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Lag0020189 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020189
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionendonuclease MutS2 isoform X1
Genome locationchr5:48699993..48701462
RNA-Seq ExpressionLag0020189
SyntenyLag0020189
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004519 - endonuclease activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030983 - mismatched DNA binding (molecular function)
InterPro domainsIPR045076 - DNA mismatch repair MutS family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576609.1 hypothetical protein SDJN03_24183, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
KAG7014662.1 mutS2 [Cucurbita argyrosperma subsp. argyrosperma]8.1e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
XP_022985051.1 uncharacterized protein LOC111483140 isoform X2 [Cucurbita maxima]6.2e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
XP_022985053.1 uncharacterized protein LOC111483140 isoform X4 [Cucurbita maxima]6.2e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
XP_023552491.1 uncharacterized protein LOC111810138 [Cucurbita pepo subsp. pepo]8.1e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
TrEMBL top hitse value%identityAlignment
A0A6J1CK29 uncharacterized protein LOC111011726 isoform X34.4e-1983.08Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        +A GIGTILEPLSAVPLNDELQ+ARASV KAEEDVLFML+EKVKM+LEDI KLIDCII+LD++ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
A0A6J1E4M8 uncharacterized protein LOC111430703 isoform X45.2e-2086.15Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGT+LEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
A0A6J1E586 uncharacterized protein LOC111430703 isoform X25.2e-2086.15Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGT+LEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
A0A6J1J709 uncharacterized protein LOC111483140 isoform X23.0e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
A0A6J1JCF6 uncharacterized protein LOC111483140 isoform X43.0e-2087.69Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
        SAAGIGTILEPLSAVPLNDELQ+ARA+V KAEEDVLFMLTEKVKM+ EDINKLI CIIELDV+ A
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54090.1 DNA mismatch repair protein MutS, type 21.4e-0951.47Show/hide
Query:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPAMTT
        S +G GT  EP++AV +ND+LQ ARASV KAE ++L MLTEK++  L  I  ++   I+LDVI A  T
Subjt:  SAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPAMTT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGTTGTAGTGCTGCAGGGATTGGTACCATCCTAGAGCCACTGTCTGCCGTTCCTTTAAACGATGAGTTGCAACGAGCGAGGGCATCAGTGGAAAAAGCTGAGGA
AGATGTTCTCTTTATGCTAACTGAAAAAGTGAAAATGGAACTTGAAGACATTAATAAACTTATTGACTGTATAATTGAATTAGATGTGATTCCGGCCATGACCACCACCA
CCTCCACCACAACACCATGGAACGACTCCATTATATCAATCTATATTGATCGGAAATCCTTCACCATTGAATTTGATGAATCTTTTAGGGGAAGTCGAGCAAAAATTACA
GAACATAGTAGGGCCTCTTCCCATTCCTTATCCCTCTCATGGAAGTCCCTCAACTGTCTTGCATCCTTCTTCAATACTCTTGCCCATCAACCGTGCTCGTTCAAATTTTC
CTCTAAGATCAATATGTACTTTGGTTGGAAAAACTCAGCAATAAATATGGCTTCTTTGTGGAGATTAATCAGTTGCAGAATTTTGGTGTCGGCGTCGGCTCCTCATACCA
TACGAGGAAAACAAGGAAGGATGGTTCTTCTTCTTCTCCCTCATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGTTGTAGTGCTGCAGGGATTGGTACCATCCTAGAGCCACTGTCTGCCGTTCCTTTAAACGATGAGTTGCAACGAGCGAGGGCATCAGTGGAAAAAGCTGAGGA
AGATGTTCTCTTTATGCTAACTGAAAAAGTGAAAATGGAACTTGAAGACATTAATAAACTTATTGACTGTATAATTGAATTAGATGTGATTCCGGCCATGACCACCACCA
CCTCCACCACAACACCATGGAACGACTCCATTATATCAATCTATATTGATCGGAAATCCTTCACCATTGAATTTGATGAATCTTTTAGGGGAAGTCGAGCAAAAATTACA
GAACATAGTAGGGCCTCTTCCCATTCCTTATCCCTCTCATGGAAGTCCCTCAACTGTCTTGCATCCTTCTTCAATACTCTTGCCCATCAACCGTGCTCGTTCAAATTTTC
CTCTAAGATCAATATGTACTTTGGTTGGAAAAACTCAGCAATAAATATGGCTTCTTTGTGGAGATTAATCAGTTGCAGAATTTTGGTGTCGGCGTCGGCTCCTCATACCA
TACGAGGAAAACAAGGAAGGATGGTTCTTCTTCTTCTCCCTCATCTCTGA
Protein sequenceShow/hide protein sequence
MYCCSAAGIGTILEPLSAVPLNDELQRARASVEKAEEDVLFMLTEKVKMELEDINKLIDCIIELDVIPAMTTTTSTTTPWNDSIISIYIDRKSFTIEFDESFRGSRAKIT
EHSRASSHSLSLSWKSLNCLASFFNTLAHQPCSFKFSSKINMYFGWKNSAINMASLWRLISCRILVSASAPHTIRGKQGRMVLLLLPHL