; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020169 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020169
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosome hibernation promotion factor
Genome locationchr5:48536017..48538329
RNA-Seq ExpressionLag0020169
SyntenyLag0020169
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]7.5e-10588.44Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKENG AEKLEPVT+E  REPSLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]3.3e-10589.43Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGL
        IKEKDSD GRHMKGFDRLKVREPAPIVVED  EEEEVS ED GEVIDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGL
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGL

Query:  IIPKENGGAEKLEPVTVEPAREPSLAE
        IIPKENG AEKLEPVTVEPAREPSLAE
Subjt:  IIPKENGGAEKLEPVTVEPAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]1.7e-10488Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKE+G AEK+E VTVE ARE SLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

XP_022984371.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita maxima]4.4e-10588.44Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKENG AEK+E VTVE ARE SLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]1.7e-10488Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKE+G AEK+E VTVE ARE SLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic2.3e-10490.05Show/hide
Query:  VIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK
        V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEK
Subjt:  VIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKEN
        DSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKEN
Subjt:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKEN

Query:  GGAEKLEPVTVEPAREPSLAE
        G AEKLEPVTVE AREPSLAE
Subjt:  GGAEKLEPVTVEPAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP12.3e-10490.05Show/hide
Query:  VIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK
        V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEK
Subjt:  VIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKEN
        DSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKEN
Subjt:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKEN

Query:  GGAEKLEPVTVEPAREPSLAE
        G AEKLEPVTVE AREPSLAE
Subjt:  GGAEKLEPVTVEPAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic1.6e-10589.43Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGL
        IKEKDSD GRHMKGFDRLKVREPAPIVVED  EEEEVS ED GEVIDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGL
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGL

Query:  IIPKENGGAEKLEPVTVEPAREPSLAE
        IIPKENG AEKLEPVTVEPAREPSLAE
Subjt:  IIPKENGGAEKLEPVTVEPAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic8.0e-10588Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKE+G AEK+E VTVE ARE SLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic2.1e-10588.44Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V +++  + L  +E+VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII
        IKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLII
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLII

Query:  PKENGGAEKLEPVTVEPAREPSLAE
        PKENG AEK+E VTVE ARE SLAE
Subjt:  PKENGGAEKLEPVTVEPAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic6.0e-8166.52Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P + V ++L    L  S++V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+RAEEDAE++Y+SIDLVSSIIQRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQE------DGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRK
        IK+K SDHGRHMKGF+R KVR+P P+ +  EE  EEV         +  + I+E+VRTKYFDMPPLTI EA+EQL+N+DHDFY FRNEETG+INILYKRK
Subjt:  IKEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQE------DGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRK

Query:  EGGYGLIIPKENGGAEKLEPVTVEPAREPSLAE
        EGGYGLIIPK+ G  EKLE + V+  ++PS AE
Subjt:  EGGYGLIIPKENGGAEKLEPVTVEPAREPSLAE

P47908 Ribosome hibernation promotion factor1.0e-2738.58Show/hide
Query:  ILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDS
        +L+    +  +ES+  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E +YASIDLVS  I R+LRK KEK+ 
Subjt:  ILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDS

Query:  DHGRHMKGFDRLKVREPAPIVVEDE-EEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPK
            H++        + + ++ ED   + +  +   E+  E+VR KYF MPP+TI+EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DHGRHMKGFDRLKVREPAPIVVEDE-EEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPK

P74518 Ribosome hibernation promotion factor1.3e-3041.67Show/hide
Query:  ILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE
        +L+    +  +E++  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E +YASIDLV+  I R+LRK KE
Subjt:  ILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE

Query:  K--DSDHGRHMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI
        +  D  HG        +K  E    +VED+  EE +  +   E+  E++R KYF MPP+ IE+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I
Subjt:  K--DSDHGRHMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI

