; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020149 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020149
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-binding family protein isoform 2
Genome locationchr5:48432959..48435303
RNA-Seq ExpressionLag0020149
SyntenyLag0020149
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455996.1 PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo]1.2e-10385.33Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVP VVGKRPRVDYDTTG HELPNYYPRQDDRPVLQGIKSVDSINESYERYLR+SQISSY GGQSARPVGGGVPGH +N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  WGVRHVWHSLVENKVQDGRTAGWES
        +         V  ++Q  R  G  S
Subjt:  WGVRHVWHSLVENKVQDGRTAGWES

XP_023553422.1 RNA-binding protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]2.0e-10384.51Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNE-PP
        MSDAYWRYSDSQQQPPSSVP+V GKRPRVDYDT+G H+LPNYYPRQDDRP+LQGIKSVDSINESYERYLRS++ISSY GGQSARPVGGGVPGHS+N+ PP
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNE-PP

Query:  IVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
        IVGIGGV+SGANVNDRS SFGGGRPNVPLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
Subjt:  IVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

Query:  GWGVRHVWHSLVENKVQDGRTAGWES
        G+         V  ++Q  R  G  S
Subjt:  GWGVRHVWHSLVENKVQDGRTAGWES

XP_038897625.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]2.8e-10586.67Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVPAVVGKRPRVDYD TG HELPNYY RQDDRPVLQGIKSVDSINESYERYLRSSQISSY GGQSARPVGGGVPGHS+N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  WGVRHVWHSLVENKVQDGRTAGWES
        +         V  ++Q  R  G  S
Subjt:  WGVRHVWHSLVENKVQDGRTAGWES

XP_038897633.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]8.9e-10494.97Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVPAVVGKRPRVDYD TG HELPNYY RQDDRPVLQGIKSVDSINESYERYLRSSQISSY GGQSARPVGGGVPGHS+N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

XP_038897644.1 RNA-binding protein 2-like isoform X3 [Benincasa hispida]8.9e-10494.97Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVPAVVGKRPRVDYD TG HELPNYY RQDDRPVLQGIKSVDSINESYERYLRSSQISSY GGQSARPVGGGVPGHS+N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

TrEMBL top hitse value%identityAlignment
A0A0A0L796 RRM domain-containing protein3.7e-10384.44Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVP VVGKRPRVDYDT+G HELPNYYPRQDDRPVLQGIKSVDSINESYERYLR+SQISSY GGQSARPVGGGVPGH +N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +G+GGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  WGVRHVWHSLVENKVQDGRTAGWES
        +         V  ++Q  R  G  S
Subjt:  WGVRHVWHSLVENKVQDGRTAGWES

A0A1S3C3F7 RNA-binding protein 2-like isoform X25.6e-10485.33Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVP VVGKRPRVDYDTTG HELPNYYPRQDDRPVLQGIKSVDSINESYERYLR+SQISSY GGQSARPVGGGVPGH +N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  WGVRHVWHSLVENKVQDGRTAGWES
        +         V  ++Q  R  G  S
Subjt:  WGVRHVWHSLVENKVQDGRTAGWES

A0A1S4E1R0 RNA-binding protein 2-like isoform X53.7e-10393.5Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVP VVGKRPRVDYDTTG HELPNYYPRQDDRPVLQGIKSVDSINESYERYLR+SQISSY GGQSARPVGGGVPGH +N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

A0A5D3CIZ5 RNA-binding protein 2-like isoform X43.7e-10393.5Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        MSDAYWRY+DSQQQPPSSVP VVGKRPRVDYDTTG HELPNYYPRQDDRPVLQGIKSVDSINESYERYLR+SQISSY GGQSARPVGGGVPGH +N+PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGV+SGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

A0A6J1E554 RNA-binding protein 2-like isoform X21.6e-10384.51Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNE-PP
        MSDAYWRYSDSQQQPPSSVP+V GKRPRVDYDT+G H+LP+YYPRQDDRP+LQGIKSVDSINESYERYLRSS+ISSY GGQSARPVGGGVPGHS+N+ PP
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNE-PP

Query:  IVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
        IVGIGGV+SGANVNDRS SFGGGRPNVPLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
Subjt:  IVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

Query:  GWGVRHVWHSLVENKVQDGRTAGWES
        G+         V  ++Q  R  G  S
Subjt:  GWGVRHVWHSLVENKVQDGRTAGWES

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A7.7e-3446.01Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSV
        M+D YW     Q  PP        KRPR D++      T GH    YYPR +D  V        +I  +Y+RYL+S Q S  GG  S    GGG  G   
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSV

Query:  NEPPI----VGIGGVIS-GANVNDRSTSFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP
        N   I    +  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +P
Subjt:  NEPPI----VGIGGVIS-GANVNDRSTSFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP

