; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationchr5:48375905..48376973
RNA-Seq ExpressionLag0020138
SyntenyLag0020138
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2291.94Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPT SVASDGE KWEFSCD EVDYESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
XP_008466840.1 PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]2.2e-2288.71Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]2.6e-2395.16Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
XP_022945934.1 uncharacterized protein LOC111450028 [Cucurbita moschata]4.4e-2395.16Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]2.0e-2393.55Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M+VSDGKLS+
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
TrEMBL top hitse value%identityAlignment
A0A1S3CTG0 uncharacterized protein LOC1035041461.1e-2288.71Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc11.1e-2288.71Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
A0A6J1CHJ5 uncharacterized protein LOC1110115641.3e-2395.16Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
A0A6J1G2C3 uncharacterized protein LOC1114500282.1e-2395.16Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
A0A6J1HX84 uncharacterized protein LOC111467483 isoform X21.4e-2293.55Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKR MTVSDGKLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein1.3e-1253.23Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV
        MA T    +  +  W+FSC+ +V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLSV
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTCGAAGTCGATTATGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTTAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTGTTAGCCTCTCTTGCTCTTTGGATTCCCAGTTTTG
AATGTACTTTTGAGTTTTGTTTGTATATAGATACCACAATAGCTCATTACAGGGTTCTTTGGAACATTAGTACTGCTGCTGCATTCGATCATATTTTGGAATTCTCATTA
GCTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTCGAAGTCGATTATGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTTAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTGTTAGCCTCTCTTGCTCTTTGGATTCCCAGTTTTG
AATGTACTTTTGAGTTTTGTTTGTATATAGATACCACAATAGCTCATTACAGGGTTCTTTGGAACATTAGTACTGCTGCTGCATTCGATCATATTTTGGAATTCTCATTA
GCTGCCTGA
Protein sequenceShow/hide protein sequence
MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVLASLALWIPSFECTFEFCLYIDTTIAHYRVLWNISTAAAFDHILEFSL
AA