Query:  IPKE
         P +
Subjt:  IPKE

Q4L4H7 Ribosome hibernation promotion factor2.3e-1632.12Show/hide
Query:  LYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK-DSDHGRHM
        L  +++++ ++E+K+GK ++++ + V      + V+  +        + EVT+   K+  +RAEE  + +YA IDLV+S ++R++RK K + +  H  H 
Subjt:  LYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK-DSDHGRHM

Query:  KGFDRLKVREPAPIVVEDEE------EEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI
                 EP   V E +E      ++V+ E   +   EI+R+K F + P+  EEA+ Q++ + HDFY F + ET   +I+YKRK+G YGLI
Subjt:  KGFDRLKVREPAPIVVEDEE------EEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI

Q9RVE7 Ribosome hibernation promotion factor8.0e-1731.98Show/hide
Query:  IILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE--
        I  LS   +  +E ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++RAEE    +YA+ID  S +++R+LRK K   
Subjt:  IILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE--

Query:  -KDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI
         K    GR         +  PA   V  +    + +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R++G YGLI
Subjt:  -KDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative5.2e-8872.73Show/hide
Query:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK
        P A V +++  + L  SE +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYA IDLVS+IIQRKLRK
Subjt:  PSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRK

Query:  IKEKDSDHGRHMKGFDRLKVREPA-PIVVEDEEEEV-----SQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEG
        IKEKDSDHGRHMKGF+RLKVREP    VVED E+        +E+  ++I EIVRTK F+MPPLT+ EA+EQL+ + HDFYGF+NEETGEINI+YKRKEG
Subjt:  IKEKDSDHGRHMKGFDRLKVREPA-PIVVEDEEEEV-----SQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEG

Query:  GYGLIIPKENGGAEKLEPVTVEPAREPSLAE
        GYGLIIPK++G AEK+EP+  E   E S AE
Subjt:  GYGLIIPKENGGAEKLEPVTVEPAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCCTCTGCGCATATGTGAGAATATCACCTTCTGCTGTTGTAATTATCCTACTTTCCACTGAGCCCCTGTACACCTCTGAATCGGTTAAGAAGCATGTGGAAGA
GAAGGTTGGCAAGGCCGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCG
AGGTTACTTTATTCACAAAGAAGCATGGAGTTGTGCGGGCAGAGGAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGA
AAAATTAAAGAGAAAGATTCAGACCATGGCCGACATATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAAGAAGTTTC
TCAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTACGGACAAAATACTTTGATATGCCACCTTTGACCATTGAAGAAGCAATCGAACAACTCAAAAATATTGACCATG
ATTTCTATGGTTTCCGCAATGAAGAAACTGGTGAGATTAATATCTTATATAAAAGAAAGGAGGGAGGATATGGACTTATCATCCCAAAAGAAAATGGTGGAGCTGAGAAA
TTAGAACCTGTGACAGTTGAACCTGCCCGAGAACCTTCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCCTCTGCGCATATGTGAGAATATCACCTTCTGCTGTTGTAATTATCCTACTTTCCACTGAGCCCCTGTACACCTCTGAATCGGTTAAGAAGCATGTGGAAGA
GAAGGTTGGCAAGGCCGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCG
AGGTTACTTTATTCACAAAGAAGCATGGAGTTGTGCGGGCAGAGGAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGA
AAAATTAAAGAGAAAGATTCAGACCATGGCCGACATATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAAGAAGTTTC
TCAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTACGGACAAAATACTTTGATATGCCACCTTTGACCATTGAAGAAGCAATCGAACAACTCAAAAATATTGACCATG
ATTTCTATGGTTTCCGCAATGAAGAAACTGGTGAGATTAATATCTTATATAAAAGAAAGGAGGGAGGATATGGACTTATCATCCCAAAAGAAAATGGTGGAGCTGAGAAA
TTAGAACCTGTGACAGTTGAACCTGCCCGAGAACCTTCCTTGGCGGAATGA
Protein sequenceShow/hide protein sequence
MFFLCAYVRISPSAVVIILLSTEPLYTSESVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLR
KIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEK
LEPVTVEPAREPSLAE