Query:  AHAATAMDALQGW
        A AATA+ ALQG+
Subjt:  AHAATAMDALQGW

F4HWF9 Nuclear speckle RNA-binding protein B2.0e-2943.96Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG----------GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG------
        ++ +Y  + +DR +   +K   SI  +Y+RYL+S Q + +   + A P  G           +PG S+ E  + G GG + S    N R   FG      
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG----------GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG------

Query:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGW
          GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S++   DP VL FVDF + A AATA+ ALQ +
Subjt:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGW

G7ID19 RNA-binding protein 21.9e-4041.43Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQS--------ARPVG
        M+D +W        PP  +     KRPR +YDT     T G+E+ NY  + +   +L   K + S   +Y+R+L+S+ ++S+  G++        AR V 
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQS--------ARPVG

Query:  GGVPGHSVNEPPIVG-IGGVISGANV--NDRSTSFGG----------GRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPG
        G +PGHS+ +P  +G + GV  G ++  N R  +FGG          G   +PLP DAS+TL+VEGLPS  T+REVAHIFRPFVGY+EVRLV KES++ G
Subjt:  GGVPGHSVNEPPIVG-IGGVISGANV--NDRSTSFGG----------GRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPG

Query:  RDPVVLGFVDFVSPAHAATAMDALQGWGVRHVWHSLVENKVQDGRTAGWES
         DP++L FVDF +PA AATA+ ALQG+ V  +       ++Q  R+ G  S
Subjt:  RDPVVLGFVDFVSPAHAATAMDALQGWGVRHVWHSLVENKVQDGRTAGWES

Q6JB11 Protein MATERNALLY EXPRESSED GENE 54.4e-2958.72Show/hide
Query:  GHSVNEPPIVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHA
        G+ V+   ++G+ G      ++ R   + GGRP  PLPPDAS+TL++EGLP++CTRREV+HIFRPFVG++EVRLVNKESR+PG DP VL FVDF +PA A
Subjt:  GHSVNEPPIVGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHA

Query:  ATAMDALQG
          A++ALQG
Subjt:  ATAMDALQG

Q8H0P8 RNA-binding protein 11.2e-3443.53Show/hide
Query:  MSDAYWRYSDSQQQPPSSVP-AVVGKRPRVDYD-----TTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVG-------
        M+D YW    ++QQ  S +P + + KRPR DY+        G+E+ +Y  R++DR     +K   +I  +Y+RYL+  Q+ S+  G+ A  VG       
Subjt:  MSDAYWRYSDSQQQPPSSVP-AVVGKRPRVDYD-----TTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVG-------

Query:  -GGVPGHSVNEPP--IVGIGGVISGANVNDRSTSFGGGRPNVP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPG
         GG+P HS+++P   I   GG       N R  ++G   P  P          LPPDAS TL++EGLPS CTRREVAHIFRPFVGY+EVRLV+KE+++ G
Subjt:  -GGVPGHSVNEPP--IVGIGGVISGANVNDRSTSFGGGRPNVP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPG

Query:  RDPVVLGFVDFVSPAHAATAMDALQGWGVRHV
         DP++L FVDF +PA AATA+ ALQG+ V  +
Subjt:  RDPVVLGFVDFVSPAHAATAMDALQGWGVRHV

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.4e-3043.96Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG----------GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG------
        ++ +Y  + +DR +   +K   SI  +Y+RYL+S Q + +   + A P  G           +PG S+ E  + G GG + S    N R   FG      
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG----------GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG------

Query:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGW
          GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S++   DP VL FVDF + A AATA+ ALQ +
Subjt:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGW

AT1G21320.2 nucleotide binding;nucleic acid binding8.5e-3642.86Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVV-GKRPRVDYDTT----GGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG-------
        M+D YW      Q P SS P V+  KRPR D+  T       ++ +Y  + +DR +   +K   SI  +Y+RYL+S Q + +   + A P  G       
Subjt:  MSDAYWRYSDSQQQPPSSVPAVV-GKRPRVDYDTT----GGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGG-------

Query:  ---GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG-------GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDP
            +PG S+ E  + G GG + S    N R   FG        GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S++   DP
Subjt:  ---GVPGHSVNEPPIVGIGGVI-SGANVNDRSTSFG-------GGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDP

Query:  VVLGFVDFVSPAHAATAMDALQGW
         VL FVDF + A AATA+ ALQ +
Subjt:  VVLGFVDFVSPAHAATAMDALQGW

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-3546.01Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSV
        M+D YW     Q  PP        KRPR D++      T GH    YYPR +D  V        +I  +Y+RYL+S Q S  GG  S    GGG  G   
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDT-----TGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSV

