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Lag0020143 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020143
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:48397977..48398550
RNA-Seq ExpressionLag0020143
SyntenyLag0020143
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013312.1 hypothetical protein SDJN02_26071, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1170.69Show/hide
Query:  EFEDFNTRMNLDHSPNK-----DGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK
        EF   NT+MNL+HSPNK     DGFQM+MRKLL+V RPDYDDPV N  HEPQKP TGK
Subjt:  EFEDFNTRMNLDHSPNK-----DGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK

PNT08961.1 hypothetical protein POPTR_012G017400 [Populus trichocarpa]5.7e-0650.72Show/hide
Query:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQ-KPGTG
        TFL++ LL L   SS   E F+  MN   S +KDG Q+  RKLL+VD  DYDD  ANR+H+P+ +PG G
Subjt:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQ-KPGTG

XP_022945271.1 uncharacterized protein LOC111449569 [Cucurbita moschata]2.0e-0678.95Show/hide
Query:  NKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK
        ++DGFQM+MRKLL+V RPDYDDPV N  HEPQKPGTGK
Subjt:  NKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK

XP_025014387.1 uncharacterized protein LOC112535876 [Ricinus communis]3.1e-0448.57Show/hide
Query:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGKP
        T L+L LL L  FSS   E F   MN +HS +KD FQM   + L+++  DYDD   N KH+P+K G GKP
Subjt:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGKP

TrEMBL top hitse value%identityAlignment
A0A2N9IUT5 Uncharacterized protein5.8e-0448.65Show/hide
Query:  KTSTFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMV-DRPDYDDPVANRKHEP-QKPGTGK
        K  TFL+L+L+ L   S    E F   MN +HS  KDG ++ +RKLL V    DYDD  AN KH+P +KPG GK
Subjt:  KTSTFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMV-DRPDYDDPVANRKHEP-QKPGTGK

A0A6J1G0E0 uncharacterized protein LOC1114495699.5e-0778.95Show/hide
Query:  NKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK
        ++DGFQM+MRKLL+V RPDYDDPV N  HEPQKPGTGK
Subjt:  NKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGK

B9I1Y0 Uncharacterized protein2.8e-0650.72Show/hide
Query:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQ-KPGTG
        TFL++ LL L   SS   E F+  MN   S +KDG Q+  RKLL+VD  DYDD  ANR+H+P+ +PG G
Subjt:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQ-KPGTG

B9SJU3 Uncharacterized protein1.5e-0448.57Show/hide
Query:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGKP
        T L+L LL L  FSS   E F   MN +HS +KD FQM   + L+++  DYDD   N KH+P+K G GKP
Subjt:  TFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAACCTCTACCTTTCTCATTCTTATACTCCTTTTCCTCTGTTCCTTCTCTTCGGCAGAGTTTGAGGACTTCAATACTAGGATGAATCTTGATCACTCTCC
TAACAAGGATGGATTCCAAATGAAGATGAGGAAGCTTTTGATGGTTGACAGACCAGATTATGATGATCCTGTAGCTAACCGTAAGCATGAGCCTCAGAAACCTGGCACTG
GGAAGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAACCTCTACCTTTCTCATTCTTATACTCCTTTTCCTCTGTTCCTTCTCTTCGGCAGAGTTTGAGGACTTCAATACTAGGATGAATCTTGATCACTCTCC
TAACAAGGATGGATTCCAAATGAAGATGAGGAAGCTTTTGATGGTTGACAGACCAGATTATGATGATCCTGTAGCTAACCGTAAGCATGAGCCTCAGAAACCTGGCACTG
GGAAGCCATAG
Protein sequenceShow/hide protein sequence
MASKTSTFLILILLFLCSFSSAEFEDFNTRMNLDHSPNKDGFQMKMRKLLMVDRPDYDDPVANRKHEPQKPGTGKP