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Lag0020185 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020185
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionendonuclease MutS2 isoform X1
Genome locationchr5:48645455..48649009
RNA-Seq ExpressionLag0020185
SyntenyLag0020185
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004519 - endonuclease activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030983 - mismatched DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576609.1 hypothetical protein SDJN03_24183, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2881.11Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV NVSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
KAG7014662.1 mutS2 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2881.11Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV NVSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
XP_022922841.1 uncharacterized protein LOC111430703 isoform X2 [Cucurbita moschata]4.8e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
XP_022922843.1 uncharacterized protein LOC111430703 isoform X3 [Cucurbita moschata]4.8e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
XP_023552491.1 uncharacterized protein LOC111810138 [Cucurbita pepo subsp. pepo]1.3e-2881.11Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV NVSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
TrEMBL top hitse value%identityAlignment
A0A6J1CI69 uncharacterized protein LOC111011726 isoform X42.3e-2876.6Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATS--VHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVKLK
        +LSAA+F  PLTSIISA LPVKN++S RFQ++  S  + FSLSA NSVSN I DDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATS--VHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVKLK
A0A6J1E4M8 uncharacterized protein LOC111430703 isoform X42.3e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
A0A6J1E586 uncharacterized protein LOC111430703 isoform X22.3e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
A0A6J1E7X9 uncharacterized protein LOC111430703 isoform X32.3e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
A0A6J1E9Y4 uncharacterized protein LOC111430703 isoform X12.3e-2880Show/hide
Query:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
        MLSAA+F H LT I SATLPV +VSSFRFQ++A  VHFSLSAN SV N IR DRN+HSIHLDSLRALEWDKLCDSVASFARTSLGR+A+K
Subjt:  MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54090.1 DNA mismatch repair protein MutS, type 22.7e-0873.68Show/hide
Query:  NKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVKLK
        +K     DSLR LEWDKLCD VASFARTSLGREA K K
Subjt:  NKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTGCAGCTCTTTTTCGCCATCCCCTCACCTCCATTATCTCTGCTACACTGCCGGTTAAAAACGTCAGTTCGTTCAGATTTCAGAGTCAAGCTACATCCGTACA
CTTCTCCCTCTCTGCAAACAACTCCGTCAGCAATGGCATTAGAGATGACAGAAACAAACATTCAATCCACCTCGATAGTCTCAGAGCGCTGGAATGGGATAAACTTTGCG
ATTCCGTAGCTTCCTTCGCTCGCACTTCTCTGGGCCGTGAAGCTGTCAAGCTCAAACCATTTGAAGATCGAGAGATGGGCAGAAGAGAAACATTGCAAGCCAATGTTAGT
TGTTGGATTGGATTGTCGCTCGACTTCATATTGAAGTCAAGAGAAATTCTTTTGGCTTTGTCCCTGCAGAAATTGAAATTAAGGACGCTTTCATCAATCCTCCCTTCTCT
TTTGTCCTCGGATGAAGAAGAAATTTCTGATCAAGATGAATTAAATGCACAGAGGTTTTTTCCTTCCAGTGAGCAGTTGGCAGTGAATGAGGCCATTAATGGTCAGAAGT
CGAACAATTTCCCTTCAAATGAGAGATTGTTTATTTATGATAAGATGATTGAAGCCACTACCAGTACATTTGGGTGCAAATATGGCGAATGGCCGAGCTTTTACTTGGGC
CTCCCTCTCCATGGGTCTCCAAGAACCTCTTCCTTTTGGACCCCTATTATTGAGAAGATAGAGAGGAGGCTATCAACTTGGGATCATCTTTTATTTCCAAGGGAAGTTGA
CTCATTCTTCTTCAAGCCATCTTCTTCAAGTCACCTTAGCAAACCTCCCAACATATTACCTTTCACTCTTCACTATGCCGACCTGTATAGAAGTGGATTCTGTGAGGCCA
AAGAGGATTCAGACCACCAAGGATCCATCCAAAAGGGTATTGTTCCACCATCTCCCATGAGATTCCTTGATGCTATAATGAACTTCCCAATTGATGACCAACAAGCTTCT
GTTTTAGTGGTAGTTTTTACCGAGGAAGAAGTTTGGAAGGCTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTGCAGCTCTTTTTCGCCATCCCCTCACCTCCATTATCTCTGCTACACTGCCGGTTAAAAACGTCAGTTCGTTCAGATTTCAGAGTCAAGCTACATCCGTACA
CTTCTCCCTCTCTGCAAACAACTCCGTCAGCAATGGCATTAGAGATGACAGAAACAAACATTCAATCCACCTCGATAGTCTCAGAGCGCTGGAATGGGATAAACTTTGCG
ATTCCGTAGCTTCCTTCGCTCGCACTTCTCTGGGCCGTGAAGCTGTCAAGCTCAAACCATTTGAAGATCGAGAGATGGGCAGAAGAGAAACATTGCAAGCCAATGTTAGT
TGTTGGATTGGATTGTCGCTCGACTTCATATTGAAGTCAAGAGAAATTCTTTTGGCTTTGTCCCTGCAGAAATTGAAATTAAGGACGCTTTCATCAATCCTCCCTTCTCT
TTTGTCCTCGGATGAAGAAGAAATTTCTGATCAAGATGAATTAAATGCACAGAGGTTTTTTCCTTCCAGTGAGCAGTTGGCAGTGAATGAGGCCATTAATGGTCAGAAGT
CGAACAATTTCCCTTCAAATGAGAGATTGTTTATTTATGATAAGATGATTGAAGCCACTACCAGTACATTTGGGTGCAAATATGGCGAATGGCCGAGCTTTTACTTGGGC
CTCCCTCTCCATGGGTCTCCAAGAACCTCTTCCTTTTGGACCCCTATTATTGAGAAGATAGAGAGGAGGCTATCAACTTGGGATCATCTTTTATTTCCAAGGGAAGTTGA
CTCATTCTTCTTCAAGCCATCTTCTTCAAGTCACCTTAGCAAACCTCCCAACATATTACCTTTCACTCTTCACTATGCCGACCTGTATAGAAGTGGATTCTGTGAGGCCA
AAGAGGATTCAGACCACCAAGGATCCATCCAAAAGGGTATTGTTCCACCATCTCCCATGAGATTCCTTGATGCTATAATGAACTTCCCAATTGATGACCAACAAGCTTCT
GTTTTAGTGGTAGTTTTTACCGAGGAAGAAGTTTGGAAGGCTATTTAG
Protein sequenceShow/hide protein sequence
MLSAALFRHPLTSIISATLPVKNVSSFRFQSQATSVHFSLSANNSVSNGIRDDRNKHSIHLDSLRALEWDKLCDSVASFARTSLGREAVKLKPFEDREMGRRETLQANVS
CWIGLSLDFILKSREILLALSLQKLKLRTLSSILPSLLSSDEEEISDQDELNAQRFFPSSEQLAVNEAINGQKSNNFPSNERLFIYDKMIEATTSTFGCKYGEWPSFYLG
LPLHGSPRTSSFWTPIIEKIERRLSTWDHLLFPREVDSFFFKPSSSSHLSKPPNILPFTLHYADLYRSGFCEAKEDSDHQGSIQKGIVPPSPMRFLDAIMNFPIDDQQAS
VLVVVFTEEEVWKAI