Query:  NEPPI----VGIGGVIS-GANVNDRSTSFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP
        N   I    +  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +P
Subjt:  NEPPI----VGIGGVIS-GANVNDRSTSFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP

Query:  AHAATAMDALQGW
        A AATA+ ALQG+
Subjt:  AHAATAMDALQGW

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-2740.8Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI
        M+D YW     Q  PP        KRPR D+   GG                 G  +V +I++   R           GG    P+  G  GH++   P 
Subjt:  MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPI

Query:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
          +                  GR N  LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +PA AATA+ ALQG
Subjt:  VGIGGVISGANVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  W
        +
Subjt:  W

AT2G47580.1 spliceosomal protein U1A1.1e-0633.72Show/hide
Query:  GGGRPNVP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGWGVR
        GG +PN+P  P   +N LFV+ LP   T   +  +F  + G+KEVR++  +   PG     + FV+F     +  AM  LQG+ ++
Subjt:  GGGRPNVP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGWGVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACGCTTATTGGAGGTACAGCGACTCACAACAGCAACCTCCGTCGTCGGTTCCTGCCGTCGTCGGGAAGCGCCCACGCGTCGATTACGATACCACTGGTGGTCA
TGAGTTGCCCAACTACTACCCTCGTCAAGATGATAGACCAGTGCTCCAAGGAATTAAAAGTGTCGATTCTATCAATGAATCCTATGAACGTTATCTGCGCAGCTCGCAAA
TTTCGTCATATGGTGGAGGACAGTCTGCTAGACCTGTTGGTGGGGGAGTTCCTGGTCATTCGGTCAATGAACCACCAATAGTTGGGATTGGGGGTGTGATTTCAGGGGCA
AATGTTAACGATAGAAGTACAAGCTTTGGAGGTGGGAGGCCTAATGTTCCCCTGCCTCCCGATGCTTCAAATACTCTATTTGTGGAAGGCTTGCCTTCCAGCTGCACACG
ACGTGAAGTAGCTCATATATTTCGCCCCTTTGTTGGCTACAAAGAAGTGAGACTCGTTAACAAGGAATCCAGAAATCCTGGAAGAGATCCAGTGGTGCTCGGATTTGTAG
ATTTTGTAAGTCCTGCCCATGCAGCCACGGCAATGGATGCCTTACAAGGGTGGGGAGTCAGACATGTTTGGCATAGTTTAGTAGAAAACAAAGTGCAGGATGGTAGGACA
GCTGGGTGGGAATCTATGAGAAATCAGTTTGTTCTTAGTATCCTTCATGCAATTGCTCATGCAGCCACACCCCAAAGCTGGGAATACTACAGGGATGAAATGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGACGCTTATTGGAGGTACAGCGACTCACAACAGCAACCTCCGTCGTCGGTTCCTGCCGTCGTCGGGAAGCGCCCACGCGTCGATTACGATACCACTGGTGGTCA
TGAGTTGCCCAACTACTACCCTCGTCAAGATGATAGACCAGTGCTCCAAGGAATTAAAAGTGTCGATTCTATCAATGAATCCTATGAACGTTATCTGCGCAGCTCGCAAA
TTTCGTCATATGGTGGAGGACAGTCTGCTAGACCTGTTGGTGGGGGAGTTCCTGGTCATTCGGTCAATGAACCACCAATAGTTGGGATTGGGGGTGTGATTTCAGGGGCA
AATGTTAACGATAGAAGTACAAGCTTTGGAGGTGGGAGGCCTAATGTTCCCCTGCCTCCCGATGCTTCAAATACTCTATTTGTGGAAGGCTTGCCTTCCAGCTGCACACG
ACGTGAAGTAGCTCATATATTTCGCCCCTTTGTTGGCTACAAAGAAGTGAGACTCGTTAACAAGGAATCCAGAAATCCTGGAAGAGATCCAGTGGTGCTCGGATTTGTAG
ATTTTGTAAGTCCTGCCCATGCAGCCACGGCAATGGATGCCTTACAAGGGTGGGGAGTCAGACATGTTTGGCATAGTTTAGTAGAAAACAAAGTGCAGGATGGTAGGACA
GCTGGGTGGGAATCTATGAGAAATCAGTTTGTTCTTAGTATCCTTCATGCAATTGCTCATGCAGCCACACCCCAAAGCTGGGAATACTACAGGGATGAAATGAAATAG
Protein sequenceShow/hide protein sequence
MSDAYWRYSDSQQQPPSSVPAVVGKRPRVDYDTTGGHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRSSQISSYGGGQSARPVGGGVPGHSVNEPPIVGIGGVISGA
NVNDRSTSFGGGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGWGVRHVWHSLVENKVQDGRT
AGWESMRNQFVLSILHAIAHAATPQSWEYYRDEMK