+   VG+
Subjt:  RINDSTLTKNLSNFTITSRRQIQLNA---------KGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDE----------IPEAVAKRIITRILAFVGI

Query:  PMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWK
        P+  G+     F  +KV    DVP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW + +KNW   W+
Subjt:  PMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

3.7e-25

36.81

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        M+ L+CS R         P    SR    T + N         + +  N K    S   A  +   + + S +    D   + D  IP+ V +R++ RI+
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEE
          VG P+  GV +LK+ E +K +N+WDVP+W+P+LT  +TFG+S +GIAYG+LS +LDP K  +LFG ++ ++NWVEMWKE+
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

2.0e-18

32.57

Show/hide

Query:  RINDSTLTKNLSNFTITSRRQIQLNA---------KGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDE----------IPEAVAKRIITRILAFVGI
        R+ D T ++   + T  +R +I   A         KGF       K +++   K   Q+   DD  D DD+          IPE V  R+I+R+   VG+
Subjt:  RINDSTLTKNLSNFTITSRRQIQLNA---------KGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDE----------IPEAVAKRIITRILAFVGI

Query:  PMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWK
        P+  G+     F  +KV    DVP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW + +KNW   W+
Subjt:  PMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

2.7e-26

36.81

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Query:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL
        M+ L+CS R         P    SR    T + N         + +  N K    S   A  +   + + S +    D   + D  IP+ V +R++ RI+
Subjt:  MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEE
          VG P+  GV +LK+ E +K +N+WDVP+W+P+LT  +TFG+S +GIAYG+LS +LDP K  +LFG ++ ++NWVEMWKE+
Subjt:  AFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEE

Sequences

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CDS sequence

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ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAAGCCTCCGCCATGGAAACAGAGAAGCCGAATCAACGACTCAACACTCACAAAGAATCTCAGCAA
TTTCACGATAACATCCAGACGCCAAATCCAACTAAACGCCAAGGGCTTCACAGGTTCTTCGGCGACGGCGAAAGACAGAGAAACCGCCGCGGAAAAACTTTCAGGCCAAA
ACAGTAGCAAAGATGACGGGGGCGACTACGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGT
GTGACGTTGCTGAAGATTTTCGAGGCGATCAAGGTGCAGAACCTGTGGGATGTGCCGATCTGGCTGCCATTTTTGACGATTTTTTTGACATTTGGAGCTTCGACGATGGG
AATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGAACAGGTGGAGAAGAATTGGGTAGAGATGTGGAAGGAGGAAGATG
AAGCCAATCGCCGAGGAAACTGA

mRNA sequence

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Protein sequence

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MKTLVCSFRQALDLSKPPPWKQRSRINDSTLTKNLSNFTITSRRQIQLNAKGFTGSSATAKDRETAAEKLSGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFG
VTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVEKNWVEMWKEEDEANRRGN

Lag0020061 (gene) of Sponge gourd (AG-4) v1 genome